RNA–Protein interactions for RNA: ENST00000468937.2

SYNE1-218, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 688 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-218ENST00000468937 LINC00575Q6W349 94 aa2.17□□□□□ -2.06
SYNE1-218ENST00000468937 Q6ZRX8 168 aa2.17□□□□□ -2.06
SYNE1-218ENST00000468937 CLEC2BQ92478 149 aa2.17□□□□□ -2.06
SYNE1-218ENST00000468937 DIRC1Q969H9 104 aa2.17□□□□□ -2.06
SYNE1-218ENST00000468937 SPCS1Q9Y6A9 102 aa2.17□□□□□ -2.06
SYNE1-218ENST00000468937 TRBV20-1A0A075B6N2 111 aa2.16□□□□□ -2.06
SYNE1-218ENST00000468937 A0A1B0GX51 115 aa2.16□□□□□ -2.06
SYNE1-218ENST00000468937 H3BMG7 143 aa2.16□□□□□ -2.06
SYNE1-218ENST00000468937 TRACP01848 142 aa2.16□□□□□ -2.06
SYNE1-218ENST00000468937 SCGB1C2P0DMR2 95 aa2.16□□□□□ -2.06
SYNE1-218ENST00000468937 HAMPP81172 84 aa2.16□□□□□ -2.06
SYNE1-218ENST00000468937 LINC01600Q96MT4 127 aa2.16□□□□□ -2.06
SYNE1-218ENST00000468937 Q9BRP9 147 aa2.16□□□□□ -2.06
SYNE1-218ENST00000468937 PSORS1C2Q9UIG4 136 aa2.16□□□□□ -2.06
SYNE1-218ENST00000468937 COX7BP24311 80 aa2.15□□□□□ -2.07
SYNE1-218ENST00000468937 UBE2BP63146 152 aa2.15□□□□□ -2.07
SYNE1-218ENST00000468937 PRLHP81277 87 aa2.15□□□□□ -2.07
SYNE1-218ENST00000468937 ATXN8Q156A1 80 aa2.15□□□□□ -2.07
SYNE1-218ENST00000468937 GTF2H5Q6ZYL4 71 aa2.15□□□□□ -2.07
SYNE1-218ENST00000468937 SMCR5Q8TEV8 140 aa2.15□□□□□ -2.07
SYNE1-218ENST00000468937 DPH3Q96FX2 82 aa2.15□□□□□ -2.07
SYNE1-218ENST00000468937 C8orf17Q9NRJ1 99 aa2.15□□□□□ -2.07
SYNE1-218ENST00000468937 ETDCA0A1B0GVM5 59 aa2.14□□□□□ -2.07
SYNE1-218ENST00000468937 hADV29S1A0JD25 119 aa2.14□□□□□ -2.07
SYNE1-218ENST00000468937 C9JAW5 83 aa2.14□□□□□ -2.07
SYNE1-218ENST00000468937 H3BT86 120 aa2.14□□□□□ -2.07
SYNE1-218ENST00000468937 SLC25A20O43772 301 aa2.14□□□□□ -2.07
SYNE1-218ENST00000468937 BCE1O60756 84 aa2.14□□□□□ -2.07
SYNE1-218ENST00000468937 ERC2-IT1O76042 136 aa2.14□□□□□ -2.07
SYNE1-218ENST00000468937 Q6ZQY7 126 aa2.14□□□□□ -2.07
SYNE1-218ENST00000468937 FAM19A1Q7Z5A9 133 aa2.14□□□□□ -2.07
SYNE1-218ENST00000468937 IGLV5-48A0A075B6I7 105 aa2.13□□□□□ -2.07
SYNE1-218ENST00000468937 F8W1H4 67 aa2.13□□□□□ -2.07
SYNE1-218ENST00000468937 RPL37AP61513 92 aaKnown RBP2.13□□□□□ -2.07
SYNE1-218ENST00000468937 C1orf137Q5JT78 98 aa2.13□□□□□ -2.07
SYNE1-218ENST00000468937 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.13□□□□□ -2.07
SYNE1-218ENST00000468937 ANKRD29Q8N6D5 301 aa2.13□□□□□ -2.07
SYNE1-218ENST00000468937 ORMDL1Q9P0S3 153 aa2.13□□□□□ -2.07
SYNE1-218ENST00000468937 DNAL4O96015 105 aa2.12□□□□□ -2.07
SYNE1-218ENST00000468937 IGLV7-43P04211 117 aa2.12□□□□□ -2.07
SYNE1-218ENST00000468937 BAALC-AS2P0C853 105 aa2.12□□□□□ -2.07
SYNE1-218ENST00000468937 MT1HL1P0DM35 61 aa2.12□□□□□ -2.07
SYNE1-218ENST00000468937 SPRR1BP22528 89 aa2.12□□□□□ -2.07
SYNE1-218ENST00000468937 OCIAD2Q56VL3 154 aa2.12□□□□□ -2.07
SYNE1-218ENST00000468937 HIGD2AQ9BW72 106 aa2.12□□□□□ -2.07
SYNE1-218ENST00000468937 MUC2Q02817 5179 aa2.12□□□□□ -2.07
SYNE1-218ENST00000468937 TMEM256-PLSCR3K7ERE1 68 aa2.11□□□□□ -2.07
SYNE1-218ENST00000468937 SNCGO76070 127 aa2.11□□□□□ -2.07
SYNE1-218ENST00000468937 ETDBQ3ZM63 59 aa2.11□□□□□ -2.07
SYNE1-218ENST00000468937 TEN1Q86WV5 123 aa2.11□□□□□ -2.07
SYNE1-218ENST00000468937 PPDPFLQ8WWR9 84 aa2.11□□□□□ -2.07
SYNE1-218ENST00000468937 OBSCN-AS1Q96MR7 158 aa2.11□□□□□ -2.07
SYNE1-218ENST00000468937 SPRR4Q96PI1 79 aa2.11□□□□□ -2.07
SYNE1-218ENST00000468937 TEX49A0A1B0GTD5 131 aa2.1□□□□□ -2.07
SYNE1-218ENST00000468937 H3BQ85 93 aa2.1□□□□□ -2.07
SYNE1-218ENST00000468937 C3orf22Q8N5N4 141 aa2.1□□□□□ -2.07
SYNE1-218ENST00000468937 TRBV7-4A0A0J9YYF1 115 aa2.09□□□□□ -2.07
SYNE1-218ENST00000468937 FAM240AA0A1B0GVK7 77 aa2.09□□□□□ -2.07
SYNE1-218ENST00000468937 JMJD7-PLA2G4BH0Y9G9 81 aa2.09□□□□□ -2.07
SYNE1-218ENST00000468937 DEFB105AQ8NG35 78 aa2.09□□□□□ -2.07
SYNE1-218ENST00000468937 ZNF706Q9Y5V0 76 aaPredicted RBP2.09□□□□□ -2.07
SYNE1-218ENST00000468937 LPAP08519 4548 aa2.09□□□□□ -2.08
SYNE1-218ENST00000468937 SPINK6Q6UWN8 80 aa2.08□□□□□ -2.08
SYNE1-218ENST00000468937 Q6ZQT0 140 aa2.08□□□□□ -2.08
SYNE1-218ENST00000468937 C14orf132Q9NPU4 83 aa2.08□□□□□ -2.08
SYNE1-218ENST00000468937 LAMTOR3Q9UHA4 124 aa2.08□□□□□ -2.08
SYNE1-218ENST00000468937 LOC110117498A0A087WWA1 95 aa2.07□□□□□ -2.08
SYNE1-218ENST00000468937 A0A1B0GV72 72 aa2.07□□□□□ -2.08
SYNE1-218ENST00000468937 RBM3P98179 157 aaKnown RBP2.07□□□□□ -2.08
SYNE1-218ENST00000468937 CD164Q04900 197 aa2.07□□□□□ -2.08
SYNE1-218ENST00000468937 FAM229BQ4G0N7 80 aa2.07□□□□□ -2.08
SYNE1-218ENST00000468937 FAT4Q6V0I7 4981 aa2.06□□□□□ -2.08
SYNE1-218ENST00000468937 A0A0G2JQZ4 141 aa2.06□□□□□ -2.08
SYNE1-218ENST00000468937 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
SYNE1-218ENST00000468937 F8WEM9 126 aa2.06□□□□□ -2.08
SYNE1-218ENST00000468937 CCKP06307 115 aa2.06□□□□□ -2.08
SYNE1-218ENST00000468937 DSCR8Q96T75 97 aa2.06□□□□□ -2.08
SYNE1-218ENST00000468937 CRCT1Q9UGL9 99 aa2.06□□□□□ -2.08
SYNE1-218ENST00000468937 PDE6GP18545 87 aa2.05□□□□□ -2.08
SYNE1-218ENST00000468937 Q6JHZ5 121 aa2.05□□□□□ -2.08
SYNE1-218ENST00000468937 Q6Q795 121 aa2.05□□□□□ -2.08
SYNE1-218ENST00000468937 SMIM26A0A096LP01 95 aa2.04□□□□□ -2.08
SYNE1-218ENST00000468937 A0A1B0GW54 56 aa2.04□□□□□ -2.08
SYNE1-218ENST00000468937 J3QR89 54 aa2.04□□□□□ -2.08
SYNE1-218ENST00000468937 K7ERU9 68 aa2.04□□□□□ -2.08
SYNE1-218ENST00000468937 CRYGAP11844 174 aa2.04□□□□□ -2.08
SYNE1-218ENST00000468937 C9orf153Q5TBE3 101 aa2.04□□□□□ -2.08
SYNE1-218ENST00000468937 SSBP3-AS1Q7Z2R9 100 aa2.04□□□□□ -2.08
SYNE1-218ENST00000468937 ADM2Q7Z4H4 148 aa2.04□□□□□ -2.08
SYNE1-218ENST00000468937 LINC00846Q9NV44 126 aa2.04□□□□□ -2.08
SYNE1-218ENST00000468937 TRBV7-7A0A0K0K1E9 115 aa2.03□□□□□ -2.08
SYNE1-218ENST00000468937 NDUFS5O43920 106 aa2.03□□□□□ -2.08
SYNE1-218ENST00000468937 ACYP1P07311 99 aa2.03□□□□□ -2.08
SYNE1-218ENST00000468937 VPS25Q9BRG1 176 aa2.03□□□□□ -2.08
SYNE1-218ENST00000468937 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
SYNE1-218ENST00000468937 A0A087WSZ3 146 aa2.02□□□□□ -2.09
SYNE1-218ENST00000468937 PSPHP1O15172 72 aa2.02□□□□□ -2.09
SYNE1-218ENST00000468937 Q96NJ1 140 aa2.02□□□□□ -2.09
SYNE1-218ENST00000468937 PRO0628Q9UI54 55 aa2.02□□□□□ -2.09
SYNE1-218ENST00000468937 RPS29P62273 56 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms