RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 IGKV4-1P06312 121 aa7.95□□□□□ -1.14
TMEM39A-205ENST00000468676 COL5A1-AS1Q5SY13 56 aa7.95□□□□□ -1.14
TMEM39A-205ENST00000468676 SIGMAR1Q99720 223 aa7.95□□□□□ -1.14
TMEM39A-205ENST00000468676 H3BT86 120 aa7.94□□□□□ -1.14
TMEM39A-205ENST00000468676 LINC00472Q9H8W2 130 aa7.94□□□□□ -1.14
TMEM39A-205ENST00000468676 Q6ZQT0 140 aa7.93□□□□□ -1.14
TMEM39A-205ENST00000468676 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
TMEM39A-205ENST00000468676 Q75L30 129 aa7.92□□□□□ -1.14
TMEM39A-205ENST00000468676 J3KT08 172 aa7.89□□□□□ -1.15
TMEM39A-205ENST00000468676 LINC00313P59037 77 aa7.89□□□□□ -1.15
TMEM39A-205ENST00000468676 C14orf132Q9NPU4 83 aa7.89□□□□□ -1.15
TMEM39A-205ENST00000468676 SPCS1Q9Y6A9 102 aa7.89□□□□□ -1.15
TMEM39A-205ENST00000468676 DEFB116Q30KQ4 102 aa7.88□□□□□ -1.15
TMEM39A-205ENST00000468676 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
TMEM39A-205ENST00000468676 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
TMEM39A-205ENST00000468676 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
TMEM39A-205ENST00000468676 KRTAP4-8A0A0G2JLE6 195 aa7.86□□□□□ -1.15
TMEM39A-205ENST00000468676 DSCR10P59022 87 aa7.86□□□□□ -1.15
TMEM39A-205ENST00000468676 A8MUU9 505 aa7.85□□□□□ -1.15
TMEM39A-205ENST00000468676 MTURNQ8N3F0 131 aa7.84□□□□□ -1.15
TMEM39A-205ENST00000468676 IGHV6-1A0A0B4J1U7 121 aa7.83□□□□□ -1.16
TMEM39A-205ENST00000468676 PCP4L1A6NKN8 68 aa7.83□□□□□ -1.16
TMEM39A-205ENST00000468676 C8orf87E5RJ46 101 aa7.83□□□□□ -1.16
TMEM39A-205ENST00000468676 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
TMEM39A-205ENST00000468676 NDUFB1O75438 58 aa7.81□□□□□ -1.16
TMEM39A-205ENST00000468676 K7EP34 96 aa7.8□□□□□ -1.16
TMEM39A-205ENST00000468676 NREPQ16612 68 aa7.8□□□□□ -1.16
TMEM39A-205ENST00000468676 KRTAP16-1A8MUX0 517 aa7.79□□□□□ -1.16
TMEM39A-205ENST00000468676 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
TMEM39A-205ENST00000468676 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
TMEM39A-205ENST00000468676 A8MWP4 228 aa7.76□□□□□ -1.17
TMEM39A-205ENST00000468676 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
TMEM39A-205ENST00000468676 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
TMEM39A-205ENST00000468676 KRTAP19-2Q3LHN2 52 aa7.72□□□□□ -1.17
TMEM39A-205ENST00000468676 IGKV3D-7A0A0C4DH55 119 aa7.7□□□□□ -1.18
TMEM39A-205ENST00000468676 F8W1H4 67 aa7.7□□□□□ -1.18
TMEM39A-205ENST00000468676 PRR15Q8IV56 129 aa7.7□□□□□ -1.18
TMEM39A-205ENST00000468676 C8orf17Q9NRJ1 99 aa7.7□□□□□ -1.18
TMEM39A-205ENST00000468676 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
TMEM39A-205ENST00000468676 BPY2O14599 106 aa7.67□□□□□ -1.18
TMEM39A-205ENST00000468676 Q8N9P0 234 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-205ENST00000468676 Q6ZVQ6 151 aa7.65□□□□□ -1.18
TMEM39A-205ENST00000468676 UBL5Q9BZL1 73 aa7.63□□□□□ -1.19
TMEM39A-205ENST00000468676 ZCCHC13Q8WW36 166 aaKnown RBP7.62□□□□□ -1.19
TMEM39A-205ENST00000468676 K7EQZ3 153 aa7.61□□□□□ -1.19
TMEM39A-205ENST00000468676 MT1HP80294 61 aa7.61□□□□□ -1.19
TMEM39A-205ENST00000468676 MMP24-AS1A0A0U1RRL7 71 aa7.6□□□□□ -1.19
TMEM39A-205ENST00000468676 ETDBQ3ZM63 59 aa7.6□□□□□ -1.19
TMEM39A-205ENST00000468676 TMEM254Q8TBM7 123 aa7.6□□□□□ -1.19
TMEM39A-205ENST00000468676 KRTAP4-7Q9BYR0 210 aa7.6□□□□□ -1.19
TMEM39A-205ENST00000468676 LINC00846Q9NV44 126 aa7.6□□□□□ -1.19
TMEM39A-205ENST00000468676 MRPL34Q9BQ48 92 aaKnown RBP7.59□□□□□ -1.19
TMEM39A-205ENST00000468676 hDV103S1A0JD37 113 aa7.58□□□□□ -1.2
TMEM39A-205ENST00000468676 RBM12B-AS1Q9P1G2 102 aa7.54□□□□□ -1.2
TMEM39A-205ENST00000468676 FLGP20930 4061 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-205ENST00000468676 M0R2T5 61 aa7.53□□□□□ -1.2
TMEM39A-205ENST00000468676 NDUFS5O43920 106 aa7.51□□□□□ -1.21
TMEM39A-205ENST00000468676 HRES1P13985 223 aa7.51□□□□□ -1.21
TMEM39A-205ENST00000468676 SPINK7P58062 85 aa7.51□□□□□ -1.21
TMEM39A-205ENST00000468676 CASC2Q6XLA1 102 aa7.51□□□□□ -1.21
TMEM39A-205ENST00000468676 Q8N9L7 120 aa7.51□□□□□ -1.21
TMEM39A-205ENST00000468676 MPLKIPQ8TAP9 179 aa7.5□□□□□ -1.21
TMEM39A-205ENST00000468676 FAM236DA0A1B0GTK5 79 aa7.49□□□□□ -1.21
TMEM39A-205ENST00000468676 FAM236CP0DP71 79 aa7.49□□□□□ -1.21
TMEM39A-205ENST00000468676 LCE1DQ5T752 114 aa7.49□□□□□ -1.21
TMEM39A-205ENST00000468676 ACYP1P07311 99 aa7.48□□□□□ -1.21
TMEM39A-205ENST00000468676 CXCL6P80162 114 aa7.48□□□□□ -1.21
TMEM39A-205ENST00000468676 WFDC13Q8IUB5 93 aa7.48□□□□□ -1.21
TMEM39A-205ENST00000468676 HCG22E2RYF7 251 aa7.45□□□□□ -1.22
TMEM39A-205ENST00000468676 KRTAP10-6P60371 365 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-205ENST00000468676 FAM240AA0A1B0GVK7 77 aa7.44□□□□□ -1.22
TMEM39A-205ENST00000468676 A0A1B0GV90 55 aa7.4□□□□□ -1.22
TMEM39A-205ENST00000468676 Q5W150 140 aa7.38□□□□□ -1.23
TMEM39A-205ENST00000468676 ATP5EP2Q5VTU8 51 aa7.37□□□□□ -1.23
TMEM39A-205ENST00000468676 C7orf65Q6ZTY9 151 aa7.36□□□□□ -1.23
TMEM39A-205ENST00000468676 KRTAP4-9Q9BYQ8 210 aa7.36□□□□□ -1.23
TMEM39A-205ENST00000468676 TP53AIP1Q9HCN2 124 aa7.35□□□□□ -1.23
TMEM39A-205ENST00000468676 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
TMEM39A-205ENST00000468676 IGKV2-30P06310 120 aa7.34□□□□□ -1.23
TMEM39A-205ENST00000468676 KRTAP4-2Q9BYR5 136 aa7.32□□□□□ -1.24
TMEM39A-205ENST00000468676 LINC00643Q86TS7 51 aa7.28□□□□□ -1.24
TMEM39A-205ENST00000468676 J3QR89 54 aa7.26□□□□□ -1.25
TMEM39A-205ENST00000468676 HIST1H4AP62805 103 aaKnown RBP7.26□□□□□ -1.25
TMEM39A-205ENST00000468676 H1FX-AS1Q4G0G2 97 aa7.24□□□□□ -1.25
TMEM39A-205ENST00000468676 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
TMEM39A-205ENST00000468676 C4orf26Q17RF5 130 aa7.19□□□□□ -1.26
TMEM39A-205ENST00000468676 TRAV22A0A0B4J277 110 aa7.17□□□□□ -1.26
TMEM39A-205ENST00000468676 UQCRQO14949 82 aa7.16□□□□□ -1.26
TMEM39A-205ENST00000468676 MT2AP02795 61 aa7.15□□□□□ -1.26
TMEM39A-205ENST00000468676 A0A087WVE0 104 aa7.13□□□□□ -1.27
TMEM39A-205ENST00000468676 LOC101927531A0A1B0GV80 90 aa7.13□□□□□ -1.27
TMEM39A-205ENST00000468676 ATOX1O00244 68 aa7.13□□□□□ -1.27
TMEM39A-205ENST00000468676 CYP4F30PQ9H0H9 118 aa7.13□□□□□ -1.27
TMEM39A-205ENST00000468676 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
TMEM39A-205ENST00000468676 C1orf64Q8NEQ6 169 aa7.1□□□□□ -1.27
TMEM39A-205ENST00000468676 H0Y9P7 68 aa7.08□□□□□ -1.28
TMEM39A-205ENST00000468676 MT1FP04733 61 aa7.08□□□□□ -1.28
TMEM39A-205ENST00000468676 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
TMEM39A-205ENST00000468676 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
TMEM39A-205ENST00000468676 K7ERU9 68 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms