RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 LRCOL1A6NCL2 159 aa2.57□□□□□ -2
CLCA3P-202ENST00000466454 C14orf177Q52M58 125 aa2.57□□□□□ -2
CLCA3P-202ENST00000466454 GCN1Q92616 2671 aaKnown RBP2.57□□□□□ -2
CLCA3P-202ENST00000466454 OTOGQ6ZRI0 2925 aa2.57□□□□□ -2
CLCA3P-202ENST00000466454 LYSTQ99698 3801 aa2.56□□□□□ -2
CLCA3P-202ENST00000466454 C2CD3Q4AC94 2353 aa2.56□□□□□ -2
CLCA3P-202ENST00000466454 UNC79Q9P2D8 2635 aa2.56□□□□□ -2
CLCA3P-202ENST00000466454 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
CLCA3P-202ENST00000466454 DEFB105AQ8NG35 78 aa2.56□□□□□ -2
CLCA3P-202ENST00000466454 NSD1Q96L73 2696 aaPredicted RBP2.56□□□□□ -2
CLCA3P-202ENST00000466454 IGKV2-30P06310 120 aa2.55□□□□□ -2
CLCA3P-202ENST00000466454 PRR15LQ9BU68 103 aa2.55□□□□□ -2
CLCA3P-202ENST00000466454 TP53AIP1Q9HCN2 124 aa2.55□□□□□ -2
CLCA3P-202ENST00000466454 PLAC8Q9NZF1 115 aa2.55□□□□□ -2
CLCA3P-202ENST00000466454 FAM208BQ5VWN6 2430 aa2.55□□□□□ -2
CLCA3P-202ENST00000466454 A0A096LNI7 61 aa2.55□□□□□ -2
CLCA3P-202ENST00000466454 A0A1W2PNN7 141 aa2.55□□□□□ -2
CLCA3P-202ENST00000466454 Q96NJ1 140 aa2.55□□□□□ -2
CLCA3P-202ENST00000466454 TENM1Q9UKZ4 2725 aa2.54□□□□□ -2
CLCA3P-202ENST00000466454 R4GN34 69 aa2.54□□□□□ -2
CLCA3P-202ENST00000466454 MMP24-AS1A0A0U1RRL7 71 aa2.54□□□□□ -2
CLCA3P-202ENST00000466454 DNAH6Q9C0G6 4158 aa2.54□□□□□ -2
CLCA3P-202ENST00000466454 ITPR2Q14571 2701 aa2.54□□□□□ -2
CLCA3P-202ENST00000466454 DNAH9Q9NYC9 4486 aa2.54□□□□□ -2
CLCA3P-202ENST00000466454 APLNQ9ULZ1 77 aa2.54□□□□□ -2
CLCA3P-202ENST00000466454 NBEAL2Q6ZNJ1 2754 aa2.53□□□□□ -2
CLCA3P-202ENST00000466454 DNAH10Q8IVF4 4471 aa2.53□□□□□ -2
CLCA3P-202ENST00000466454 HIVEP2P31629 2446 aa2.53□□□□□ -2
CLCA3P-202ENST00000466454 Q6ZRN7 208 aaPredicted RBP2.53□□□□□ -2
CLCA3P-202ENST00000466454 TEP1Q99973 2627 aaKnown RBP2.53□□□□□ -2.01
CLCA3P-202ENST00000466454 SONP18583 2426 aaKnown RBP2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 NUPR2A6NF83 97 aa2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 KRTAP4-5Q9BYR2 181 aa2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 PRKDCP78527 4128 aaKnown RBP2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 ALMS1Q8TCU4 4167 aa2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 ZFYVE26Q68DK2 2539 aa2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 KRTAP11-1Q8IUC1 163 aa2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 KRTAP1-5Q9BYS1 174 aa2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 H0Y9P7 68 aa2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 DNAH7Q8WXX0 4024 aa2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 VPS13DQ5THJ4 4388 aa2.52□□□□□ -2.01
CLCA3P-202ENST00000466454 DNAH17Q9UFH2 4485 aa2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 K7EIL1 84 aa2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 FN1P02751 2386 aaKnown RBP2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 CCDC168Q8NDH2 2452 aa2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 KRTAP13-3Q3SY46 172 aa2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 NOTCH2Q04721 2471 aa2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 SPACA4Q8TDM5 124 aa2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 LINC01558Q9Y6Z2 57 aa2.51□□□□□ -2.01
CLCA3P-202ENST00000466454 SPAG11AQ6PDA7 123 aa2.5□□□□□ -2.01
CLCA3P-202ENST00000466454 HECTD4Q9Y4D8 3996 aa2.5□□□□□ -2.01
CLCA3P-202ENST00000466454 PRLHP81277 87 aa2.5□□□□□ -2.01
CLCA3P-202ENST00000466454 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
CLCA3P-202ENST00000466454 DMAC1Q96GE9 116 aa2.49□□□□□ -2.01
CLCA3P-202ENST00000466454 DNAH8Q96JB1 4490 aa2.49□□□□□ -2.01
CLCA3P-202ENST00000466454 ACANP16112 2415 aa2.49□□□□□ -2.01
CLCA3P-202ENST00000466454 TENM3Q9P273 2699 aa2.48□□□□□ -2.01
CLCA3P-202ENST00000466454 A0A087WTM6 91 aa2.48□□□□□ -2.01
CLCA3P-202ENST00000466454 SPINK7P58062 85 aa2.48□□□□□ -2.01
CLCA3P-202ENST00000466454 WFDC13Q8IUB5 93 aa2.48□□□□□ -2.01
CLCA3P-202ENST00000466454 TENM2Q9NT68 2774 aa2.48□□□□□ -2.01
CLCA3P-202ENST00000466454 NBDYA0A0U1RRE5 68 aa2.48□□□□□ -2.01
CLCA3P-202ENST00000466454 PKD1L1Q8TDX9 2849 aa2.47□□□□□ -2.01
CLCA3P-202ENST00000466454 MTORP42345 2549 aa2.47□□□□□ -2.01
CLCA3P-202ENST00000466454 IGKV2D-30A0A075B6S6 120 aa2.47□□□□□ -2.01
CLCA3P-202ENST00000466454 COA5Q86WW8 74 aa2.47□□□□□ -2.01
CLCA3P-202ENST00000466454 DNAH2Q9P225 4427 aa2.47□□□□□ -2.01
CLCA3P-202ENST00000466454 IGKV2-24A0A0C4DH68 120 aa2.47□□□□□ -2.01
CLCA3P-202ENST00000466454 TPRXLQ17RH7 258 aa2.47□□□□□ -2.01
CLCA3P-202ENST00000466454 A0A0G2JQZ4 141 aa2.46□□□□□ -2.01
CLCA3P-202ENST00000466454 MRPL34Q9BQ48 92 aaKnown RBP2.46□□□□□ -2.01
CLCA3P-202ENST00000466454 MAST4O15021 2626 aa2.46□□□□□ -2.02
CLCA3P-202ENST00000466454 SETD2Q9BYW2 2564 aaPredicted RBP2.46□□□□□ -2.02
CLCA3P-202ENST00000466454 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
CLCA3P-202ENST00000466454 PLECQ15149 4684 aaKnown RBP2.46□□□□□ -2.02
CLCA3P-202ENST00000466454 BAHCC1Q9P281 2608 aa2.46□□□□□ -2.02
CLCA3P-202ENST00000466454 HELZ2Q9BYK8 2649 aaKnown RBP2.45□□□□□ -2.02
CLCA3P-202ENST00000466454 FASNP49327 2511 aaKnown RBP2.45□□□□□ -2.02
CLCA3P-202ENST00000466454 CSMD3Q7Z407 3707 aa2.44□□□□□ -2.02
CLCA3P-202ENST00000466454 SSBP3-AS1Q7Z2R9 100 aa2.44□□□□□ -2.02
CLCA3P-202ENST00000466454 HRES1P13985 223 aa2.44□□□□□ -2.02
CLCA3P-202ENST00000466454 PSORS1C2Q9UIG4 136 aa2.43□□□□□ -2.02
CLCA3P-202ENST00000466454 FBN1P35555 2871 aaKnown RBP2.43□□□□□ -2.02
CLCA3P-202ENST00000466454 KRTAP10-8P60410 259 aa2.43□□□□□ -2.02
CLCA3P-202ENST00000466454 ATRQ13535 2644 aa2.43□□□□□ -2.02
CLCA3P-202ENST00000466454 UBE2DNLQ8IWF7 75 aa2.42□□□□□ -2.02
CLCA3P-202ENST00000466454 LINC00304Q8N9R0 145 aa2.42□□□□□ -2.02
CLCA3P-202ENST00000466454 FRAS1Q86XX4 4008 aa2.41□□□□□ -2.02
CLCA3P-202ENST00000466454 ACYP2P14621 99 aa2.4□□□□□ -2.02
CLCA3P-202ENST00000466454 STARD9Q9P2P6 4700 aa2.4□□□□□ -2.03
CLCA3P-202ENST00000466454 DNAH11Q96DT5 4516 aa2.4□□□□□ -2.03
CLCA3P-202ENST00000466454 SACSQ9NZJ4 4579 aa2.4□□□□□ -2.03
CLCA3P-202ENST00000466454 COL7A1Q02388 2944 aa2.4□□□□□ -2.03
CLCA3P-202ENST00000466454 RPS29P62273 56 aaKnown RBP2.39□□□□□ -2.03
CLCA3P-202ENST00000466454 Q6ZSA8 131 aa2.39□□□□□ -2.03
CLCA3P-202ENST00000466454 SPINT4Q6UDR6 99 aa2.39□□□□□ -2.03
CLCA3P-202ENST00000466454 FBN3Q75N90 2809 aa2.39□□□□□ -2.03
CLCA3P-202ENST00000466454 HECTD1Q9ULT8 2610 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms