RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
USP39-212ENST00000465514 SNCGO76070 127 aa4.88□□□□□ -1.63
USP39-212ENST00000465514 H0YGX0 51 aa4.87□□□□□ -1.63
USP39-212ENST00000465514 FAM218AQ96MZ4 157 aa4.87□□□□□ -1.63
USP39-212ENST00000465514 KRTAP16-1A8MUX0 517 aa4.86□□□□□ -1.63
USP39-212ENST00000465514 H3BMG7 143 aa4.86□□□□□ -1.63
USP39-212ENST00000465514 M0R143 59 aa4.86□□□□□ -1.63
USP39-212ENST00000465514 CEND1Q8N111 149 aa4.86□□□□□ -1.63
USP39-212ENST00000465514 RAB37Q96AX2 223 aa4.86□□□□□ -1.63
USP39-212ENST00000465514 FAM236DA0A1B0GTK5 79 aa4.85□□□□□ -1.63
USP39-212ENST00000465514 FAM236CP0DP71 79 aa4.85□□□□□ -1.63
USP39-212ENST00000465514 FXYD2P54710 66 aa4.85□□□□□ -1.63
USP39-212ENST00000465514 SIGMAR1Q99720 223 aa4.85□□□□□ -1.63
USP39-212ENST00000465514 C9orf118A6NHY6 69 aa4.84□□□□□ -1.63
USP39-212ENST00000465514 FABP2P12104 132 aa4.84□□□□□ -1.63
USP39-212ENST00000465514 LINC00313P59037 77 aa4.84□□□□□ -1.63
USP39-212ENST00000465514 A0A1W2PNM2 257 aa4.83□□□□□ -1.64
USP39-212ENST00000465514 BATFQ16520 125 aa4.83□□□□□ -1.64
USP39-212ENST00000465514 A0A0B4J2C4 111 aa4.82□□□□□ -1.64
USP39-212ENST00000465514 IGKV4-1P06312 121 aa4.82□□□□□ -1.64
USP39-212ENST00000465514 A0A1B0GX51 115 aa4.81□□□□□ -1.64
USP39-212ENST00000465514 HRES1P13985 223 aa4.81□□□□□ -1.64
USP39-212ENST00000465514 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
USP39-212ENST00000465514 MPLKIPQ8TAP9 179 aa4.81□□□□□ -1.64
USP39-212ENST00000465514 RBM12B-AS1Q9P1G2 102 aa4.81□□□□□ -1.64
USP39-212ENST00000465514 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
USP39-212ENST00000465514 K7ERJ3 54 aa4.8□□□□□ -1.64
USP39-212ENST00000465514 DEFB116Q30KQ4 102 aa4.79□□□□□ -1.64
USP39-212ENST00000465514 ANKRD29Q8N6D5 301 aa4.79□□□□□ -1.64
USP39-212ENST00000465514 PRO1854Q9UHT4 67 aa4.79□□□□□ -1.64
USP39-212ENST00000465514 TRBV7-4A0A0J9YYF1 115 aa4.78□□□□□ -1.64
USP39-212ENST00000465514 A0A1B0GV72 72 aa4.78□□□□□ -1.64
USP39-212ENST00000465514 COL5A1-AS1Q5SY13 56 aa4.78□□□□□ -1.64
USP39-212ENST00000465514 IGHV6-1A0A0B4J1U7 121 aa4.77□□□□□ -1.65
USP39-212ENST00000465514 A0A1B0GV90 55 aa4.77□□□□□ -1.65
USP39-212ENST00000465514 TRIAP1O43715 76 aa4.77□□□□□ -1.65
USP39-212ENST00000465514 LINC00472Q9H8W2 130 aa4.77□□□□□ -1.65
USP39-212ENST00000465514 TAX1BP3O14907 124 aa4.76□□□□□ -1.65
USP39-212ENST00000465514 KMT2DO14686 5537 aa4.76□□□□□ -1.65
USP39-212ENST00000465514 ORMDL1Q9P0S3 153 aa4.75□□□□□ -1.65
USP39-212ENST00000465514 DNAL4O96015 105 aa4.74□□□□□ -1.65
USP39-212ENST00000465514 CCKP06307 115 aa4.74□□□□□ -1.65
USP39-212ENST00000465514 H3BQ85 93 aa4.73□□□□□ -1.65
USP39-212ENST00000465514 TRACP01848 142 aa4.73□□□□□ -1.65
USP39-212ENST00000465514 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
USP39-212ENST00000465514 NAA38Q9BRA0 125 aaKnown RBP4.73□□□□□ -1.65
USP39-212ENST00000465514 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
USP39-212ENST00000465514 TMEM256-PLSCR3K7ERE1 68 aa4.72□□□□□ -1.65
USP39-212ENST00000465514 MTURNQ8N3F0 131 aa4.72□□□□□ -1.65
USP39-212ENST00000465514 A0A1B0GVX0 72 aa4.71□□□□□ -1.66
USP39-212ENST00000465514 C8orf87E5RJ46 101 aa4.71□□□□□ -1.66
USP39-212ENST00000465514 PSMB2P49721 201 aa4.71□□□□□ -1.66
USP39-212ENST00000465514 A0A1W2PPM0 123 aa4.7□□□□□ -1.66
USP39-212ENST00000465514 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
USP39-212ENST00000465514 SPINK7P58062 85 aa4.69□□□□□ -1.66
USP39-212ENST00000465514 UBE2V1Q13404 147 aa4.69□□□□□ -1.66
USP39-212ENST00000465514 LYRM7Q5U5X0 104 aa4.69□□□□□ -1.66
USP39-212ENST00000465514 VPS25Q9BRG1 176 aa4.69□□□□□ -1.66
USP39-212ENST00000465514 COX6CP09669 75 aa4.68□□□□□ -1.66
USP39-212ENST00000465514 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
USP39-212ENST00000465514 SCGB1C2P0DMR2 95 aa4.66□□□□□ -1.66
USP39-212ENST00000465514 RBM3P98179 157 aaKnown RBP4.66□□□□□ -1.66
USP39-212ENST00000465514 Q8N9P0 234 aaPredicted RBP4.66□□□□□ -1.66
USP39-212ENST00000465514 SPCS1Q9Y6A9 102 aa4.66□□□□□ -1.66
USP39-212ENST00000465514 J3KT08 172 aa4.65□□□□□ -1.67
USP39-212ENST00000465514 K7EP34 96 aa4.65□□□□□ -1.67
USP39-212ENST00000465514 DSCR8Q96T75 97 aa4.65□□□□□ -1.67
USP39-212ENST00000465514 A8MWP4 228 aa4.64□□□□□ -1.67
USP39-212ENST00000465514 ATXN8Q156A1 80 aa4.64□□□□□ -1.67
USP39-212ENST00000465514 WFDC13Q8IUB5 93 aa4.63□□□□□ -1.67
USP39-212ENST00000465514 NDUFB1O75438 58 aa4.62□□□□□ -1.67
USP39-212ENST00000465514 C21orf62-AS1Q17RA5 79 aa4.62□□□□□ -1.67
USP39-212ENST00000465514 Q6ZQT0 140 aa4.62□□□□□ -1.67
USP39-212ENST00000465514 GTF2H5Q6ZYL4 71 aa4.62□□□□□ -1.67
USP39-212ENST00000465514 C9JAW5 83 aa4.61□□□□□ -1.67
USP39-212ENST00000465514 BAALC-AS2P0C853 105 aa4.61□□□□□ -1.67
USP39-212ENST00000465514 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
USP39-212ENST00000465514 C8orf17Q9NRJ1 99 aa4.6□□□□□ -1.67
USP39-212ENST00000465514 A6NN06 94 aa4.59□□□□□ -1.67
USP39-212ENST00000465514 PRO0461Q9UI25 63 aa4.59□□□□□ -1.67
USP39-212ENST00000465514 IGKV3D-7A0A0C4DH55 119 aa4.57□□□□□ -1.68
USP39-212ENST00000465514 H3BT86 120 aa4.57□□□□□ -1.68
USP39-212ENST00000465514 K7ERU9 68 aa4.56□□□□□ -1.68
USP39-212ENST00000465514 Q6ZVQ6 151 aa4.56□□□□□ -1.68
USP39-212ENST00000465514 F8W1H4 67 aa4.55□□□□□ -1.68
USP39-212ENST00000465514 H1FX-AS1Q4G0G2 97 aa4.55□□□□□ -1.68
USP39-212ENST00000465514 A0A1B0GW54 56 aa4.54□□□□□ -1.68
USP39-212ENST00000465514 PCP4P48539 62 aa4.54□□□□□ -1.68
USP39-212ENST00000465514 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
USP39-212ENST00000465514 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
USP39-212ENST00000465514 LOC110117498A0A087WWA1 95 aa4.53□□□□□ -1.68
USP39-212ENST00000465514 JMJD7-PLA2G4BH0Y9G9 81 aa4.53□□□□□ -1.68
USP39-212ENST00000465514 PRR15Q8IV56 129 aa4.53□□□□□ -1.68
USP39-212ENST00000465514 MMP24-AS1A0A0U1RRL7 71 aa4.51□□□□□ -1.69
USP39-212ENST00000465514 TMEM254Q8TBM7 123 aa4.51□□□□□ -1.69
USP39-212ENST00000465514 MRPL34Q9BQ48 92 aaKnown RBP4.51□□□□□ -1.69
USP39-212ENST00000465514 J3QR89 54 aa4.5□□□□□ -1.69
USP39-212ENST00000465514 PDE6GP18545 87 aa4.5□□□□□ -1.69
USP39-212ENST00000465514 NREPQ16612 68 aa4.5□□□□□ -1.69
USP39-212ENST00000465514 ETDBQ3ZM63 59 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms