RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 LINC01554Q52M75 96 aa8.11□□□□□ -1.11
SHANK2-214ENST00000468619 H3BS24 57 aa8.1□□□□□ -1.11
SHANK2-214ENST00000468619 NUPR2A6NF83 97 aa8.1□□□□□ -1.11
SHANK2-214ENST00000468619 CHTF8P0CG12 524 aa8.1□□□□□ -1.11
SHANK2-214ENST00000468619 UBE2DNLQ8IWF7 75 aa8.1□□□□□ -1.11
SHANK2-214ENST00000468619 DNAH10Q8IVF4 4471 aa8.09□□□□□ -1.11
SHANK2-214ENST00000468619 IGLV9-49A0A0B4J1Y8 123 aa8.09□□□□□ -1.11
SHANK2-214ENST00000468619 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
SHANK2-214ENST00000468619 A0A087X002 238 aa8.06□□□□□ -1.12
SHANK2-214ENST00000468619 NOTCH2NLQ7Z3S9 236 aa8.06□□□□□ -1.12
SHANK2-214ENST00000468619 MRPL34Q9BQ48 92 aaKnown RBP8.05□□□□□ -1.12
SHANK2-214ENST00000468619 KRTAP1-5Q9BYS1 174 aa8.05□□□□□ -1.12
SHANK2-214ENST00000468619 A0A1B0GVX0 72 aa8.04□□□□□ -1.12
SHANK2-214ENST00000468619 VPS13DQ5THJ4 4388 aa8.03□□□□□ -1.12
SHANK2-214ENST00000468619 CDK2AP2O75956 126 aa8.02□□□□□ -1.13
SHANK2-214ENST00000468619 Q5W150 140 aa8.01□□□□□ -1.13
SHANK2-214ENST00000468619 KMT2AQ03164 3969 aa8.01□□□□□ -1.13
SHANK2-214ENST00000468619 RTL8CO15255 209 aa8□□□□□ -1.13
SHANK2-214ENST00000468619 ACYP2P14621 99 aa7.99□□□□□ -1.13
SHANK2-214ENST00000468619 A0A1B0GU69 56 aa7.99□□□□□ -1.13
SHANK2-214ENST00000468619 WWC2-AS2Q96NR7 200 aa7.96□□□□□ -1.14
SHANK2-214ENST00000468619 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
SHANK2-214ENST00000468619 NBDYA0A0U1RRE5 68 aa7.95□□□□□ -1.14
SHANK2-214ENST00000468619 CSAG1Q6PB30 78 aa7.94□□□□□ -1.14
SHANK2-214ENST00000468619 ALMS1Q8TCU4 4167 aa7.94□□□□□ -1.14
SHANK2-214ENST00000468619 MIR22HGQ0VDD5 57 aa7.93□□□□□ -1.14
SHANK2-214ENST00000468619 SPINK6Q6UWN8 80 aa7.93□□□□□ -1.14
SHANK2-214ENST00000468619 DNAH2Q9P225 4427 aa7.93□□□□□ -1.14
SHANK2-214ENST00000468619 ANAPC11Q9NYG5 84 aa7.91□□□□□ -1.14
SHANK2-214ENST00000468619 PANO1I0J062 215 aa7.91□□□□□ -1.14
SHANK2-214ENST00000468619 LY6G6CO95867 125 aa7.91□□□□□ -1.14
SHANK2-214ENST00000468619 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
SHANK2-214ENST00000468619 KRTAP13-3Q3SY46 172 aa7.9□□□□□ -1.14
SHANK2-214ENST00000468619 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.15
SHANK2-214ENST00000468619 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
SHANK2-214ENST00000468619 UQCR11O14957 56 aa7.88□□□□□ -1.15
SHANK2-214ENST00000468619 HYDINQ4G0P3 5121 aa7.88□□□□□ -1.15
SHANK2-214ENST00000468619 Q6ZRN7 208 aaPredicted RBP7.86□□□□□ -1.15
SHANK2-214ENST00000468619 DNAH6Q9C0G6 4158 aa7.84□□□□□ -1.15
SHANK2-214ENST00000468619 HECTD4Q9Y4D8 3996 aa7.82□□□□□ -1.16
SHANK2-214ENST00000468619 FRAS1Q86XX4 4008 aa7.81□□□□□ -1.16
SHANK2-214ENST00000468619 LINC00483Q53H64 154 aa7.81□□□□□ -1.16
SHANK2-214ENST00000468619 C14orf177Q52M58 125 aa7.79□□□□□ -1.16
SHANK2-214ENST00000468619 DNAH17Q9UFH2 4485 aa7.79□□□□□ -1.16
SHANK2-214ENST00000468619 C1orf134Q5TEV5 83 aa7.78□□□□□ -1.16
SHANK2-214ENST00000468619 SACSQ9NZJ4 4579 aa7.77□□□□□ -1.16
SHANK2-214ENST00000468619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
SHANK2-214ENST00000468619 A0A087WTM6 91 aa7.76□□□□□ -1.17
SHANK2-214ENST00000468619 ZNF861PO60384 105 aa7.76□□□□□ -1.17
SHANK2-214ENST00000468619 ZNF706Q9Y5V0 76 aaPredicted RBP7.74□□□□□ -1.17
SHANK2-214ENST00000468619 CIRBP-AS1Q8TBR5 109 aa7.73□□□□□ -1.17
SHANK2-214ENST00000468619 IGKV2-30P06310 120 aa7.71□□□□□ -1.17
SHANK2-214ENST00000468619 FAT2Q9NYQ8 4349 aa7.71□□□□□ -1.18
SHANK2-214ENST00000468619 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.18
SHANK2-214ENST00000468619 DNAH11Q96DT5 4516 aa7.71□□□□□ -1.18
SHANK2-214ENST00000468619 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
SHANK2-214ENST00000468619 DNAH8Q96JB1 4490 aa7.69□□□□□ -1.18
SHANK2-214ENST00000468619 DNAH5Q8TE73 4624 aa7.69□□□□□ -1.18
SHANK2-214ENST00000468619 SPACA4Q8TDM5 124 aa7.69□□□□□ -1.18
SHANK2-214ENST00000468619 IGKV2D-30A0A075B6S6 120 aa7.68□□□□□ -1.18
SHANK2-214ENST00000468619 SPINK1P00995 79 aa7.68□□□□□ -1.18
SHANK2-214ENST00000468619 KMT2CQ8NEZ4 4911 aaKnown RBP7.67□□□□□ -1.18
SHANK2-214ENST00000468619 IGLV7-43P04211 117 aa7.67□□□□□ -1.18
SHANK2-214ENST00000468619 PKD1P98161 4303 aa7.67□□□□□ -1.18
SHANK2-214ENST00000468619 IGLV5-52A0A0A0MRZ9 124 aa7.65□□□□□ -1.18
SHANK2-214ENST00000468619 KRTAP10-2P60368 255 aa7.63□□□□□ -1.19
SHANK2-214ENST00000468619 RYR2Q92736 4967 aa7.63□□□□□ -1.19
SHANK2-214ENST00000468619 FLG2Q5D862 2391 aaPredicted RBP7.61□□□□□ -1.19
SHANK2-214ENST00000468619 ROMO1P60602 79 aa7.6□□□□□ -1.19
SHANK2-214ENST00000468619 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
SHANK2-214ENST00000468619 PKHD1P08F94 4074 aa7.58□□□□□ -1.2
SHANK2-214ENST00000468619 A8MUU9 505 aa7.57□□□□□ -1.2
SHANK2-214ENST00000468619 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
SHANK2-214ENST00000468619 H0YAA0 97 aa7.55□□□□□ -1.2
SHANK2-214ENST00000468619 Q8N1X5 172 aa7.55□□□□□ -1.2
SHANK2-214ENST00000468619 Q6ZSA8 131 aa7.54□□□□□ -1.2
SHANK2-214ENST00000468619 CRIPTQ9P021 101 aa7.54□□□□□ -1.2
SHANK2-214ENST00000468619 KRTAP16-1A8MUX0 517 aa7.52□□□□□ -1.21
SHANK2-214ENST00000468619 KRTAP10-1P60331 282 aa7.52□□□□□ -1.21
SHANK2-214ENST00000468619 RYR3Q15413 4870 aa7.51□□□□□ -1.21
SHANK2-214ENST00000468619 SSBP3-AS1Q7Z2R9 100 aa7.49□□□□□ -1.21
SHANK2-214ENST00000468619 LRP1BQ9NZR2 4599 aa7.48□□□□□ -1.21
SHANK2-214ENST00000468619 TYMSOSQ8TAI1 123 aa7.47□□□□□ -1.21
SHANK2-214ENST00000468619 DYNC1H1Q14204 4646 aaKnown RBP7.46□□□□□ -1.22
SHANK2-214ENST00000468619 A0A1B0GVY2 172 aa7.43□□□□□ -1.22
SHANK2-214ENST00000468619 P0C880 135 aa7.43□□□□□ -1.22
SHANK2-214ENST00000468619 A0A1B0GU33 70 aa7.42□□□□□ -1.22
SHANK2-214ENST00000468619 KRTAP13-2Q52LG2 175 aa7.4□□□□□ -1.23
SHANK2-214ENST00000468619 VPS13BQ7Z7G8 4022 aa7.39□□□□□ -1.23
SHANK2-214ENST00000468619 APOBP04114 4563 aaKnown RBP7.37□□□□□ -1.23
SHANK2-214ENST00000468619 H1FX-AS1Q4G0G2 97 aa7.35□□□□□ -1.23
SHANK2-214ENST00000468619 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
SHANK2-214ENST00000468619 FAT1Q14517 4588 aa7.3□□□□□ -1.24
SHANK2-214ENST00000468619 K7ERS5 55 aa7.28□□□□□ -1.24
SHANK2-214ENST00000468619 EPPK1P58107 5090 aaKnown RBP7.25□□□□□ -1.25
SHANK2-214ENST00000468619 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
SHANK2-214ENST00000468619 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
SHANK2-214ENST00000468619 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.25
SHANK2-214ENST00000468619 DMBT1Q9UGM3 2413 aaPredicted RBP7.21□□□□□ -1.25
SHANK2-214ENST00000468619 HSPG2P98160 4391 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms