RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 SNCGO76070 127 aa8.63□□□□□ -1.03
TTC28-205ENST00000469670 DEFB116Q30KQ4 102 aa8.62□□□□□ -1.03
TTC28-205ENST00000469670 TAX1BP3O14907 124 aa8.61□□□□□ -1.03
TTC28-205ENST00000469670 ZCCHC13Q8WW36 166 aaKnown RBP8.59□□□□□ -1.03
TTC28-205ENST00000469670 FAM218AQ96MZ4 157 aa8.59□□□□□ -1.03
TTC28-205ENST00000469670 K7ERJ3 54 aa8.58□□□□□ -1.04
TTC28-205ENST00000469670 FABP2P12104 132 aa8.58□□□□□ -1.04
TTC28-205ENST00000469670 LINC00472Q9H8W2 130 aa8.58□□□□□ -1.04
TTC28-205ENST00000469670 RAB37Q96AX2 223 aa8.57□□□□□ -1.04
TTC28-205ENST00000469670 A0A0B4J2C4 111 aa8.56□□□□□ -1.04
TTC28-205ENST00000469670 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
TTC28-205ENST00000469670 A0A1B0GV90 55 aa8.56□□□□□ -1.04
TTC28-205ENST00000469670 C9orf118A6NHY6 69 aa8.56□□□□□ -1.04
TTC28-205ENST00000469670 H0YGX0 51 aa8.56□□□□□ -1.04
TTC28-205ENST00000469670 WFDC13Q8IUB5 93 aa8.55□□□□□ -1.04
TTC28-205ENST00000469670 C8orf87E5RJ46 101 aa8.54□□□□□ -1.04
TTC28-205ENST00000469670 GHRHP01286 108 aa8.54□□□□□ -1.04
TTC28-205ENST00000469670 PRO1854Q9UHT4 67 aa8.54□□□□□ -1.04
TTC28-205ENST00000469670 ANKRD29Q8N6D5 301 aa8.53□□□□□ -1.04
TTC28-205ENST00000469670 A0A1B0GVX0 72 aa8.5□□□□□ -1.05
TTC28-205ENST00000469670 NAA38Q9BRA0 125 aaKnown RBP8.49□□□□□ -1.05
TTC28-205ENST00000469670 A0A1B0GX51 115 aa8.48□□□□□ -1.05
TTC28-205ENST00000469670 A0A1W2PPM0 123 aa8.48□□□□□ -1.05
TTC28-205ENST00000469670 A0A1B0GV72 72 aa8.47□□□□□ -1.05
TTC28-205ENST00000469670 A6NN06 94 aa8.47□□□□□ -1.05
TTC28-205ENST00000469670 TRACP01848 142 aa8.45□□□□□ -1.06
TTC28-205ENST00000469670 CCKP06307 115 aa8.44□□□□□ -1.06
TTC28-205ENST00000469670 PSMB2P49721 201 aa8.43□□□□□ -1.06
TTC28-205ENST00000469670 LYRM7Q5U5X0 104 aa8.43□□□□□ -1.06
TTC28-205ENST00000469670 SPCS1Q9Y6A9 102 aa8.42□□□□□ -1.06
TTC28-205ENST00000469670 K7EP34 96 aa8.41□□□□□ -1.06
TTC28-205ENST00000469670 SCGB1C2P0DMR2 95 aa8.41□□□□□ -1.06
TTC28-205ENST00000469670 UBE2V1Q13404 147 aa8.41□□□□□ -1.06
TTC28-205ENST00000469670 GTF2H5Q6ZYL4 71 aa8.41□□□□□ -1.06
TTC28-205ENST00000469670 TRIAP1O43715 76 aa8.4□□□□□ -1.06
TTC28-205ENST00000469670 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
TTC28-205ENST00000469670 COX6CP09669 75 aa8.39□□□□□ -1.07
TTC28-205ENST00000469670 KRTAP5-9P26371 169 aa8.38□□□□□ -1.07
TTC28-205ENST00000469670 MDN1Q9NU22 5596 aa8.38□□□□□ -1.07
TTC28-205ENST00000469670 ORMDL1Q9P0S3 153 aa8.36□□□□□ -1.07
TTC28-205ENST00000469670 KMT2DO14686 5537 aa8.35□□□□□ -1.07
TTC28-205ENST00000469670 H3BQ85 93 aa8.33□□□□□ -1.08
TTC28-205ENST00000469670 DNAL4O96015 105 aa8.33□□□□□ -1.08
TTC28-205ENST00000469670 MT1BP07438 61 aa8.33□□□□□ -1.08
TTC28-205ENST00000469670 ATXN8Q156A1 80 aa8.33□□□□□ -1.08
TTC28-205ENST00000469670 J3KT08 172 aa8.32□□□□□ -1.08
TTC28-205ENST00000469670 VPS25Q9BRG1 176 aa8.32□□□□□ -1.08
TTC28-205ENST00000469670 TMEM256-PLSCR3K7ERE1 68 aa8.31□□□□□ -1.08
TTC28-205ENST00000469670 DSCR8Q96T75 97 aa8.29□□□□□ -1.08
TTC28-205ENST00000469670 IGKV3D-7A0A0C4DH55 119 aa8.28□□□□□ -1.08
TTC28-205ENST00000469670 F8W1H4 67 aa8.28□□□□□ -1.08
TTC28-205ENST00000469670 NDUFB1O75438 58 aa8.28□□□□□ -1.08
TTC28-205ENST00000469670 KRTAP2-3P0C7H8 128 aa8.28□□□□□ -1.08
TTC28-205ENST00000469670 Q5VV11 94 aa8.28□□□□□ -1.08
TTC28-205ENST00000469670 KRTAP2-4Q9BYR9 128 aa8.28□□□□□ -1.08
TTC28-205ENST00000469670 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
TTC28-205ENST00000469670 KRTAP10-5P60370 271 aa8.26□□□□□ -1.09
TTC28-205ENST00000469670 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
TTC28-205ENST00000469670 C9JAW5 83 aa8.24□□□□□ -1.09
TTC28-205ENST00000469670 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.1
TTC28-205ENST00000469670 KRTAP19-8Q3LI54 63 aa8.21□□□□□ -1.1
TTC28-205ENST00000469670 FAM236AA0A1B0GUQ0 79 aa8.2□□□□□ -1.1
TTC28-205ENST00000469670 FAM236BA0A1B0GV22 79 aa8.2□□□□□ -1.1
TTC28-205ENST00000469670 RBM3P98179 157 aaKnown RBP8.2□□□□□ -1.1
TTC28-205ENST00000469670 Q6ZVQ6 151 aa8.2□□□□□ -1.1
TTC28-205ENST00000469670 H3BT86 120 aa8.19□□□□□ -1.1
TTC28-205ENST00000469670 C21orf62-AS1Q17RA5 79 aa8.19□□□□□ -1.1
TTC28-205ENST00000469670 Q6ZQT0 140 aa8.18□□□□□ -1.1
TTC28-205ENST00000469670 BAALC-AS2P0C853 105 aa8.17□□□□□ -1.1
TTC28-205ENST00000469670 SPRR2GQ9BYE4 73 aa8.16□□□□□ -1.1
TTC28-205ENST00000469670 ETDBQ3ZM63 59 aa8.14□□□□□ -1.11
TTC28-205ENST00000469670 C5orf47Q569G3 176 aa8.11□□□□□ -1.11
TTC28-205ENST00000469670 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
TTC28-205ENST00000469670 IGKV2-30P06310 120 aa8.1□□□□□ -1.11
TTC28-205ENST00000469670 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.11
TTC28-205ENST00000469670 TMEM254Q8TBM7 123 aa8.08□□□□□ -1.12
TTC28-205ENST00000469670 PRR15Q8IV56 129 aa8.07□□□□□ -1.12
TTC28-205ENST00000469670 C7orf65Q6ZTY9 151 aa8.06□□□□□ -1.12
TTC28-205ENST00000469670 MMP24-AS1A0A0U1RRL7 71 aa8.05□□□□□ -1.12
TTC28-205ENST00000469670 K7ERU9 68 aa8.05□□□□□ -1.12
TTC28-205ENST00000469670 J3QR89 54 aa8.04□□□□□ -1.12
TTC28-205ENST00000469670 NDUFS5O43920 106 aa8.04□□□□□ -1.12
TTC28-205ENST00000469670 SPRR2EP22531 72 aa8.03□□□□□ -1.12
TTC28-205ENST00000469670 SPRR2BP35325 72 aa8.03□□□□□ -1.12
TTC28-205ENST00000469670 SPRR2AP35326 72 aa8.03□□□□□ -1.12
TTC28-205ENST00000469670 JMJD7-PLA2G4BH0Y9G9 81 aa8.02□□□□□ -1.13
TTC28-205ENST00000469670 C4orf26Q17RF5 130 aa8.02□□□□□ -1.13
TTC28-205ENST00000469670 IMUPQ9GZP8 106 aa8.01□□□□□ -1.13
TTC28-205ENST00000469670 SPRR2FQ96RM1 72 aa8□□□□□ -1.13
TTC28-205ENST00000469670 A0A1B0GW54 56 aa7.99□□□□□ -1.13
TTC28-205ENST00000469670 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
TTC28-205ENST00000469670 Q5W150 140 aa7.99□□□□□ -1.13
TTC28-205ENST00000469670 KRTAP2-2Q9BYT5 123 aa7.99□□□□□ -1.13
TTC28-205ENST00000469670 KRTAP2-1Q9BYU5 128 aa7.99□□□□□ -1.13
TTC28-205ENST00000469670 CSAG1Q6PB30 78 aa7.96□□□□□ -1.14
TTC28-205ENST00000469670 KLKP1Q107X0 134 aa7.95□□□□□ -1.14
TTC28-205ENST00000469670 C14orf132Q9NPU4 83 aa7.95□□□□□ -1.14
TTC28-205ENST00000469670 S4R3F8 94 aa7.94□□□□□ -1.14
TTC28-205ENST00000469670 LOC110117498A0A087WWA1 95 aa7.92□□□□□ -1.14
TTC28-205ENST00000469670 PDE6GP18545 87 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms