RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ACYP1P07311 99 aa4.69□□□□□ -1.66
NPHP3-204ENST00000469232 LINC00304Q8N9R0 145 aa4.69□□□□□ -1.66
NPHP3-204ENST00000469232 J3QR89 54 aa4.67□□□□□ -1.66
NPHP3-204ENST00000469232 K7ERU9 68 aa4.66□□□□□ -1.66
NPHP3-204ENST00000469232 LINC00846Q9NV44 126 aa4.66□□□□□ -1.66
NPHP3-204ENST00000469232 A0A087WSZ3 146 aa4.65□□□□□ -1.66
NPHP3-204ENST00000469232 Q96NJ1 140 aa4.65□□□□□ -1.66
NPHP3-204ENST00000469232 LINC00472Q9H8W2 130 aa4.65□□□□□ -1.66
NPHP3-204ENST00000469232 SS18L2Q9UHA2 77 aa4.65□□□□□ -1.66
NPHP3-204ENST00000469232 VPS25Q9BRG1 176 aa4.64□□□□□ -1.67
NPHP3-204ENST00000469232 LIMD2Q9BT23 127 aa4.64□□□□□ -1.67
NPHP3-204ENST00000469232 DMBT1Q9UGM3 2413 aaPredicted RBP4.64□□□□□ -1.67
NPHP3-204ENST00000469232 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
NPHP3-204ENST00000469232 Q6ZVQ6 151 aa4.63□□□□□ -1.67
NPHP3-204ENST00000469232 C1orf195Q5TG92 126 aa4.62□□□□□ -1.67
NPHP3-204ENST00000469232 HRCT1Q6UXD1 115 aa4.62□□□□□ -1.67
NPHP3-204ENST00000469232 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
NPHP3-204ENST00000469232 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
NPHP3-204ENST00000469232 NREPQ16612 68 aa4.61□□□□□ -1.67
NPHP3-204ENST00000469232 UBL5Q9BZL1 73 aa4.61□□□□□ -1.67
NPHP3-204ENST00000469232 LINC00643Q86TS7 51 aa4.6□□□□□ -1.67
NPHP3-204ENST00000469232 J3KT08 172 aa4.59□□□□□ -1.67
NPHP3-204ENST00000469232 CXCL6P80162 114 aa4.58□□□□□ -1.68
NPHP3-204ENST00000469232 ATP5EP2Q5VTU8 51 aa4.58□□□□□ -1.68
NPHP3-204ENST00000469232 DSCR10P59022 87 aa4.57□□□□□ -1.68
NPHP3-204ENST00000469232 FP248Q71RG6 208 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-204ENST00000469232 SIGMAR1Q99720 223 aa4.56□□□□□ -1.68
NPHP3-204ENST00000469232 A8MWP4 228 aa4.55□□□□□ -1.68
NPHP3-204ENST00000469232 BPY2O14599 106 aa4.55□□□□□ -1.68
NPHP3-204ENST00000469232 IGKV4-1P06312 121 aa4.54□□□□□ -1.68
NPHP3-204ENST00000469232 IGKV3D-7A0A0C4DH55 119 aa4.54□□□□□ -1.68
NPHP3-204ENST00000469232 PRR15Q8IV56 129 aa4.54□□□□□ -1.68
NPHP3-204ENST00000469232 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
NPHP3-204ENST00000469232 DEFB116Q30KQ4 102 aa4.53□□□□□ -1.68
NPHP3-204ENST00000469232 IMUPQ9GZP8 106 aa4.53□□□□□ -1.68
NPHP3-204ENST00000469232 A0A1B0GVX0 72 aa4.52□□□□□ -1.69
NPHP3-204ENST00000469232 HERC1Q15751 4861 aa4.51□□□□□ -1.69
NPHP3-204ENST00000469232 RETNLBQ9BQ08 111 aa4.51□□□□□ -1.69
NPHP3-204ENST00000469232 C8orf87E5RJ46 101 aa4.5□□□□□ -1.69
NPHP3-204ENST00000469232 K7EQZ3 153 aa4.5□□□□□ -1.69
NPHP3-204ENST00000469232 NDUFB1O75438 58 aa4.5□□□□□ -1.69
NPHP3-204ENST00000469232 MT-ATP8P03928 68 aa4.5□□□□□ -1.69
NPHP3-204ENST00000469232 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
NPHP3-204ENST00000469232 IGLV7-46A0A075B6I9 117 aa4.49□□□□□ -1.69
NPHP3-204ENST00000469232 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
NPHP3-204ENST00000469232 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
NPHP3-204ENST00000469232 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
NPHP3-204ENST00000469232 NOTCH2NLQ7Z3S9 236 aa4.48□□□□□ -1.69
NPHP3-204ENST00000469232 Q8N9L7 120 aa4.48□□□□□ -1.69
NPHP3-204ENST00000469232 C8orf17Q9NRJ1 99 aa4.48□□□□□ -1.69
NPHP3-204ENST00000469232 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
NPHP3-204ENST00000469232 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
NPHP3-204ENST00000469232 LINC00313P59037 77 aa4.46□□□□□ -1.7
NPHP3-204ENST00000469232 HIST1H4AP62805 103 aaKnown RBP4.46□□□□□ -1.7
NPHP3-204ENST00000469232 Q8N9P0 234 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-204ENST00000469232 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
NPHP3-204ENST00000469232 HCG22E2RYF7 251 aa4.44□□□□□ -1.7
NPHP3-204ENST00000469232 PRR4Q16378 134 aa4.44□□□□□ -1.7
NPHP3-204ENST00000469232 C20orf166-AS1Q96NR2 134 aa4.44□□□□□ -1.7
NPHP3-204ENST00000469232 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
NPHP3-204ENST00000469232 A8MUU9 505 aa4.43□□□□□ -1.7
NPHP3-204ENST00000469232 A0A087WVE0 104 aa4.43□□□□□ -1.7
NPHP3-204ENST00000469232 CASC2Q6XLA1 102 aa4.42□□□□□ -1.7
NPHP3-204ENST00000469232 Q75L30 129 aa4.42□□□□□ -1.7
NPHP3-204ENST00000469232 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
NPHP3-204ENST00000469232 LPAP08519 4548 aa4.41□□□□□ -1.7
NPHP3-204ENST00000469232 LRP2P98164 4655 aa4.41□□□□□ -1.7
NPHP3-204ENST00000469232 C9orf92A6NGG3 77 aa4.39□□□□□ -1.71
NPHP3-204ENST00000469232 WFDC13Q8IUB5 93 aa4.39□□□□□ -1.71
NPHP3-204ENST00000469232 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
NPHP3-204ENST00000469232 RPL37P61927 97 aaKnown RBP4.38□□□□□ -1.71
NPHP3-204ENST00000469232 OCR1Q9BZK8 76 aa4.38□□□□□ -1.71
NPHP3-204ENST00000469232 SCGB1A1P11684 91 aa4.37□□□□□ -1.71
NPHP3-204ENST00000469232 FAM236AA0A1B0GUQ0 79 aa4.36□□□□□ -1.71
NPHP3-204ENST00000469232 FAM236BA0A1B0GV22 79 aa4.36□□□□□ -1.71
NPHP3-204ENST00000469232 TP53AIP1Q9HCN2 124 aa4.36□□□□□ -1.71
NPHP3-204ENST00000469232 SMIM20Q8N5G0 67 aa4.34□□□□□ -1.71
NPHP3-204ENST00000469232 ATOX1O00244 68 aa4.33□□□□□ -1.72
NPHP3-204ENST00000469232 UQCRQO14949 82 aa4.33□□□□□ -1.72
NPHP3-204ENST00000469232 Q5W150 140 aa4.33□□□□□ -1.72
NPHP3-204ENST00000469232 ZCCHC13Q8WW36 166 aaKnown RBP4.33□□□□□ -1.72
NPHP3-204ENST00000469232 TRAV7A0A075B6U4 112 aa4.32□□□□□ -1.72
NPHP3-204ENST00000469232 NDUFS5O43920 106 aa4.29□□□□□ -1.72
NPHP3-204ENST00000469232 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
NPHP3-204ENST00000469232 C5orf47Q569G3 176 aa4.28□□□□□ -1.72
NPHP3-204ENST00000469232 ATP11AUNQ6ZP68 121 aa4.28□□□□□ -1.72
NPHP3-204ENST00000469232 SERP2Q8N6R1 65 aa4.28□□□□□ -1.72
NPHP3-204ENST00000469232 TRAV22A0A0B4J277 110 aa4.28□□□□□ -1.72
NPHP3-204ENST00000469232 H3BPC8 53 aa4.27□□□□□ -1.73
NPHP3-204ENST00000469232 PCOTHQ58A44 107 aa4.27□□□□□ -1.73
NPHP3-204ENST00000469232 H0Y9P7 68 aa4.25□□□□□ -1.73
NPHP3-204ENST00000469232 IGKV2-30P06310 120 aa4.25□□□□□ -1.73
NPHP3-204ENST00000469232 COX7CP15954 63 aa4.24□□□□□ -1.73
NPHP3-204ENST00000469232 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
NPHP3-204ENST00000469232 A0A0U1RQV1 116 aa4.23□□□□□ -1.73
NPHP3-204ENST00000469232 LOC101927531A0A1B0GV80 90 aa4.23□□□□□ -1.73
NPHP3-204ENST00000469232 CYP4F30PQ9H0H9 118 aa4.23□□□□□ -1.73
NPHP3-204ENST00000469232 MP68P56378 58 aa4.22□□□□□ -1.73
NPHP3-204ENST00000469232 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
NPHP3-204ENST00000469232 ANAPC13Q9BS18 74 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms