RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 SERF1AO75920 110 aa2.52□□□□□ -2.01
NCL-208ENST00000466274 C3orf79P0CE67 100 aa2.52□□□□□ -2.01
NCL-208ENST00000466274 LINC00308Q8TCZ7 52 aa2.52□□□□□ -2.01
NCL-208ENST00000466274 SIGMAR1Q99720 223 aa2.52□□□□□ -2.01
NCL-208ENST00000466274 SEC11CQ9BY50 192 aa2.52□□□□□ -2.01
NCL-208ENST00000466274 PRO2289Q9P1D8 64 aa2.52□□□□□ -2.01
NCL-208ENST00000466274 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
NCL-208ENST00000466274 H0Y8G0 127 aa2.5□□□□□ -2.01
NCL-208ENST00000466274 HERVK_113P61574 105 aa2.5□□□□□ -2.01
NCL-208ENST00000466274 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
NCL-208ENST00000466274 ZCCHC13Q8WW36 166 aaKnown RBP2.5□□□□□ -2.01
NCL-208ENST00000466274 TTTY13Q9BZ97 58 aa2.5□□□□□ -2.01
NCL-208ENST00000466274 TMEM218A2RU14 115 aa2.49□□□□□ -2.01
NCL-208ENST00000466274 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
NCL-208ENST00000466274 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
NCL-208ENST00000466274 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
NCL-208ENST00000466274 E9PLD3 99 aa2.48□□□□□ -2.01
NCL-208ENST00000466274 VAMP3Q15836 100 aa2.48□□□□□ -2.01
NCL-208ENST00000466274 COX19Q49B96 90 aa2.48□□□□□ -2.01
NCL-208ENST00000466274 TEN1Q86WV5 123 aa2.48□□□□□ -2.01
NCL-208ENST00000466274 YPEL4Q96NS1 127 aa2.48□□□□□ -2.01
NCL-208ENST00000466274 DSCR8Q96T75 97 aa2.48□□□□□ -2.01
NCL-208ENST00000466274 SNHG12Q9BXW3 62 aa2.48□□□□□ -2.01
NCL-208ENST00000466274 TRAPPC1Q9Y5R8 145 aa2.48□□□□□ -2.01
NCL-208ENST00000466274 A0A087WSZ3 146 aa2.47□□□□□ -2.01
NCL-208ENST00000466274 IGKV4-1P06312 121 aa2.47□□□□□ -2.01
NCL-208ENST00000466274 S100PP25815 95 aa2.47□□□□□ -2.01
NCL-208ENST00000466274 CHCHD1Q96BP2 118 aaKnown RBP2.47□□□□□ -2.01
NCL-208ENST00000466274 A6NDN8 102 aa2.46□□□□□ -2.02
NCL-208ENST00000466274 H3BUT2 72 aa2.46□□□□□ -2.02
NCL-208ENST00000466274 DPM2O94777 84 aa2.46□□□□□ -2.02
NCL-208ENST00000466274 PLNP26678 52 aa2.46□□□□□ -2.02
NCL-208ENST00000466274 LYRM7Q5U5X0 104 aa2.46□□□□□ -2.02
NCL-208ENST00000466274 CEND1Q8N111 149 aa2.46□□□□□ -2.02
NCL-208ENST00000466274 PPDPFLQ8WWR9 84 aa2.46□□□□□ -2.02
NCL-208ENST00000466274 IGHV6-1A0A0B4J1U7 121 aa2.45□□□□□ -2.02
NCL-208ENST00000466274 hADV29S1A0JD25 119 aa2.45□□□□□ -2.02
NCL-208ENST00000466274 TIMM17BO60830 172 aa2.45□□□□□ -2.02
NCL-208ENST00000466274 IGKCP01834 107 aa2.45□□□□□ -2.02
NCL-208ENST00000466274 Q6ZQY7 126 aa2.45□□□□□ -2.02
NCL-208ENST00000466274 SMIM11BQ8TCY0 68 aa2.45□□□□□ -2.02
NCL-208ENST00000466274 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
NCL-208ENST00000466274 C8orf87E5RJ46 101 aa2.44□□□□□ -2.02
NCL-208ENST00000466274 CLLU1Q5K131 121 aa2.44□□□□□ -2.02
NCL-208ENST00000466274 KLKP1Q107X0 134 aa2.43□□□□□ -2.02
NCL-208ENST00000466274 LINC00575Q6W349 94 aa2.43□□□□□ -2.02
NCL-208ENST00000466274 PRR15Q8IV56 129 aa2.43□□□□□ -2.02
NCL-208ENST00000466274 HSBP1O75506 76 aa2.42□□□□□ -2.02
NCL-208ENST00000466274 LEPROTL1O95214 131 aa2.42□□□□□ -2.02
NCL-208ENST00000466274 FABP4P15090 132 aa2.42□□□□□ -2.02
NCL-208ENST00000466274 C5orf47Q569G3 176 aa2.42□□□□□ -2.02
NCL-208ENST00000466274 UQCC3Q6UW78 93 aa2.42□□□□□ -2.02
NCL-208ENST00000466274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.42□□□□□ -2.02
NCL-208ENST00000466274 CRIPTQ9P021 101 aa2.42□□□□□ -2.02
NCL-208ENST00000466274 CSAG1Q6PB30 78 aa2.4□□□□□ -2.03
NCL-208ENST00000466274 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
NCL-208ENST00000466274 C12orf57Q99622 126 aa2.4□□□□□ -2.03
NCL-208ENST00000466274 IGKV3D-7A0A0C4DH55 119 aa2.39□□□□□ -2.03
NCL-208ENST00000466274 MT4P47944 62 aa2.39□□□□□ -2.03
NCL-208ENST00000466274 MUSTN1Q8IVN3 82 aa2.39□□□□□ -2.03
NCL-208ENST00000466274 HSPB8Q9UJY1 196 aa2.39□□□□□ -2.03
NCL-208ENST00000466274 TRGC2P03986 189 aa2.38□□□□□ -2.03
NCL-208ENST00000466274 IFITM1P13164 125 aa2.38□□□□□ -2.03
NCL-208ENST00000466274 RBM3P98179 157 aaKnown RBP2.38□□□□□ -2.03
NCL-208ENST00000466274 LCA10Q71F78 164 aa2.38□□□□□ -2.03
NCL-208ENST00000466274 A0A1B0GVX0 72 aa2.37□□□□□ -2.03
NCL-208ENST00000466274 SYS1-DBNDD2H3BUS1 97 aa2.37□□□□□ -2.03
NCL-208ENST00000466274 SNCGO76070 127 aa2.37□□□□□ -2.03
NCL-208ENST00000466274 MT1XP80297 61 aa2.37□□□□□ -2.03
NCL-208ENST00000466274 DEFB116Q30KQ4 102 aa2.37□□□□□ -2.03
NCL-208ENST00000466274 LINC01545Q5VT33 79 aa2.37□□□□□ -2.03
NCL-208ENST00000466274 LINC00472Q9H8W2 130 aa2.36□□□□□ -2.03
NCL-208ENST00000466274 H3BMG7 143 aa2.35□□□□□ -2.03
NCL-208ENST00000466274 APOC3P02656 99 aa2.35□□□□□ -2.03
NCL-208ENST00000466274 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
NCL-208ENST00000466274 TRBV7-4A0A0J9YYF1 115 aa2.34□□□□□ -2.03
NCL-208ENST00000466274 SCGB1D4Q6XE38 83 aa2.34□□□□□ -2.03
NCL-208ENST00000466274 S4R3F8 94 aa2.34□□□□□ -2.03
NCL-208ENST00000466274 SNAPINO95295 136 aa2.33□□□□□ -2.04
NCL-208ENST00000466274 BVES-AS1Q5T3Y7 98 aa2.33□□□□□ -2.04
NCL-208ENST00000466274 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
NCL-208ENST00000466274 NDUFB1O75438 58 aa2.32□□□□□ -2.04
NCL-208ENST00000466274 ATOH7Q8N100 152 aa2.32□□□□□ -2.04
NCL-208ENST00000466274 Q8N9L7 120 aa2.32□□□□□ -2.04
NCL-208ENST00000466274 J3KT08 172 aa2.31□□□□□ -2.04
NCL-208ENST00000466274 PDE6GP18545 87 aa2.31□□□□□ -2.04
NCL-208ENST00000466274 C2orf91Q6ZV80 131 aa2.31□□□□□ -2.04
NCL-208ENST00000466274 ANKRD29Q8N6D5 301 aa2.31□□□□□ -2.04
NCL-208ENST00000466274 TRACP01848 142 aa2.3□□□□□ -2.04
NCL-208ENST00000466274 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
NCL-208ENST00000466274 SVBPQ8N300 66 aa2.3□□□□□ -2.04
NCL-208ENST00000466274 A0A1B0GV72 72 aa2.29□□□□□ -2.04
NCL-208ENST00000466274 K7EQZ3 153 aa2.29□□□□□ -2.04
NCL-208ENST00000466274 FABP2P12104 132 aa2.29□□□□□ -2.04
NCL-208ENST00000466274 HIST1H2BKO60814 126 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 HIST1H2BJP06899 126 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 HIST1H2BOP23527 126 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 HIST1H2BBP33778 126 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 HIST1H2BDP58876 126 aa2.28□□□□□ -2.04
NCL-208ENST00000466274 HIST1H2BCP62807 126 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms