RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 A0A087WSZ3 146 aa2.64□□□□□ -1.99
CXXC4-202ENST00000466963 LCE1AQ5T7P2 110 aa2.64□□□□□ -1.99
CXXC4-202ENST00000466963 MUSTN1Q8IVN3 82 aa2.64□□□□□ -1.99
CXXC4-202ENST00000466963 NPC2P61916 151 aa2.63□□□□□ -1.99
CXXC4-202ENST00000466963 KRTAP15-1Q3LI76 137 aa2.63□□□□□ -1.99
CXXC4-202ENST00000466963 PAM16Q9Y3D7 125 aa2.63□□□□□ -1.99
CXXC4-202ENST00000466963 A0A1W2PNM2 257 aa2.62□□□□□ -1.99
CXXC4-202ENST00000466963 C2orf91Q6ZV80 131 aa2.62□□□□□ -1.99
CXXC4-202ENST00000466963 PRR15Q8IV56 129 aa2.62□□□□□ -1.99
CXXC4-202ENST00000466963 PRO2289Q9P1D8 64 aa2.62□□□□□ -1.99
CXXC4-202ENST00000466963 IGKV3D-7A0A0C4DH55 119 aa2.62□□□□□ -1.99
CXXC4-202ENST00000466963 ANKRD29Q8N6D5 301 aa2.62□□□□□ -1.99
CXXC4-202ENST00000466963 NAA38Q9BRA0 125 aaKnown RBP2.62□□□□□ -1.99
CXXC4-202ENST00000466963 TMEM256-PLSCR3K7ERE1 68 aa2.62□□□□□ -1.99
CXXC4-202ENST00000466963 PDE6GP18545 87 aa2.61□□□□□ -1.99
CXXC4-202ENST00000466963 UBE2V1Q13404 147 aa2.61□□□□□ -1.99
CXXC4-202ENST00000466963 COA6Q5JTJ3 125 aaKnown RBP2.61□□□□□ -1.99
CXXC4-202ENST00000466963 A0A0B4J2C4 111 aa2.6□□□□□ -1.99
CXXC4-202ENST00000466963 H0Y8G0 127 aa2.6□□□□□ -1.99
CXXC4-202ENST00000466963 H3BMG7 143 aa2.6□□□□□ -1.99
CXXC4-202ENST00000466963 TRACP01848 142 aa2.6□□□□□ -1.99
CXXC4-202ENST00000466963 TMEM254Q8TBM7 123 aa2.6□□□□□ -1.99
CXXC4-202ENST00000466963 HSBP1L1C9JCN9 74 aa2.59□□□□□ -1.99
CXXC4-202ENST00000466963 DLEU1O43261 78 aa2.59□□□□□ -1.99
CXXC4-202ENST00000466963 hCG_2014768A0A024R1R8 64 aa2.58□□□□□ -2
CXXC4-202ENST00000466963 KRTAP12-2P59991 146 aa2.58□□□□□ -2
CXXC4-202ENST00000466963 IGHV6-1A0A0B4J1U7 121 aa2.57□□□□□ -2
CXXC4-202ENST00000466963 C7orf65Q6ZTY9 151 aa2.57□□□□□ -2
CXXC4-202ENST00000466963 ORMDL1Q9P0S3 153 aa2.57□□□□□ -2
CXXC4-202ENST00000466963 MT1BP07438 61 aa2.57□□□□□ -2
CXXC4-202ENST00000466963 CSAG1Q6PB30 78 aa2.57□□□□□ -2
CXXC4-202ENST00000466963 APOC3P02656 99 aa2.57□□□□□ -2
CXXC4-202ENST00000466963 H3BUT2 72 aa2.56□□□□□ -2
CXXC4-202ENST00000466963 DNAL4O96015 105 aa2.56□□□□□ -2
CXXC4-202ENST00000466963 HIGD1BQ9P298 99 aa2.56□□□□□ -2
CXXC4-202ENST00000466963 KLKP1Q107X0 134 aa2.56□□□□□ -2
CXXC4-202ENST00000466963 SPRR2EP22531 72 aa2.55□□□□□ -2
CXXC4-202ENST00000466963 SPRR2BP35325 72 aa2.55□□□□□ -2
CXXC4-202ENST00000466963 SPRR2AP35326 72 aa2.55□□□□□ -2
CXXC4-202ENST00000466963 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
CXXC4-202ENST00000466963 COX6CP09669 75 aa2.55□□□□□ -2
CXXC4-202ENST00000466963 C8orf17Q9NRJ1 99 aa2.55□□□□□ -2
CXXC4-202ENST00000466963 H0YAA0 97 aa2.54□□□□□ -2
CXXC4-202ENST00000466963 PMCHL2Q9BQD1 86 aa2.54□□□□□ -2
CXXC4-202ENST00000466963 LYRM7Q5U5X0 104 aa2.54□□□□□ -2
CXXC4-202ENST00000466963 FAM236AA0A1B0GUQ0 79 aa2.53□□□□□ -2
CXXC4-202ENST00000466963 FAM236BA0A1B0GV22 79 aa2.53□□□□□ -2
CXXC4-202ENST00000466963 IMUPQ9GZP8 106 aa2.53□□□□□ -2
CXXC4-202ENST00000466963 CCKP06307 115 aa2.53□□□□□ -2
CXXC4-202ENST00000466963 FABP2P12104 132 aa2.53□□□□□ -2.01
CXXC4-202ENST00000466963 Q6ZVQ6 151 aa2.53□□□□□ -2.01
CXXC4-202ENST00000466963 MRPL34Q9BQ48 92 aaKnown RBP2.53□□□□□ -2.01
CXXC4-202ENST00000466963 JMJD7-PLA2G4BH0Y9G9 81 aa2.52□□□□□ -2.01
CXXC4-202ENST00000466963 CXCL6P80162 114 aa2.52□□□□□ -2.01
CXXC4-202ENST00000466963 RBM3P98179 157 aaKnown RBP2.51□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H4GQ99525 98 aa2.51□□□□□ -2.01
CXXC4-202ENST00000466963 SPRR2DP22532 72 aa2.5□□□□□ -2.01
CXXC4-202ENST00000466963 S4R3F8 94 aa2.5□□□□□ -2.01
CXXC4-202ENST00000466963 HIST3H2BBQ8N257 126 aa2.5□□□□□ -2.01
CXXC4-202ENST00000466963 PRO1854Q9UHT4 67 aa2.5□□□□□ -2.01
CXXC4-202ENST00000466963 LOC110117498A0A087WWA1 95 aa2.49□□□□□ -2.01
CXXC4-202ENST00000466963 KRTDAPP60985 99 aa2.49□□□□□ -2.01
CXXC4-202ENST00000466963 Q6ZQT0 140 aa2.49□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BLQ99880 126 aa2.49□□□□□ -2.01
CXXC4-202ENST00000466963 C9JAW5 83 aa2.49□□□□□ -2.01
CXXC4-202ENST00000466963 TRIAP1O43715 76 aa2.49□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BKO60814 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BJP06899 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BOP23527 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BBP33778 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BDP58876 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BCP62807 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST2H2BEQ16778 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BHQ93079 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 SPRR2FQ96RM1 72 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BNQ99877 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 HIST1H2BMQ99879 126 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 COX8AP10176 69 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
CXXC4-202ENST00000466963 C20orf197Q8N268 126 aa2.47□□□□□ -2.01
CXXC4-202ENST00000466963 hDV103S1A0JD37 113 aa2.45□□□□□ -2.02
CXXC4-202ENST00000466963 TTTY13Q9BZ97 58 aa2.45□□□□□ -2.02
CXXC4-202ENST00000466963 PLAC4Q8WY50 150 aa2.44□□□□□ -2.02
CXXC4-202ENST00000466963 TP53AIP1Q9HCN2 124 aa2.44□□□□□ -2.02
CXXC4-202ENST00000466963 MMP24-AS1A0A0U1RRL7 71 aa2.44□□□□□ -2.02
CXXC4-202ENST00000466963 CEND1Q8N111 149 aa2.43□□□□□ -2.02
CXXC4-202ENST00000466963 VAMP8Q9BV40 100 aa2.43□□□□□ -2.02
CXXC4-202ENST00000466963 NREPQ16612 68 aa2.42□□□□□ -2.02
CXXC4-202ENST00000466963 S100A2P29034 98 aa2.41□□□□□ -2.02
CXXC4-202ENST00000466963 LCA10Q71F78 164 aa2.41□□□□□ -2.02
CXXC4-202ENST00000466963 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
CXXC4-202ENST00000466963 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
CXXC4-202ENST00000466963 A8MUN3 132 aa2.41□□□□□ -2.02
CXXC4-202ENST00000466963 IGKV2-30P06310 120 aa2.4□□□□□ -2.03
CXXC4-202ENST00000466963 PSMB2P49721 201 aa2.39□□□□□ -2.03
CXXC4-202ENST00000466963 HSD52Q0P140 79 aa2.39□□□□□ -2.03
CXXC4-202ENST00000466963 C1orf64Q8NEQ6 169 aa2.39□□□□□ -2.03
CXXC4-202ENST00000466963 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
CXXC4-202ENST00000466963 IGKV2D-30A0A075B6S6 120 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms