RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
SHROOM3-203ENST00000469923 TMEM256-PLSCR3K7ERE1 68 aa4.76□□□□□ -1.65
SHROOM3-203ENST00000469923 GHRHP01286 108 aa4.76□□□□□ -1.65
SHROOM3-203ENST00000469923 M0R2T5 61 aa4.73□□□□□ -1.65
SHROOM3-203ENST00000469923 Q75L30 129 aa4.73□□□□□ -1.65
SHROOM3-203ENST00000469923 A8MUU9 505 aa4.72□□□□□ -1.65
SHROOM3-203ENST00000469923 COX6B2Q6YFQ2 88 aa4.72□□□□□ -1.65
SHROOM3-203ENST00000469923 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
SHROOM3-203ENST00000469923 SS18L2Q9UHA2 77 aa4.72□□□□□ -1.65
SHROOM3-203ENST00000469923 TRBV7-4A0A0J9YYF1 115 aa4.71□□□□□ -1.66
SHROOM3-203ENST00000469923 JMJD7-PLA2G4BH0Y9G9 81 aa4.71□□□□□ -1.66
SHROOM3-203ENST00000469923 CCKP06307 115 aa4.71□□□□□ -1.66
SHROOM3-203ENST00000469923 RBM3P98179 157 aaKnown RBP4.7□□□□□ -1.66
SHROOM3-203ENST00000469923 ATP11AUNQ6ZP68 121 aa4.7□□□□□ -1.66
SHROOM3-203ENST00000469923 C20orf166-AS1Q96NR2 134 aa4.7□□□□□ -1.66
SHROOM3-203ENST00000469923 VPS25Q9BRG1 176 aa4.7□□□□□ -1.66
SHROOM3-203ENST00000469923 IGKV4-1P06312 121 aa4.69□□□□□ -1.66
SHROOM3-203ENST00000469923 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
SHROOM3-203ENST00000469923 J3QR89 54 aa4.68□□□□□ -1.66
SHROOM3-203ENST00000469923 K7ERU9 68 aa4.68□□□□□ -1.66
SHROOM3-203ENST00000469923 DSCR8Q96T75 97 aa4.68□□□□□ -1.66
SHROOM3-203ENST00000469923 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
SHROOM3-203ENST00000469923 LOC110117498A0A087WWA1 95 aa4.67□□□□□ -1.66
SHROOM3-203ENST00000469923 Q6ZQT0 140 aa4.67□□□□□ -1.66
SHROOM3-203ENST00000469923 SIGMAR1Q99720 223 aa4.67□□□□□ -1.66
SHROOM3-203ENST00000469923 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.66
SHROOM3-203ENST00000469923 PDE6GP18545 87 aa4.65□□□□□ -1.67
SHROOM3-203ENST00000469923 LINC00313P59037 77 aa4.65□□□□□ -1.67
SHROOM3-203ENST00000469923 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
SHROOM3-203ENST00000469923 FAM240AA0A1B0GVK7 77 aa4.63□□□□□ -1.67
SHROOM3-203ENST00000469923 HRES1P13985 223 aa4.63□□□□□ -1.67
SHROOM3-203ENST00000469923 C21orf62-AS1Q17RA5 79 aa4.63□□□□□ -1.67
SHROOM3-203ENST00000469923 ACYP1P07311 99 aa4.62□□□□□ -1.67
SHROOM3-203ENST00000469923 MT2AP02795 61 aa4.61□□□□□ -1.67
SHROOM3-203ENST00000469923 MPLKIPQ8TAP9 179 aa4.6□□□□□ -1.67
SHROOM3-203ENST00000469923 LINC00846Q9NV44 126 aa4.6□□□□□ -1.67
SHROOM3-203ENST00000469923 A0A1B0GVX0 72 aa4.59□□□□□ -1.67
SHROOM3-203ENST00000469923 MT1FP04733 61 aa4.59□□□□□ -1.67
SHROOM3-203ENST00000469923 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
SHROOM3-203ENST00000469923 A0A1B0GW54 56 aa4.57□□□□□ -1.68
SHROOM3-203ENST00000469923 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
SHROOM3-203ENST00000469923 LCE2BO14633 110 aa4.57□□□□□ -1.68
SHROOM3-203ENST00000469923 J3KT08 172 aa4.56□□□□□ -1.68
SHROOM3-203ENST00000469923 UBL5Q9BZL1 73 aa4.56□□□□□ -1.68
SHROOM3-203ENST00000469923 IGKV3D-7A0A0C4DH55 119 aa4.55□□□□□ -1.68
SHROOM3-203ENST00000469923 C8orf87E5RJ46 101 aa4.55□□□□□ -1.68
SHROOM3-203ENST00000469923 NREPQ16612 68 aa4.55□□□□□ -1.68
SHROOM3-203ENST00000469923 Q6ZVQ6 151 aa4.55□□□□□ -1.68
SHROOM3-203ENST00000469923 LINC00643Q86TS7 51 aa4.54□□□□□ -1.68
SHROOM3-203ENST00000469923 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
SHROOM3-203ENST00000469923 A8MWP4 228 aa4.53□□□□□ -1.68
SHROOM3-203ENST00000469923 NDUFB1O75438 58 aa4.53□□□□□ -1.68
SHROOM3-203ENST00000469923 MT-ATP8P03928 68 aa4.53□□□□□ -1.68
SHROOM3-203ENST00000469923 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.68
SHROOM3-203ENST00000469923 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
SHROOM3-203ENST00000469923 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
SHROOM3-203ENST00000469923 SPINK7P58062 85 aa4.51□□□□□ -1.69
SHROOM3-203ENST00000469923 ATP5EP2Q5VTU8 51 aa4.51□□□□□ -1.69
SHROOM3-203ENST00000469923 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
SHROOM3-203ENST00000469923 PRR15Q8IV56 129 aa4.5□□□□□ -1.69
SHROOM3-203ENST00000469923 ZCCHC13Q8WW36 166 aaKnown RBP4.5□□□□□ -1.69
SHROOM3-203ENST00000469923 BPY2O14599 106 aa4.49□□□□□ -1.69
SHROOM3-203ENST00000469923 KRTAP10-10P60014 251 aa4.49□□□□□ -1.69
SHROOM3-203ENST00000469923 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
SHROOM3-203ENST00000469923 K7EQZ3 153 aa4.48□□□□□ -1.69
SHROOM3-203ENST00000469923 CXCL6P80162 114 aa4.48□□□□□ -1.69
SHROOM3-203ENST00000469923 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
SHROOM3-203ENST00000469923 Q8N9L7 120 aa4.46□□□□□ -1.7
SHROOM3-203ENST00000469923 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
SHROOM3-203ENST00000469923 HIST1H4AP62805 103 aaKnown RBP4.45□□□□□ -1.7
SHROOM3-203ENST00000469923 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
SHROOM3-203ENST00000469923 A0A087WVE0 104 aa4.44□□□□□ -1.7
SHROOM3-203ENST00000469923 Q5W150 140 aa4.44□□□□□ -1.7
SHROOM3-203ENST00000469923 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
SHROOM3-203ENST00000469923 IMUPQ9GZP8 106 aa4.44□□□□□ -1.7
SHROOM3-203ENST00000469923 RBM12B-AS1Q9P1G2 102 aa4.44□□□□□ -1.7
SHROOM3-203ENST00000469923 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
SHROOM3-203ENST00000469923 NDUFS5O43920 106 aa4.42□□□□□ -1.7
SHROOM3-203ENST00000469923 WFDC13Q8IUB5 93 aa4.42□□□□□ -1.7
SHROOM3-203ENST00000469923 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
SHROOM3-203ENST00000469923 FAM236AA0A1B0GUQ0 79 aa4.39□□□□□ -1.71
SHROOM3-203ENST00000469923 FAM236BA0A1B0GV22 79 aa4.39□□□□□ -1.71
SHROOM3-203ENST00000469923 CASC2Q6XLA1 102 aa4.38□□□□□ -1.71
SHROOM3-203ENST00000469923 HCG22E2RYF7 251 aa4.37□□□□□ -1.71
SHROOM3-203ENST00000469923 SCGB1A1P11684 91 aa4.37□□□□□ -1.71
SHROOM3-203ENST00000469923 IGKV2D-30A0A075B6S6 120 aa4.34□□□□□ -1.71
SHROOM3-203ENST00000469923 IGKV2-30P06310 120 aa4.34□□□□□ -1.71
SHROOM3-203ENST00000469923 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.71
SHROOM3-203ENST00000469923 ATOX1O00244 68 aa4.33□□□□□ -1.72
SHROOM3-203ENST00000469923 C4orf26Q17RF5 130 aa4.31□□□□□ -1.72
SHROOM3-203ENST00000469923 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
SHROOM3-203ENST00000469923 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
SHROOM3-203ENST00000469923 ANAPC13Q9BS18 74 aa4.3□□□□□ -1.72
SHROOM3-203ENST00000469923 C7orf65Q6ZTY9 151 aa4.29□□□□□ -1.72
SHROOM3-203ENST00000469923 SMIM20Q8N5G0 67 aa4.29□□□□□ -1.72
SHROOM3-203ENST00000469923 TRAV7A0A075B6U4 112 aa4.28□□□□□ -1.72
SHROOM3-203ENST00000469923 OCR1Q9BZK8 76 aa4.28□□□□□ -1.72
SHROOM3-203ENST00000469923 SERP2Q8N6R1 65 aa4.27□□□□□ -1.73
SHROOM3-203ENST00000469923 UQCRQO14949 82 aa4.25□□□□□ -1.73
SHROOM3-203ENST00000469923 COX7CP15954 63 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms