RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
MSH5-213ENST00000468136 MMP24-AS1A0A0U1RRL7 71 aa5.92□□□□□ -1.46
MSH5-213ENST00000468136 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
MSH5-213ENST00000468136 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
MSH5-213ENST00000468136 KRTAP10-4P60372 401 aaPredicted RBP5.91□□□□□ -1.46
MSH5-213ENST00000468136 TMEM258P61165 79 aa5.91□□□□□ -1.46
MSH5-213ENST00000468136 C20orf197Q8N268 126 aa5.91□□□□□ -1.46
MSH5-213ENST00000468136 LINC00304Q8N9R0 145 aa5.91□□□□□ -1.46
MSH5-213ENST00000468136 TMEM254Q8TBM7 123 aa5.91□□□□□ -1.46
MSH5-213ENST00000468136 SRRM2Q9UQ35 2752 aaKnown RBP5.9□□□□□ -1.46
MSH5-213ENST00000468136 MP68P56378 58 aa5.9□□□□□ -1.46
MSH5-213ENST00000468136 WFDC13Q8IUB5 93 aa5.9□□□□□ -1.46
MSH5-213ENST00000468136 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
MSH5-213ENST00000468136 IGHV6-1A0A0B4J1U7 121 aa5.88□□□□□ -1.47
MSH5-213ENST00000468136 C1orf195Q5TG92 126 aa5.88□□□□□ -1.47
MSH5-213ENST00000468136 A0A0U1RQV1 116 aa5.87□□□□□ -1.47
MSH5-213ENST00000468136 ATP5EP56381 51 aaPredicted RBP5.87□□□□□ -1.47
MSH5-213ENST00000468136 MRPL34Q9BQ48 92 aaKnown RBP5.87□□□□□ -1.47
MSH5-213ENST00000468136 PRR26Q8N8Z3 221 aa5.86□□□□□ -1.47
MSH5-213ENST00000468136 APOBP04114 4563 aaKnown RBP5.86□□□□□ -1.47
MSH5-213ENST00000468136 KMT2CQ8NEZ4 4911 aaKnown RBP5.85□□□□□ -1.47
MSH5-213ENST00000468136 LINC00313P59037 77 aa5.84□□□□□ -1.47
MSH5-213ENST00000468136 TRAV22A0A0B4J277 110 aa5.82□□□□□ -1.48
MSH5-213ENST00000468136 H7BZZ5 65 aa5.82□□□□□ -1.48
MSH5-213ENST00000468136 Q5VSD8 79 aa5.82□□□□□ -1.48
MSH5-213ENST00000468136 ZCCHC13Q8WW36 166 aaKnown RBP5.81□□□□□ -1.48
MSH5-213ENST00000468136 SNURFQ9Y675 71 aa5.81□□□□□ -1.48
MSH5-213ENST00000468136 H0Y9P7 68 aa5.8□□□□□ -1.48
MSH5-213ENST00000468136 FAM236DA0A1B0GTK5 79 aa5.79□□□□□ -1.48
MSH5-213ENST00000468136 NDUFS5O43920 106 aa5.79□□□□□ -1.48
MSH5-213ENST00000468136 FAM236CP0DP71 79 aa5.79□□□□□ -1.48
MSH5-213ENST00000468136 RPS28P62857 69 aaKnown RBP5.79□□□□□ -1.48
MSH5-213ENST00000468136 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
MSH5-213ENST00000468136 Q8N1X5 172 aa5.78□□□□□ -1.48
MSH5-213ENST00000468136 CYSTM1Q9H1C7 97 aa5.77□□□□□ -1.49
MSH5-213ENST00000468136 KRTAP10-8P60410 259 aa5.76□□□□□ -1.49
MSH5-213ENST00000468136 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
MSH5-213ENST00000468136 LINC00208Q96KT6 92 aa5.76□□□□□ -1.49
MSH5-213ENST00000468136 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
MSH5-213ENST00000468136 NOTCH2NLQ7Z3S9 236 aa5.75□□□□□ -1.49
MSH5-213ENST00000468136 SPANXA2-OT1Q8N9U9 137 aa5.75□□□□□ -1.49
MSH5-213ENST00000468136 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
MSH5-213ENST00000468136 FAT1Q14517 4588 aa5.74□□□□□ -1.49
MSH5-213ENST00000468136 FP248Q71RG6 208 aaPredicted RBP5.73□□□□□ -1.49
MSH5-213ENST00000468136 KRTAP16-1A8MUX0 517 aa5.72□□□□□ -1.49
MSH5-213ENST00000468136 SERP1Q9Y6X1 66 aa5.72□□□□□ -1.49
MSH5-213ENST00000468136 OXTP01178 125 aa5.71□□□□□ -1.5
MSH5-213ENST00000468136 CYP4F30PQ9H0H9 118 aa5.7□□□□□ -1.5
MSH5-213ENST00000468136 HSPG2P98160 4391 aa5.69□□□□□ -1.5
MSH5-213ENST00000468136 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
MSH5-213ENST00000468136 RYR1P21817 5038 aa5.68□□□□□ -1.5
MSH5-213ENST00000468136 RYR3Q15413 4870 aa5.68□□□□□ -1.5
MSH5-213ENST00000468136 IGLV7-46A0A075B6I9 117 aa5.65□□□□□ -1.5
MSH5-213ENST00000468136 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
MSH5-213ENST00000468136 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.5
MSH5-213ENST00000468136 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.5
MSH5-213ENST00000468136 A8MUU9 505 aa5.64□□□□□ -1.51
MSH5-213ENST00000468136 Q5W150 140 aa5.63□□□□□ -1.51
MSH5-213ENST00000468136 FLG2Q5D862 2391 aaPredicted RBP5.63□□□□□ -1.51
MSH5-213ENST00000468136 IGKV2-30P06310 120 aa5.62□□□□□ -1.51
MSH5-213ENST00000468136 Q75L30 129 aa5.61□□□□□ -1.51
MSH5-213ENST00000468136 SMIM26A0A096LP01 95 aa5.6□□□□□ -1.51
MSH5-213ENST00000468136 MT1HL1P0DM35 61 aa5.59□□□□□ -1.51
MSH5-213ENST00000468136 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
MSH5-213ENST00000468136 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
MSH5-213ENST00000468136 TNXBP22105 4242 aa5.58□□□□□ -1.52
MSH5-213ENST00000468136 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
MSH5-213ENST00000468136 C9orf92A6NGG3 77 aa5.55□□□□□ -1.52
MSH5-213ENST00000468136 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
MSH5-213ENST00000468136 DMBT1Q9UGM3 2413 aaPredicted RBP5.54□□□□□ -1.52
MSH5-213ENST00000468136 ACYP2P14621 99 aa5.53□□□□□ -1.52
MSH5-213ENST00000468136 FAT3Q8TDW7 4589 aa5.53□□□□□ -1.52
MSH5-213ENST00000468136 IGKV2D-30A0A075B6S6 120 aa5.52□□□□□ -1.53
MSH5-213ENST00000468136 A8MUN3 132 aa5.52□□□□□ -1.53
MSH5-213ENST00000468136 HRES1P13985 223 aa5.52□□□□□ -1.53
MSH5-213ENST00000468136 V9GYY9 64 aa5.52□□□□□ -1.53
MSH5-213ENST00000468136 KIAA1109Q2LD37 5005 aa5.51□□□□□ -1.53
MSH5-213ENST00000468136 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
MSH5-213ENST00000468136 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
MSH5-213ENST00000468136 RPL37P61927 97 aaKnown RBP5.5□□□□□ -1.53
MSH5-213ENST00000468136 PRR4Q16378 134 aa5.5□□□□□ -1.53
MSH5-213ENST00000468136 TPRXLQ17RH7 258 aa5.5□□□□□ -1.53
MSH5-213ENST00000468136 XP32Q5T750 250 aa5.49□□□□□ -1.53
MSH5-213ENST00000468136 COA5Q86WW8 74 aa5.48□□□□□ -1.53
MSH5-213ENST00000468136 LRP1Q07954 4544 aaKnown RBP5.48□□□□□ -1.53
MSH5-213ENST00000468136 EPPK1P58107 5090 aaKnown RBP5.46□□□□□ -1.54
MSH5-213ENST00000468136 Q1T7F1 81 aa5.45□□□□□ -1.54
MSH5-213ENST00000468136 SPINK7P58062 85 aa5.44□□□□□ -1.54
MSH5-213ENST00000468136 CHKB-CPT1BH3BT56 60 aa5.42□□□□□ -1.54
MSH5-213ENST00000468136 KRTAP4-5Q9BYR2 181 aa5.42□□□□□ -1.54
MSH5-213ENST00000468136 SPTSSBQ8NFR3 76 aa5.39□□□□□ -1.55
MSH5-213ENST00000468136 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
MSH5-213ENST00000468136 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
MSH5-213ENST00000468136 MPLKIPQ8TAP9 179 aa5.36□□□□□ -1.55
MSH5-213ENST00000468136 MYCBP2O75592 4640 aa5.36□□□□□ -1.55
MSH5-213ENST00000468136 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
MSH5-213ENST00000468136 SEC61BP60468 96 aaKnown RBP5.34□□□□□ -1.55
MSH5-213ENST00000468136 C4orf26Q17RF5 130 aa5.34□□□□□ -1.55
MSH5-213ENST00000468136 HERC2O95714 4834 aa5.32□□□□□ -1.56
MSH5-213ENST00000468136 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms