RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 HEPN1Q6WQI6 88 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 MRPL34Q9BQ48 92 aaKnown RBP0.36□□□□□ -2.35
VPS8-220ENST00000469713 MAGI3Q5TCQ9 1506 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 WIZO95785 1651 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 PREX1Q8TCU6 1659 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 KNL1Q8NG31 2342 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 HECTD4Q9Y4D8 3996 aa0.36□□□□□ -2.35
VPS8-220ENST00000469713 AKAP9Q99996 3911 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 DUOX2Q9NRD8 1548 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 COX8AP10176 69 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 H1FX-AS1Q4G0G2 97 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 DEFB105AQ8NG35 78 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 FXYD6Q9H0Q3 95 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 PRO3102Q9H379 93 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 CCDC141Q6ZP82 1450 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 AKAP6Q13023 2319 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 ABCA9Q8IUA7 1624 aa0.35□□□□□ -2.35
VPS8-220ENST00000469713 PKD1P98161 4303 aa0.34□□□□□ -2.35
VPS8-220ENST00000469713 LCE6AA0A183 80 aa0.34□□□□□ -2.36
VPS8-220ENST00000469713 CLIP1P30622 1438 aa0.34□□□□□ -2.36
VPS8-220ENST00000469713 TJP1Q07157 1748 aa0.34□□□□□ -2.36
VPS8-220ENST00000469713 DIP2AQ14689 1571 aa0.34□□□□□ -2.36
VPS8-220ENST00000469713 NWD1Q149M9 1564 aa0.34□□□□□ -2.36
VPS8-220ENST00000469713 DEFB109BQ30KR1 87 aa0.34□□□□□ -2.36
VPS8-220ENST00000469713 CDC42BPGQ6DT37 1551 aa0.34□□□□□ -2.36
VPS8-220ENST00000469713 NRAPQ86VF7 1730 aa0.34□□□□□ -2.36
VPS8-220ENST00000469713 MROH1Q8NDA8 1641 aa0.34□□□□□ -2.36
VPS8-220ENST00000469713 TNRC6CQ9HCJ0 1690 aaKnown RBP0.33□□□□□ -2.36
VPS8-220ENST00000469713 ASXL1Q8IXJ9 1541 aa0.33□□□□□ -2.36
VPS8-220ENST00000469713 DDX60LQ5H9U9 1706 aaKnown RBP0.33□□□□□ -2.36
VPS8-220ENST00000469713 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
VPS8-220ENST00000469713 PRKDCP78527 4128 aaKnown RBP0.33□□□□□ -2.36
VPS8-220ENST00000469713 NDUFA4O00483 81 aa0.33□□□□□ -2.36
VPS8-220ENST00000469713 LYSTQ99698 3801 aa0.33□□□□□ -2.36
VPS8-220ENST00000469713 LRP1BQ9NZR2 4599 aa0.33□□□□□ -2.36
VPS8-220ENST00000469713 C4AP0C0L4 1744 aa0.33□□□□□ -2.36
VPS8-220ENST00000469713 C4BP0C0L5 1744 aa0.33□□□□□ -2.36
VPS8-220ENST00000469713 LRP2P98164 4655 aa0.32□□□□□ -2.36
VPS8-220ENST00000469713 EIF2AK4Q9P2K8 1649 aaKnown RBP0.32□□□□□ -2.36
VPS8-220ENST00000469713 GOLGA4Q13439 2230 aaKnown RBP0.32□□□□□ -2.36
VPS8-220ENST00000469713 NDUFA3O95167 84 aa0.32□□□□□ -2.36
VPS8-220ENST00000469713 RPL38P63173 70 aaKnown RBP0.32□□□□□ -2.36
VPS8-220ENST00000469713 LMTK2Q8IWU2 1503 aa0.32□□□□□ -2.36
VPS8-220ENST00000469713 RALGAPBQ86X10 1494 aa0.31□□□□□ -2.36
VPS8-220ENST00000469713 SPINK1P00995 79 aa0.31□□□□□ -2.36
VPS8-220ENST00000469713 LRP1Q07954 4544 aaKnown RBP0.31□□□□□ -2.36
VPS8-220ENST00000469713 DYNC1H1Q14204 4646 aaKnown RBP0.31□□□□□ -2.36
VPS8-220ENST00000469713 CMYA5Q8N3K9 4069 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 SMIM31A0A1B0GVY4 71 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 CCL22O00626 93 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 ATXN8Q156A1 80 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 ENHOQ6UWT2 76 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 WFDC13Q8IUB5 93 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 GNG13Q9P2W3 67 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 CDKN2A-AS1Q9UH64 79 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 SACSQ9NZJ4 4579 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 ANKRD50Q9ULJ7 1429 aa0.3□□□□□ -2.36
VPS8-220ENST00000469713 TRRAPQ9Y4A5 3859 aa0.29□□□□□ -2.36
VPS8-220ENST00000469713 EFCAB5A4FU69 1503 aa0.29□□□□□ -2.36
VPS8-220ENST00000469713 CLASP1Q7Z460 1538 aa0.29□□□□□ -2.36
VPS8-220ENST00000469713 INO80Q9ULG1 1556 aaPredicted RBP0.29□□□□□ -2.36
VPS8-220ENST00000469713 KRTAP19-6Q3LI70 58 aa0.29□□□□□ -2.36
VPS8-220ENST00000469713 NHSQ6T4R5 1651 aa0.29□□□□□ -2.36
VPS8-220ENST00000469713 HSPG2P98160 4391 aa0.29□□□□□ -2.36
VPS8-220ENST00000469713 ANK2Q01484 3957 aa0.29□□□□□ -2.36
VPS8-220ENST00000469713 ALMS1Q8TCU4 4167 aa0.28□□□□□ -2.36
VPS8-220ENST00000469713 SPINK4O60575 86 aa0.28□□□□□ -2.36
VPS8-220ENST00000469713 C3orf79P0CE67 100 aa0.28□□□□□ -2.36
VPS8-220ENST00000469713 MT4P47944 62 aa0.28□□□□□ -2.36
VPS8-220ENST00000469713 U3KQA8 63 aa0.28□□□□□ -2.36
VPS8-220ENST00000469713 ERICH3Q5RHP9 1530 aa0.28□□□□□ -2.37
VPS8-220ENST00000469713 EFCAB6Q5THR3 1501 aa0.28□□□□□ -2.37
VPS8-220ENST00000469713 STARD9Q9P2P6 4700 aa0.28□□□□□ -2.37
VPS8-220ENST00000469713 CCDC180Q9P1Z9 1646 aa0.27□□□□□ -2.37
VPS8-220ENST00000469713 DNAH1Q9P2D7 4330 aa0.27□□□□□ -2.37
VPS8-220ENST00000469713 DNAH9Q9NYC9 4486 aa0.27□□□□□ -2.37
VPS8-220ENST00000469713 A0A087WWC5 75 aa0.26□□□□□ -2.37
VPS8-220ENST00000469713 LINC01549A6NIU2 74 aa0.26□□□□□ -2.37
VPS8-220ENST00000469713 CRIP1P50238 77 aa0.26□□□□□ -2.37
VPS8-220ENST00000469713 LINC00158P58513 81 aa0.26□□□□□ -2.37
VPS8-220ENST00000469713 COX6B2Q6YFQ2 88 aa0.26□□□□□ -2.37
VPS8-220ENST00000469713 PKHD1L1Q86WI1 4243 aa0.26□□□□□ -2.37
VPS8-220ENST00000469713 DYNC2H1Q8NCM8 4307 aaKnown RBP0.26□□□□□ -2.37
VPS8-220ENST00000469713 ABCA6Q8N139 1617 aa0.26□□□□□ -2.37
VPS8-220ENST00000469713 RNF17Q9BXT8 1623 aaKnown RBP0.26□□□□□ -2.37
VPS8-220ENST00000469713 GLI2P10070 1586 aa0.25□□□□□ -2.37
VPS8-220ENST00000469713 H0YAA0 97 aa0.25□□□□□ -2.37
VPS8-220ENST00000469713 PRM1P04553 51 aa0.25□□□□□ -2.37
VPS8-220ENST00000469713 SPRR2EP22531 72 aa0.25□□□□□ -2.37
VPS8-220ENST00000469713 SPRR2BP35325 72 aa0.25□□□□□ -2.37
VPS8-220ENST00000469713 SPRR2AP35326 72 aa0.25□□□□□ -2.37
VPS8-220ENST00000469713 KCNQ1DNQ9H478 68 aa0.25□□□□□ -2.37
VPS8-220ENST00000469713 DNAH6Q9C0G6 4158 aa0.25□□□□□ -2.37
VPS8-220ENST00000469713 THOC2Q8NI27 1593 aaKnown RBP0.24□□□□□ -2.37
VPS8-220ENST00000469713 ANK3Q12955 4377 aaKnown RBP0.24□□□□□ -2.37
VPS8-220ENST00000469713 HFM1A2PYH4 1435 aa0.24□□□□□ -2.37
VPS8-220ENST00000469713 EEA1Q15075 1411 aa0.24□□□□□ -2.37
VPS8-220ENST00000469713 DEFB131BA0A096LNP1 70 aa0.24□□□□□ -2.37
VPS8-220ENST00000469713 SPRR2DP22532 72 aa0.24□□□□□ -2.37
VPS8-220ENST00000469713 PLECQ15149 4684 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms