RNA–Protein interactions for RNA: ENST00000470183.1

RPGR-205, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-205ENST00000470183 LINC01546A6NGU7 62 aa0.55□□□□□ -2.32
RPGR-205ENST00000470183 DEFB130BP0DP73 79 aa0.55□□□□□ -2.32
RPGR-205ENST00000470183 DEFB130AP0DP74 79 aa0.55□□□□□ -2.32
RPGR-205ENST00000470183 TIMM8BQ9Y5J9 83 aaPredicted RBP0.55□□□□□ -2.32
RPGR-205ENST00000470183 USP24Q9UPU5 2620 aa0.55□□□□□ -2.32
RPGR-205ENST00000470183 SPTBN2O15020 2390 aa0.55□□□□□ -2.32
RPGR-205ENST00000470183 TLN1Q9Y490 2541 aaKnown RBP0.55□□□□□ -2.32
RPGR-205ENST00000470183 AHNAK2Q8IVF2 5795 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 DNAH14Q0VDD8 3507 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 WDFY4Q6ZS81 3184 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 CREBBPQ92793 2442 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 SMIM27A0A1W2PRY6 76 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 SPART-AS1P0CW21 52 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 APELAP0DMC3 54 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 DEFB131AP59861 70 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 DEFB136Q30KP8 78 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 C6orf48Q9UBA6 75 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 ZNF292O60281 2723 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 NAV2Q8IVL1 2488 aa0.54□□□□□ -2.32
RPGR-205ENST00000470183 MYO18BQ8IUG5 2567 aa0.53□□□□□ -2.32
RPGR-205ENST00000470183 SPTBN4Q9H254 2564 aa0.53□□□□□ -2.32
RPGR-205ENST00000470183 LAMA2P24043 3122 aaKnown RBP0.53□□□□□ -2.32
RPGR-205ENST00000470183 ANKRD11Q6UB99 2663 aaPredicted RBP0.53□□□□□ -2.32
RPGR-205ENST00000470183 NBASA2RRP1 2371 aa0.53□□□□□ -2.32
RPGR-205ENST00000470183 SPTBN5Q9NRC6 3674 aaKnown RBP0.53□□□□□ -2.32
RPGR-205ENST00000470183 DEFB135Q30KP9 77 aa0.53□□□□□ -2.32
RPGR-205ENST00000470183 LINC01556Q5JQF7 62 aa0.53□□□□□ -2.32
RPGR-205ENST00000470183 SMIM2Q9BVW6 85 aa0.53□□□□□ -2.32
RPGR-205ENST00000470183 VPS13AQ96RL7 3174 aa0.53□□□□□ -2.33
RPGR-205ENST00000470183 LOC400499M0QZD8 3231 aa0.53□□□□□ -2.33
RPGR-205ENST00000470183 MUC5ACP98088 5654 aa0.53□□□□□ -2.33
RPGR-205ENST00000470183 SPEGQ15772 3267 aa0.53□□□□□ -2.33
RPGR-205ENST00000470183 PTPN13Q12923 2485 aa0.53□□□□□ -2.33
RPGR-205ENST00000470183 MYO15AQ9UKN7 3530 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 CSPG4Q6UVK1 2322 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 F8P00451 2351 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 C2CD3Q4AC94 2353 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 M0QY20 66 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 SPINK1P00995 79 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 HTN1P15515 57 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 POLR2KP53803 58 aaKnown RBP0.52□□□□□ -2.33
RPGR-205ENST00000470183 LINC00308Q8TCZ7 52 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 NOP10Q9NPE3 64 aaKnown RBP0.52□□□□□ -2.33
RPGR-205ENST00000470183 ABCA12Q86UK0 2595 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 FREM2Q5SZK8 3169 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 WDFY3Q8IZQ1 3526 aa0.52□□□□□ -2.33
RPGR-205ENST00000470183 SPTAN1Q13813 2472 aaKnown RBP0.52□□□□□ -2.33
RPGR-205ENST00000470183 CELSR3Q9NYQ7 3312 aa0.51□□□□□ -2.33
RPGR-205ENST00000470183 A0A096LPF7 62 aa0.51□□□□□ -2.33
RPGR-205ENST00000470183 MYO9AB2RTY4 2548 aa0.51□□□□□ -2.33
RPGR-205ENST00000470183 USP9YO00507 2555 aaPredicted RBP0.51□□□□□ -2.33
RPGR-205ENST00000470183 NDUFA1O15239 70 aa0.51□□□□□ -2.33
RPGR-205ENST00000470183 UBR5O95071 2799 aaPredicted RBP0.51□□□□□ -2.33
RPGR-205ENST00000470183 USP9XQ93008 2570 aaPredicted RBP0.51□□□□□ -2.33
RPGR-205ENST00000470183 CFAP54Q96N23 3096 aa0.51□□□□□ -2.33
RPGR-205ENST00000470183 EPG5Q9HCE0 2579 aa0.51□□□□□ -2.33
RPGR-205ENST00000470183 CHD8Q9HCK8 2581 aa0.51□□□□□ -2.33
RPGR-205ENST00000470183 DMXL1Q9Y485 3027 aa0.51□□□□□ -2.33
RPGR-205ENST00000470183 TRIOO75962 3097 aa0.51□□□□□ -2.33
RPGR-205ENST00000470183 LRRK2Q5S007 2527 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 SPG11Q96JI7 2443 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 WNK1Q9H4A3 2382 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 ASPMQ8IZT6 3477 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 LAMA1P25391 3075 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 AKAP13Q12802 2813 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 TENM4Q6N022 2769 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 IGSF10Q6WRI0 2623 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 HTN3P15516 51 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 DEFB1P60022 68 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 RPL39LQ96EH5 51 aaKnown RBP0.5□□□□□ -2.33
RPGR-205ENST00000470183 FASNP49327 2511 aaKnown RBP0.5□□□□□ -2.33
RPGR-205ENST00000470183 MGAQ8IWI9 3026 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 BSNQ9UPA5 3926 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 ITPR3Q14573 2671 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 CEP295Q9C0D2 2601 aa0.5□□□□□ -2.33
RPGR-205ENST00000470183 CCDC168Q8NDH2 2452 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 SONP18583 2426 aaKnown RBP0.49□□□□□ -2.33
RPGR-205ENST00000470183 FRAS1Q86XX4 4008 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 FRYLO94915 3013 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 WDR87Q6ZQQ6 2873 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 FLNAP21333 2647 aaKnown RBP0.49□□□□□ -2.33
RPGR-205ENST00000470183 UNC79Q9P2D8 2635 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 DEFB4AO15263 64 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 RPL39P62891 51 aaKnown RBP0.49□□□□□ -2.33
RPGR-205ENST00000470183 WFDC10BQ8IUB3 73 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 ATMQ13315 3056 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 BOD1L1Q8NFC6 3051 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 RELNP78509 3460 aa0.49□□□□□ -2.33
RPGR-205ENST00000470183 ZFYVE26Q68DK2 2539 aa0.48□□□□□ -2.33
RPGR-205ENST00000470183 FRYQ5TBA9 3013 aa0.48□□□□□ -2.33
RPGR-205ENST00000470183 DMXL2Q8TDJ6 3036 aa0.48□□□□□ -2.33
RPGR-205ENST00000470183 ACANP16112 2415 aa0.48□□□□□ -2.33
RPGR-205ENST00000470183 PDZD2O15018 2839 aa0.48□□□□□ -2.33
RPGR-205ENST00000470183 CFAP47Q6ZTR5 3102 aa0.48□□□□□ -2.33
RPGR-205ENST00000470183 NSD1Q96L73 2696 aaPredicted RBP0.48□□□□□ -2.33
RPGR-205ENST00000470183 RPS29P62273 56 aaKnown RBP0.48□□□□□ -2.33
RPGR-205ENST00000470183 CLPSL2Q6UWE3 100 aa0.48□□□□□ -2.33
RPGR-205ENST00000470183 TOMM7Q9P0U1 55 aa0.48□□□□□ -2.33
RPGR-205ENST00000470183 CFAP46Q8IYW2 2715 aa0.48□□□□□ -2.33
RPGR-205ENST00000470183 ADGRG4Q8IZF6 3080 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms