RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-206ENST00000466438 CCKP06307 115 aa8.08□□□□□ -1.12
HMGXB4-206ENST00000466438 ACYP1P07311 99 aa8.08□□□□□ -1.12
HMGXB4-206ENST00000466438 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
HMGXB4-206ENST00000466438 Q8NBF4 154 aa8.07□□□□□ -1.12
HMGXB4-206ENST00000466438 IGLV9-49A0A0B4J1Y8 123 aa8.06□□□□□ -1.12
HMGXB4-206ENST00000466438 SPINK1P00995 79 aa8.06□□□□□ -1.12
HMGXB4-206ENST00000466438 PCOTHQ58A44 107 aa8.05□□□□□ -1.12
HMGXB4-206ENST00000466438 VPS25Q9BRG1 176 aa8.05□□□□□ -1.12
HMGXB4-206ENST00000466438 A0A1B0GW54 56 aa8.04□□□□□ -1.12
HMGXB4-206ENST00000466438 IGFL1Q6UW32 110 aa8.03□□□□□ -1.12
HMGXB4-206ENST00000466438 MOBPQ13875 183 aa8.02□□□□□ -1.13
HMGXB4-206ENST00000466438 COX6B2Q6YFQ2 88 aa8□□□□□ -1.13
HMGXB4-206ENST00000466438 Q6Q795 121 aa7.99□□□□□ -1.13
HMGXB4-206ENST00000466438 SSBP3-AS1Q7Z2R9 100 aa7.99□□□□□ -1.13
HMGXB4-206ENST00000466438 RPS29P62273 56 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-206ENST00000466438 UBL5Q9BZL1 73 aa7.98□□□□□ -1.13
HMGXB4-206ENST00000466438 A0A1W2PNM2 257 aa7.97□□□□□ -1.13
HMGXB4-206ENST00000466438 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.14
HMGXB4-206ENST00000466438 LINC00846Q9NV44 126 aa7.95□□□□□ -1.14
HMGXB4-206ENST00000466438 CD164Q04900 197 aa7.94□□□□□ -1.14
HMGXB4-206ENST00000466438 A0A0G2JQZ4 141 aa7.92□□□□□ -1.14
HMGXB4-206ENST00000466438 TRBV7-7A0A0K0K1E9 115 aa7.92□□□□□ -1.14
HMGXB4-206ENST00000466438 SS18L2Q9UHA2 77 aa7.92□□□□□ -1.14
HMGXB4-206ENST00000466438 A0A087WSZ3 146 aa7.91□□□□□ -1.14
HMGXB4-206ENST00000466438 NREPQ16612 68 aa7.91□□□□□ -1.14
HMGXB4-206ENST00000466438 ATP5EP2Q5VTU8 51 aa7.9□□□□□ -1.14
HMGXB4-206ENST00000466438 LINC00643Q86TS7 51 aa7.9□□□□□ -1.14
HMGXB4-206ENST00000466438 Q6ZVQ6 151 aa7.89□□□□□ -1.15
HMGXB4-206ENST00000466438 HRCT1Q6UXD1 115 aa7.88□□□□□ -1.15
HMGXB4-206ENST00000466438 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
HMGXB4-206ENST00000466438 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
HMGXB4-206ENST00000466438 CXCL6P80162 114 aa7.83□□□□□ -1.16
HMGXB4-206ENST00000466438 BPY2O14599 106 aa7.82□□□□□ -1.16
HMGXB4-206ENST00000466438 SIGMAR1Q99720 223 aa7.82□□□□□ -1.16
HMGXB4-206ENST00000466438 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
HMGXB4-206ENST00000466438 Q5XG85 94 aa7.81□□□□□ -1.16
HMGXB4-206ENST00000466438 J3KT08 172 aa7.8□□□□□ -1.16
HMGXB4-206ENST00000466438 MT-ATP8P03928 68 aa7.79□□□□□ -1.16
HMGXB4-206ENST00000466438 IGKV3D-7A0A0C4DH55 119 aa7.78□□□□□ -1.16
HMGXB4-206ENST00000466438 IMUPQ9GZP8 106 aa7.78□□□□□ -1.16
HMGXB4-206ENST00000466438 KRTAP6-3Q3LI67 103 aa7.77□□□□□ -1.17
HMGXB4-206ENST00000466438 LINC00472Q9H8W2 130 aa7.76□□□□□ -1.17
HMGXB4-206ENST00000466438 IGKV4-1P06312 121 aa7.73□□□□□ -1.17
HMGXB4-206ENST00000466438 HIST1H4AP62805 103 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-206ENST00000466438 Q96NJ1 140 aa7.73□□□□□ -1.17
HMGXB4-206ENST00000466438 NEBP20929 6669 aa7.72□□□□□ -1.17
HMGXB4-206ENST00000466438 NDUFB1O75438 58 aa7.72□□□□□ -1.17
HMGXB4-206ENST00000466438 A8MWP4 228 aa7.71□□□□□ -1.18
HMGXB4-206ENST00000466438 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.18
HMGXB4-206ENST00000466438 DEFB116Q30KQ4 102 aa7.71□□□□□ -1.18
HMGXB4-206ENST00000466438 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
HMGXB4-206ENST00000466438 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
HMGXB4-206ENST00000466438 DSCR10P59022 87 aa7.7□□□□□ -1.18
HMGXB4-206ENST00000466438 K7EQZ3 153 aa7.68□□□□□ -1.18
HMGXB4-206ENST00000466438 C1orf195Q5TG92 126 aa7.68□□□□□ -1.18
HMGXB4-206ENST00000466438 PRR15Q8IV56 129 aa7.66□□□□□ -1.18
HMGXB4-206ENST00000466438 Q8N9L7 120 aa7.66□□□□□ -1.18
HMGXB4-206ENST00000466438 A0A1B0GVX0 72 aa7.65□□□□□ -1.18
HMGXB4-206ENST00000466438 MT2AP02795 61 aa7.65□□□□□ -1.18
HMGXB4-206ENST00000466438 SCGB1A1P11684 91 aa7.65□□□□□ -1.18
HMGXB4-206ENST00000466438 A0A087WVE0 104 aa7.64□□□□□ -1.19
HMGXB4-206ENST00000466438 KRTAP19-6Q3LI70 58 aa7.63□□□□□ -1.19
HMGXB4-206ENST00000466438 FAM236AA0A1B0GUQ0 79 aa7.62□□□□□ -1.19
HMGXB4-206ENST00000466438 FAM236BA0A1B0GV22 79 aa7.62□□□□□ -1.19
HMGXB4-206ENST00000466438 IGHV6-1A0A0B4J1U7 121 aa7.61□□□□□ -1.19
HMGXB4-206ENST00000466438 HCG22E2RYF7 251 aa7.61□□□□□ -1.19
HMGXB4-206ENST00000466438 C8orf87E5RJ46 101 aa7.61□□□□□ -1.19
HMGXB4-206ENST00000466438 KRTAP4-12Q9BQ66 201 aa7.61□□□□□ -1.19
HMGXB4-206ENST00000466438 KRTAP9-3Q9BYQ3 159 aa7.61□□□□□ -1.19
HMGXB4-206ENST00000466438 MT1FP04733 61 aa7.59□□□□□ -1.19
HMGXB4-206ENST00000466438 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
HMGXB4-206ENST00000466438 CASC2Q6XLA1 102 aa7.57□□□□□ -1.2
HMGXB4-206ENST00000466438 MMP24-AS1A0A0U1RRL7 71 aa7.56□□□□□ -1.2
HMGXB4-206ENST00000466438 ATOX1O00244 68 aa7.56□□□□□ -1.2
HMGXB4-206ENST00000466438 KRTAP20-1Q3LI63 56 aa7.56□□□□□ -1.2
HMGXB4-206ENST00000466438 hDV103S1A0JD37 113 aa7.55□□□□□ -1.2
HMGXB4-206ENST00000466438 WFDC13Q8IUB5 93 aa7.55□□□□□ -1.2
HMGXB4-206ENST00000466438 LINC00313P59037 77 aa7.54□□□□□ -1.2
HMGXB4-206ENST00000466438 SMIM20Q8N5G0 67 aa7.53□□□□□ -1.2
HMGXB4-206ENST00000466438 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
HMGXB4-206ENST00000466438 KRTAP10-10P60014 251 aa7.52□□□□□ -1.21
HMGXB4-206ENST00000466438 MRPL34Q9BQ48 92 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-206ENST00000466438 ANAPC13Q9BS18 74 aa7.48□□□□□ -1.21
HMGXB4-206ENST00000466438 MUC12Q9UKN1 5478 aa7.48□□□□□ -1.21
HMGXB4-206ENST00000466438 NOTCH2NLQ7Z3S9 236 aa7.46□□□□□ -1.22
HMGXB4-206ENST00000466438 NDUFS5O43920 106 aa7.45□□□□□ -1.22
HMGXB4-206ENST00000466438 TP53AIP1Q9HCN2 124 aa7.45□□□□□ -1.22
HMGXB4-206ENST00000466438 TRAV7A0A075B6U4 112 aa7.44□□□□□ -1.22
HMGXB4-206ENST00000466438 KRTAP23-1A1A580 65 aa7.44□□□□□ -1.22
HMGXB4-206ENST00000466438 ATP11AUNQ6ZP68 121 aa7.43□□□□□ -1.22
HMGXB4-206ENST00000466438 SERP2Q8N6R1 65 aa7.43□□□□□ -1.22
HMGXB4-206ENST00000466438 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
HMGXB4-206ENST00000466438 KRTAP3-1Q9BYR8 98 aa7.42□□□□□ -1.22
HMGXB4-206ENST00000466438 OCR1Q9BZK8 76 aa7.42□□□□□ -1.22
HMGXB4-206ENST00000466438 UQCRQO14949 82 aa7.41□□□□□ -1.22
HMGXB4-206ENST00000466438 Q8N9P0 234 aaPredicted RBP7.41□□□□□ -1.22
HMGXB4-206ENST00000466438 LCE3BQ5TA77 95 aa7.4□□□□□ -1.22
HMGXB4-206ENST00000466438 COX7CP15954 63 aa7.38□□□□□ -1.23
HMGXB4-206ENST00000466438 Q75L30 129 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms