RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 CDK2AP2O75956 126 aa8.51□□□□□ -1.05
SMARCD3-205ENST00000469154 PLAC8Q9NZF1 115 aa8.5□□□□□ -1.05
SMARCD3-205ENST00000469154 PMAIP1Q13794 54 aa8.49□□□□□ -1.05
SMARCD3-205ENST00000469154 HECTD4Q9Y4D8 3996 aa8.48□□□□□ -1.05
SMARCD3-205ENST00000469154 IGHV6-1A0A0B4J1U7 121 aa8.48□□□□□ -1.05
SMARCD3-205ENST00000469154 A8MUN3 132 aa8.48□□□□□ -1.05
SMARCD3-205ENST00000469154 ZNF861PO60384 105 aa8.48□□□□□ -1.05
SMARCD3-205ENST00000469154 LIMD2Q9BT23 127 aa8.48□□□□□ -1.05
SMARCD3-205ENST00000469154 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
SMARCD3-205ENST00000469154 FAT2Q9NYQ8 4349 aa8.47□□□□□ -1.05
SMARCD3-205ENST00000469154 COA5Q86WW8 74 aa8.46□□□□□ -1.05
SMARCD3-205ENST00000469154 RYR2Q92736 4967 aa8.46□□□□□ -1.05
SMARCD3-205ENST00000469154 KRTAP10-2P60368 255 aa8.46□□□□□ -1.06
SMARCD3-205ENST00000469154 MRPL34Q9BQ48 92 aaKnown RBP8.46□□□□□ -1.06
SMARCD3-205ENST00000469154 NDUFS5O43920 106 aa8.45□□□□□ -1.06
SMARCD3-205ENST00000469154 PCOTHQ58A44 107 aa8.45□□□□□ -1.06
SMARCD3-205ENST00000469154 Q5VV11 94 aa8.44□□□□□ -1.06
SMARCD3-205ENST00000469154 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
SMARCD3-205ENST00000469154 DNAH11Q96DT5 4516 aa8.41□□□□□ -1.06
SMARCD3-205ENST00000469154 PRR15LQ9BU68 103 aa8.4□□□□□ -1.06
SMARCD3-205ENST00000469154 PKD1P98161 4303 aa8.39□□□□□ -1.07
SMARCD3-205ENST00000469154 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
SMARCD3-205ENST00000469154 DNAH8Q96JB1 4490 aa8.37□□□□□ -1.07
SMARCD3-205ENST00000469154 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
SMARCD3-205ENST00000469154 A0A087X002 238 aa8.37□□□□□ -1.07
SMARCD3-205ENST00000469154 NOTCH2NLQ7Z3S9 236 aa8.37□□□□□ -1.07
SMARCD3-205ENST00000469154 LOC101927531A0A1B0GV80 90 aa8.35□□□□□ -1.07
SMARCD3-205ENST00000469154 Q75L30 129 aa8.35□□□□□ -1.07
SMARCD3-205ENST00000469154 RYR3Q15413 4870 aa8.35□□□□□ -1.07
SMARCD3-205ENST00000469154 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
SMARCD3-205ENST00000469154 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
SMARCD3-205ENST00000469154 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
SMARCD3-205ENST00000469154 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
SMARCD3-205ENST00000469154 SPINK6Q6UWN8 80 aa8.33□□□□□ -1.08
SMARCD3-205ENST00000469154 CIRBP-AS1Q8TBR5 109 aa8.32□□□□□ -1.08
SMARCD3-205ENST00000469154 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
SMARCD3-205ENST00000469154 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
SMARCD3-205ENST00000469154 LINC01558Q9Y6Z2 57 aa8.31□□□□□ -1.08
SMARCD3-205ENST00000469154 H3BS24 57 aa8.3□□□□□ -1.08
SMARCD3-205ENST00000469154 HRES1P13985 223 aa8.3□□□□□ -1.08
SMARCD3-205ENST00000469154 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
SMARCD3-205ENST00000469154 Q5W150 140 aa8.27□□□□□ -1.09
SMARCD3-205ENST00000469154 Q6ZSA8 131 aa8.27□□□□□ -1.09
SMARCD3-205ENST00000469154 A6NED7 52 aa8.27□□□□□ -1.09
SMARCD3-205ENST00000469154 SPAG11AQ6PDA7 123 aa8.27□□□□□ -1.09
SMARCD3-205ENST00000469154 A8MU10 97 aa8.26□□□□□ -1.09
SMARCD3-205ENST00000469154 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
SMARCD3-205ENST00000469154 LCA10Q71F78 164 aa8.21□□□□□ -1.09
SMARCD3-205ENST00000469154 CDC42SE1Q9NRR8 79 aa8.21□□□□□ -1.1
SMARCD3-205ENST00000469154 LINC00313P59037 77 aa8.2□□□□□ -1.1
SMARCD3-205ENST00000469154 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
SMARCD3-205ENST00000469154 DYNC1H1Q14204 4646 aaKnown RBP8.2□□□□□ -1.1
SMARCD3-205ENST00000469154 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
SMARCD3-205ENST00000469154 ACYP2P14621 99 aa8.19□□□□□ -1.1
SMARCD3-205ENST00000469154 RBM12B-AS1Q9P1G2 102 aa8.19□□□□□ -1.1
SMARCD3-205ENST00000469154 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
SMARCD3-205ENST00000469154 SPTSSBQ8NFR3 76 aa8.16□□□□□ -1.1
SMARCD3-205ENST00000469154 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
SMARCD3-205ENST00000469154 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
SMARCD3-205ENST00000469154 IGKV2-30P06310 120 aa8.12□□□□□ -1.11
SMARCD3-205ENST00000469154 SMR3BP02814 79 aaPredicted RBP8.11□□□□□ -1.11
SMARCD3-205ENST00000469154 SPINK7P58062 85 aa8.11□□□□□ -1.11
SMARCD3-205ENST00000469154 APOBP04114 4563 aaKnown RBP8.1□□□□□ -1.11
SMARCD3-205ENST00000469154 KRTAP16-1A8MUX0 517 aa8.09□□□□□ -1.11
SMARCD3-205ENST00000469154 RETNLBQ9BQ08 111 aa8.09□□□□□ -1.11
SMARCD3-205ENST00000469154 A6NN06 94 aa8.08□□□□□ -1.12
SMARCD3-205ENST00000469154 KTN1-AS1Q86SY8 53 aa8.08□□□□□ -1.12
SMARCD3-205ENST00000469154 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
SMARCD3-205ENST00000469154 EPPK1P58107 5090 aaKnown RBP8.07□□□□□ -1.12
SMARCD3-205ENST00000469154 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
SMARCD3-205ENST00000469154 FAT1Q14517 4588 aa8.01□□□□□ -1.13
SMARCD3-205ENST00000469154 HSPG2P98160 4391 aa7.98□□□□□ -1.13
SMARCD3-205ENST00000469154 A0A1B0GU69 56 aa7.98□□□□□ -1.13
SMARCD3-205ENST00000469154 IGKV2D-30A0A075B6S6 120 aa7.98□□□□□ -1.13
SMARCD3-205ENST00000469154 TYMSOSQ8TAI1 123 aa7.98□□□□□ -1.13
SMARCD3-205ENST00000469154 SPINK1P00995 79 aa7.97□□□□□ -1.13
SMARCD3-205ENST00000469154 PLA2G1BP04054 148 aaKnown RBP7.96□□□□□ -1.14
SMARCD3-205ENST00000469154 KIAA1109Q2LD37 5005 aa7.96□□□□□ -1.14
SMARCD3-205ENST00000469154 C7orf65Q6ZTY9 151 aa7.95□□□□□ -1.14
SMARCD3-205ENST00000469154 KRTAP10-4P60372 401 aaPredicted RBP7.94□□□□□ -1.14
SMARCD3-205ENST00000469154 RYR1P21817 5038 aa7.93□□□□□ -1.14
SMARCD3-205ENST00000469154 Q5VSD8 79 aa7.91□□□□□ -1.14
SMARCD3-205ENST00000469154 KRTAP17-1Q9BYP8 105 aa7.91□□□□□ -1.14
SMARCD3-205ENST00000469154 RPS29P62273 56 aaKnown RBP7.9□□□□□ -1.15
SMARCD3-205ENST00000469154 SPATA8Q6RVD6 105 aa7.88□□□□□ -1.15
SMARCD3-205ENST00000469154 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
SMARCD3-205ENST00000469154 Q8N1X5 172 aa7.86□□□□□ -1.15
SMARCD3-205ENST00000469154 UQCR11O14957 56 aa7.85□□□□□ -1.15
SMARCD3-205ENST00000469154 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
SMARCD3-205ENST00000469154 FLG2Q5D862 2391 aaPredicted RBP7.78□□□□□ -1.16
SMARCD3-205ENST00000469154 BIRC6Q9NR09 4857 aa7.77□□□□□ -1.16
SMARCD3-205ENST00000469154 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
SMARCD3-205ENST00000469154 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
SMARCD3-205ENST00000469154 A8MUU9 505 aa7.73□□□□□ -1.17
SMARCD3-205ENST00000469154 C20orf166-AS1Q96NR2 134 aa7.72□□□□□ -1.17
SMARCD3-205ENST00000469154 LRP1Q07954 4544 aaKnown RBP7.71□□□□□ -1.18
SMARCD3-205ENST00000469154 C9orf92A6NGG3 77 aa7.69□□□□□ -1.18
SMARCD3-205ENST00000469154 MYCBP2O75592 4640 aa7.68□□□□□ -1.18
SMARCD3-205ENST00000469154 A0A0A0MQY5 61 aa7.66□□□□□ -1.18
SMARCD3-205ENST00000469154 J3QL48 77 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms