RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SPINK1P00995 79 aa5.43□□□□□ -1.54
SMC1A-205ENST00000469129 SPAG11AQ6PDA7 123 aa5.43□□□□□ -1.54
SMC1A-205ENST00000469129 hDV103S1A0JD37 113 aa5.42□□□□□ -1.54
SMC1A-205ENST00000469129 KRTAP29-1A8MX34 341 aaPredicted RBP5.42□□□□□ -1.54
SMC1A-205ENST00000469129 C20orf197Q8N268 126 aa5.42□□□□□ -1.54
SMC1A-205ENST00000469129 LINC00304Q8N9R0 145 aa5.42□□□□□ -1.54
SMC1A-205ENST00000469129 KRTAP17-1Q9BYP8 105 aa5.42□□□□□ -1.54
SMC1A-205ENST00000469129 C8orf17Q9NRJ1 99 aa5.42□□□□□ -1.54
SMC1A-205ENST00000469129 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
SMC1A-205ENST00000469129 C8orf87E5RJ46 101 aa5.41□□□□□ -1.54
SMC1A-205ENST00000469129 KLKP1Q107X0 134 aa5.41□□□□□ -1.54
SMC1A-205ENST00000469129 Q8N1X5 172 aa5.41□□□□□ -1.54
SMC1A-205ENST00000469129 KRTAP4-5Q9BYR2 181 aa5.41□□□□□ -1.54
SMC1A-205ENST00000469129 NDUFC1O43677 76 aa5.4□□□□□ -1.54
SMC1A-205ENST00000469129 PRR26Q8N8Z3 221 aa5.4□□□□□ -1.54
SMC1A-205ENST00000469129 TMEM254Q8TBM7 123 aa5.4□□□□□ -1.54
SMC1A-205ENST00000469129 FAT1Q14517 4588 aa5.4□□□□□ -1.55
SMC1A-205ENST00000469129 TMEM258P61165 79 aa5.39□□□□□ -1.55
SMC1A-205ENST00000469129 C5orf47Q569G3 176 aa5.39□□□□□ -1.55
SMC1A-205ENST00000469129 VPS13BQ7Z7G8 4022 aa5.39□□□□□ -1.55
SMC1A-205ENST00000469129 Q5VSD8 79 aa5.38□□□□□ -1.55
SMC1A-205ENST00000469129 TP53AIP1Q9HCN2 124 aa5.38□□□□□ -1.55
SMC1A-205ENST00000469129 PCLOQ9Y6V0 5065 aa5.38□□□□□ -1.55
SMC1A-205ENST00000469129 ABCA13Q86UQ4 5058 aa5.37□□□□□ -1.55
SMC1A-205ENST00000469129 MP68P56378 58 aa5.37□□□□□ -1.55
SMC1A-205ENST00000469129 C1orf195Q5TG92 126 aa5.37□□□□□ -1.55
SMC1A-205ENST00000469129 MRPL34Q9BQ48 92 aaKnown RBP5.37□□□□□ -1.55
SMC1A-205ENST00000469129 A0A0U1RQV1 116 aa5.36□□□□□ -1.55
SMC1A-205ENST00000469129 H3BPC8 53 aa5.36□□□□□ -1.55
SMC1A-205ENST00000469129 PKHD1L1Q86WI1 4243 aa5.35□□□□□ -1.55
SMC1A-205ENST00000469129 SNURFQ9Y675 71 aa5.35□□□□□ -1.55
SMC1A-205ENST00000469129 TRAV22A0A0B4J277 110 aa5.33□□□□□ -1.56
SMC1A-205ENST00000469129 H0Y9P7 68 aa5.33□□□□□ -1.56
SMC1A-205ENST00000469129 NDUFS5O43920 106 aa5.33□□□□□ -1.56
SMC1A-205ENST00000469129 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
SMC1A-205ENST00000469129 H7BZZ5 65 aa5.32□□□□□ -1.56
SMC1A-205ENST00000469129 LINC00313P59037 77 aa5.32□□□□□ -1.56
SMC1A-205ENST00000469129 CYSTM1Q9H1C7 97 aa5.32□□□□□ -1.56
SMC1A-205ENST00000469129 FAM236DA0A1B0GTK5 79 aa5.31□□□□□ -1.56
SMC1A-205ENST00000469129 FAM236CP0DP71 79 aa5.31□□□□□ -1.56
SMC1A-205ENST00000469129 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
SMC1A-205ENST00000469129 ZCCHC13Q8WW36 166 aaKnown RBP5.29□□□□□ -1.56
SMC1A-205ENST00000469129 LINC00208Q96KT6 92 aa5.28□□□□□ -1.56
SMC1A-205ENST00000469129 Q8N9P0 234 aaPredicted RBP5.26□□□□□ -1.57
SMC1A-205ENST00000469129 C1orf64Q8NEQ6 169 aa5.26□□□□□ -1.57
SMC1A-205ENST00000469129 FLG2Q5D862 2391 aaPredicted RBP5.24□□□□□ -1.57
SMC1A-205ENST00000469129 LOC101927531A0A1B0GV80 90 aa5.24□□□□□ -1.57
SMC1A-205ENST00000469129 KRTAP16-1A8MUX0 517 aa5.24□□□□□ -1.57
SMC1A-205ENST00000469129 KRTAP10-8P60410 259 aa5.24□□□□□ -1.57
SMC1A-205ENST00000469129 MYCBP2O75592 4640 aa5.24□□□□□ -1.57
SMC1A-205ENST00000469129 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
SMC1A-205ENST00000469129 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
SMC1A-205ENST00000469129 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
SMC1A-205ENST00000469129 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
SMC1A-205ENST00000469129 DMBT1Q9UGM3 2413 aaPredicted RBP5.19□□□□□ -1.58
SMC1A-205ENST00000469129 OXTP01178 125 aa5.19□□□□□ -1.58
SMC1A-205ENST00000469129 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
SMC1A-205ENST00000469129 J3QL48 77 aa5.18□□□□□ -1.58
SMC1A-205ENST00000469129 Q5W150 140 aa5.17□□□□□ -1.58
SMC1A-205ENST00000469129 RETNLBQ9BQ08 111 aa5.17□□□□□ -1.58
SMC1A-205ENST00000469129 CYP4F30PQ9H0H9 118 aa5.17□□□□□ -1.58
SMC1A-205ENST00000469129 FAT3Q8TDW7 4589 aa5.17□□□□□ -1.58
SMC1A-205ENST00000469129 LRP1Q07954 4544 aaKnown RBP5.16□□□□□ -1.58
SMC1A-205ENST00000469129 HERC1Q15751 4861 aa5.15□□□□□ -1.58
SMC1A-205ENST00000469129 C20orf166-AS1Q96NR2 134 aa5.15□□□□□ -1.59
SMC1A-205ENST00000469129 C9orf92A6NGG3 77 aa5.14□□□□□ -1.59
SMC1A-205ENST00000469129 A8MUU9 505 aa5.14□□□□□ -1.59
SMC1A-205ENST00000469129 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
SMC1A-205ENST00000469129 IGKV2-30P06310 120 aa5.13□□□□□ -1.59
SMC1A-205ENST00000469129 MT1HL1P0DM35 61 aa5.13□□□□□ -1.59
SMC1A-205ENST00000469129 IGLV7-46A0A075B6I9 117 aa5.12□□□□□ -1.59
SMC1A-205ENST00000469129 TNXBP22105 4242 aa5.11□□□□□ -1.59
SMC1A-205ENST00000469129 C7orf65Q6ZTY9 151 aa5.1□□□□□ -1.59
SMC1A-205ENST00000469129 Q75L30 129 aa5.1□□□□□ -1.59
SMC1A-205ENST00000469129 PRR4Q16378 134 aa5.09□□□□□ -1.59
SMC1A-205ENST00000469129 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
SMC1A-205ENST00000469129 SMIM26A0A096LP01 95 aa5.08□□□□□ -1.6
SMC1A-205ENST00000469129 HRES1P13985 223 aa5.06□□□□□ -1.6
SMC1A-205ENST00000469129 RPL37P61927 97 aaKnown RBP5.03□□□□□ -1.6
SMC1A-205ENST00000469129 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
SMC1A-205ENST00000469129 COA5Q86WW8 74 aa5.03□□□□□ -1.6
SMC1A-205ENST00000469129 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
SMC1A-205ENST00000469129 ACYP2P14621 99 aa5.02□□□□□ -1.61
SMC1A-205ENST00000469129 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
SMC1A-205ENST00000469129 XP32Q5T750 250 aa5.02□□□□□ -1.61
SMC1A-205ENST00000469129 A8MUN3 132 aa4.99□□□□□ -1.61
SMC1A-205ENST00000469129 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
SMC1A-205ENST00000469129 V9GYY9 64 aa4.98□□□□□ -1.61
SMC1A-205ENST00000469129 CHKB-CPT1BH3BT56 60 aa4.96□□□□□ -1.62
SMC1A-205ENST00000469129 SPINK7P58062 85 aa4.96□□□□□ -1.62
SMC1A-205ENST00000469129 Q1T7F1 81 aa4.95□□□□□ -1.62
SMC1A-205ENST00000469129 MPLKIPQ8TAP9 179 aa4.93□□□□□ -1.62
SMC1A-205ENST00000469129 C4orf26Q17RF5 130 aa4.91□□□□□ -1.62
SMC1A-205ENST00000469129 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
SMC1A-205ENST00000469129 SPTSSBQ8NFR3 76 aa4.89□□□□□ -1.63
SMC1A-205ENST00000469129 LCE2BO14633 110 aa4.87□□□□□ -1.63
SMC1A-205ENST00000469129 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
SMC1A-205ENST00000469129 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
SMC1A-205ENST00000469129 LRP2P98164 4655 aa4.85□□□□□ -1.63
SMC1A-205ENST00000469129 UBR4Q5T4S7 5183 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms