RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 PDE6GP18545 87 aa5.03□□□□□ -1.6
FN1-216ENST00000469569 A0A1B0GW54 56 aa5.02□□□□□ -1.61
FN1-216ENST00000469569 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
FN1-216ENST00000469569 A0A087WSZ3 146 aa5.01□□□□□ -1.61
FN1-216ENST00000469569 C9JAW5 83 aa5.01□□□□□ -1.61
FN1-216ENST00000469569 CCKP06307 115 aa5.01□□□□□ -1.61
FN1-216ENST00000469569 A0A1W2PNM2 257 aa5□□□□□ -1.61
FN1-216ENST00000469569 IGKV2-30P06310 120 aa5□□□□□ -1.61
FN1-216ENST00000469569 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
FN1-216ENST00000469569 C9orf92A6NGG3 77 aa4.99□□□□□ -1.61
FN1-216ENST00000469569 RNF213Q63HN8 5207 aa4.99□□□□□ -1.61
FN1-216ENST00000469569 A0A1W2PPM0 123 aa4.98□□□□□ -1.61
FN1-216ENST00000469569 NAA38Q9BRA0 125 aaKnown RBP4.98□□□□□ -1.61
FN1-216ENST00000469569 TAX1BP3O14907 124 aa4.97□□□□□ -1.61
FN1-216ENST00000469569 COL5A1-AS1Q5SY13 56 aa4.97□□□□□ -1.61
FN1-216ENST00000469569 MUC17Q685J3 4493 aa4.96□□□□□ -1.61
FN1-216ENST00000469569 LOC110117498A0A087WWA1 95 aa4.96□□□□□ -1.62
FN1-216ENST00000469569 A0A1B0GV72 72 aa4.96□□□□□ -1.62
FN1-216ENST00000469569 H3BT86 120 aa4.96□□□□□ -1.62
FN1-216ENST00000469569 J3KT08 172 aa4.95□□□□□ -1.62
FN1-216ENST00000469569 VPS25Q9BRG1 176 aa4.95□□□□□ -1.62
FN1-216ENST00000469569 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
FN1-216ENST00000469569 SIGMAR1Q99720 223 aa4.94□□□□□ -1.62
FN1-216ENST00000469569 IGKV4-1P06312 121 aa4.93□□□□□ -1.62
FN1-216ENST00000469569 Q75L30 129 aa4.93□□□□□ -1.62
FN1-216ENST00000469569 Q8N9P0 234 aaPredicted RBP4.93□□□□□ -1.62
FN1-216ENST00000469569 OBSCN-AS1Q96MR7 158 aa4.93□□□□□ -1.62
FN1-216ENST00000469569 Q96NJ1 140 aa4.93□□□□□ -1.62
FN1-216ENST00000469569 MUC2Q02817 5179 aa4.92□□□□□ -1.62
FN1-216ENST00000469569 ATP11AUNQ6ZP68 121 aa4.92□□□□□ -1.62
FN1-216ENST00000469569 Q6ZQT0 140 aa4.92□□□□□ -1.62
FN1-216ENST00000469569 LINC00472Q9H8W2 130 aa4.92□□□□□ -1.62
FN1-216ENST00000469569 SPCS1Q9Y6A9 102 aa4.92□□□□□ -1.62
FN1-216ENST00000469569 LINC00313P59037 77 aa4.91□□□□□ -1.62
FN1-216ENST00000469569 PCOTHQ58A44 107 aa4.91□□□□□ -1.62
FN1-216ENST00000469569 C8orf87E5RJ46 101 aa4.9□□□□□ -1.63
FN1-216ENST00000469569 NDUFB1O75438 58 aa4.9□□□□□ -1.63
FN1-216ENST00000469569 C14orf132Q9NPU4 83 aa4.89□□□□□ -1.63
FN1-216ENST00000469569 GTF2H5Q6ZYL4 71 aa4.88□□□□□ -1.63
FN1-216ENST00000469569 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
FN1-216ENST00000469569 A8MUU9 505 aa4.87□□□□□ -1.63
FN1-216ENST00000469569 NREPQ16612 68 aa4.87□□□□□ -1.63
FN1-216ENST00000469569 A0A1B0GVX0 72 aa4.86□□□□□ -1.63
FN1-216ENST00000469569 IGHV6-1A0A0B4J1U7 121 aa4.85□□□□□ -1.63
FN1-216ENST00000469569 PCP4L1A6NKN8 68 aa4.85□□□□□ -1.63
FN1-216ENST00000469569 K7EP34 96 aa4.85□□□□□ -1.63
FN1-216ENST00000469569 DSCR10P59022 87 aa4.85□□□□□ -1.63
FN1-216ENST00000469569 DEFB116Q30KQ4 102 aa4.85□□□□□ -1.63
FN1-216ENST00000469569 A8MWP4 228 aa4.83□□□□□ -1.64
FN1-216ENST00000469569 F8W1H4 67 aa4.82□□□□□ -1.64
FN1-216ENST00000469569 MTURNQ8N3F0 131 aa4.82□□□□□ -1.64
FN1-216ENST00000469569 KRTAP4-1Q9BYQ7 146 aa4.82□□□□□ -1.64
FN1-216ENST00000469569 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
FN1-216ENST00000469569 KRTAP16-1A8MUX0 517 aa4.8□□□□□ -1.64
FN1-216ENST00000469569 BPY2O14599 106 aa4.79□□□□□ -1.64
FN1-216ENST00000469569 PRR15Q8IV56 129 aa4.79□□□□□ -1.64
FN1-216ENST00000469569 PRO0461Q9UI25 63 aa4.79□□□□□ -1.64
FN1-216ENST00000469569 UBL5Q9BZL1 73 aa4.78□□□□□ -1.64
FN1-216ENST00000469569 C8orf17Q9NRJ1 99 aa4.78□□□□□ -1.64
FN1-216ENST00000469569 IGKV3D-7A0A0C4DH55 119 aa4.77□□□□□ -1.65
FN1-216ENST00000469569 COX6B2Q6YFQ2 88 aa4.77□□□□□ -1.65
FN1-216ENST00000469569 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
FN1-216ENST00000469569 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
FN1-216ENST00000469569 Q6ZVQ6 151 aa4.76□□□□□ -1.65
FN1-216ENST00000469569 TMEM254Q8TBM7 123 aa4.74□□□□□ -1.65
FN1-216ENST00000469569 hDV103S1A0JD37 113 aa4.73□□□□□ -1.65
FN1-216ENST00000469569 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
FN1-216ENST00000469569 ZCCHC13Q8WW36 166 aaKnown RBP4.73□□□□□ -1.65
FN1-216ENST00000469569 ETDBQ3ZM63 59 aa4.72□□□□□ -1.65
FN1-216ENST00000469569 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
FN1-216ENST00000469569 K7EQZ3 153 aa4.71□□□□□ -1.66
FN1-216ENST00000469569 ACYP1P07311 99 aa4.71□□□□□ -1.66
FN1-216ENST00000469569 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
FN1-216ENST00000469569 LINC00846Q9NV44 126 aa4.71□□□□□ -1.66
FN1-216ENST00000469569 RBM12B-AS1Q9P1G2 102 aa4.71□□□□□ -1.66
FN1-216ENST00000469569 MMP24-AS1A0A0U1RRL7 71 aa4.7□□□□□ -1.66
FN1-216ENST00000469569 CXCL6P80162 114 aa4.69□□□□□ -1.66
FN1-216ENST00000469569 NDUFS5O43920 106 aa4.68□□□□□ -1.66
FN1-216ENST00000469569 CASC2Q6XLA1 102 aa4.68□□□□□ -1.66
FN1-216ENST00000469569 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
FN1-216ENST00000469569 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
FN1-216ENST00000469569 FAM236DA0A1B0GTK5 79 aa4.66□□□□□ -1.66
FN1-216ENST00000469569 M0R2T5 61 aa4.66□□□□□ -1.66
FN1-216ENST00000469569 FAM236CP0DP71 79 aa4.66□□□□□ -1.66
FN1-216ENST00000469569 SPINK7P58062 85 aa4.66□□□□□ -1.66
FN1-216ENST00000469569 MT1HP80294 61 aa4.66□□□□□ -1.66
FN1-216ENST00000469569 WFDC13Q8IUB5 93 aa4.65□□□□□ -1.67
FN1-216ENST00000469569 HCG22E2RYF7 251 aa4.64□□□□□ -1.67
FN1-216ENST00000469569 HRES1P13985 223 aa4.63□□□□□ -1.67
FN1-216ENST00000469569 ATP5EP2Q5VTU8 51 aa4.63□□□□□ -1.67
FN1-216ENST00000469569 Q8N9L7 120 aa4.63□□□□□ -1.67
FN1-216ENST00000469569 TP53AIP1Q9HCN2 124 aa4.62□□□□□ -1.67
FN1-216ENST00000469569 J3QR89 54 aa4.6□□□□□ -1.67
FN1-216ENST00000469569 C7orf65Q6ZTY9 151 aa4.59□□□□□ -1.67
FN1-216ENST00000469569 A0A1B0GV90 55 aa4.58□□□□□ -1.68
FN1-216ENST00000469569 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
FN1-216ENST00000469569 LINC00643Q86TS7 51 aa4.57□□□□□ -1.68
FN1-216ENST00000469569 Q5W150 140 aa4.54□□□□□ -1.68
FN1-216ENST00000469569 HIST1H4AP62805 103 aaKnown RBP4.53□□□□□ -1.68
FN1-216ENST00000469569 H1FX-AS1Q4G0G2 97 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms