RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 LRP2P98164 4655 aa6.85□□□□□ -1.31
APTX-213ENST00000465003 DNAL4O96015 105 aa6.85□□□□□ -1.31
APTX-213ENST00000465003 H0YGX0 51 aa6.84□□□□□ -1.32
APTX-213ENST00000465003 GHRHP01286 108 aa6.82□□□□□ -1.32
APTX-213ENST00000465003 A0A0U1RQV1 116 aa6.82□□□□□ -1.32
APTX-213ENST00000465003 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.82□□□□□ -1.32
APTX-213ENST00000465003 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
APTX-213ENST00000465003 BAALC-AS2P0C853 105 aa6.81□□□□□ -1.32
APTX-213ENST00000465003 PRR4Q16378 134 aa6.81□□□□□ -1.32
APTX-213ENST00000465003 CCKP06307 115 aa6.8□□□□□ -1.32
APTX-213ENST00000465003 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
APTX-213ENST00000465003 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
APTX-213ENST00000465003 OBSCN-AS1Q96MR7 158 aa6.8□□□□□ -1.32
APTX-213ENST00000465003 UBR4Q5T4S7 5183 aa6.78□□□□□ -1.32
APTX-213ENST00000465003 A0A087WVE0 104 aa6.77□□□□□ -1.33
APTX-213ENST00000465003 F8WEM9 126 aa6.77□□□□□ -1.33
APTX-213ENST00000465003 IGKV3D-7A0A0C4DH55 119 aa6.77□□□□□ -1.33
APTX-213ENST00000465003 SPINK1P00995 79 aa6.76□□□□□ -1.33
APTX-213ENST00000465003 SPAG11AQ6PDA7 123 aa6.76□□□□□ -1.33
APTX-213ENST00000465003 LINC00846Q9NV44 126 aa6.76□□□□□ -1.33
APTX-213ENST00000465003 RBM3P98179 157 aaKnown RBP6.75□□□□□ -1.33
APTX-213ENST00000465003 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
APTX-213ENST00000465003 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
APTX-213ENST00000465003 IGLV8-61A0A075B6I0 122 aa6.69□□□□□ -1.34
APTX-213ENST00000465003 IGLV7-46A0A075B6I9 117 aa6.69□□□□□ -1.34
APTX-213ENST00000465003 RPS29P62273 56 aaKnown RBP6.68□□□□□ -1.34
APTX-213ENST00000465003 C14orf132Q9NPU4 83 aa6.68□□□□□ -1.34
APTX-213ENST00000465003 JMJD7-PLA2G4BH0Y9G9 81 aa6.67□□□□□ -1.34
APTX-213ENST00000465003 TMEM256-PLSCR3K7ERE1 68 aa6.67□□□□□ -1.34
APTX-213ENST00000465003 LIMD2Q9BT23 127 aa6.66□□□□□ -1.34
APTX-213ENST00000465003 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
APTX-213ENST00000465003 UBL5Q9BZL1 73 aa6.66□□□□□ -1.34
APTX-213ENST00000465003 Q1T7F1 81 aa6.64□□□□□ -1.35
APTX-213ENST00000465003 TRBV7-4A0A0J9YYF1 115 aa6.64□□□□□ -1.35
APTX-213ENST00000465003 A0A1W2PNM2 257 aa6.63□□□□□ -1.35
APTX-213ENST00000465003 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
APTX-213ENST00000465003 A0A087WSZ3 146 aa6.62□□□□□ -1.35
APTX-213ENST00000465003 CXCL6P80162 114 aa6.6□□□□□ -1.35
APTX-213ENST00000465003 MPLKIPQ8TAP9 179 aa6.6□□□□□ -1.35
APTX-213ENST00000465003 C9orf92A6NGG3 77 aa6.6□□□□□ -1.35
APTX-213ENST00000465003 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
APTX-213ENST00000465003 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
APTX-213ENST00000465003 SNURFQ9Y675 71 aa6.6□□□□□ -1.35
APTX-213ENST00000465003 MUC2Q02817 5179 aa6.59□□□□□ -1.36
APTX-213ENST00000465003 H3BQ85 93 aa6.58□□□□□ -1.36
APTX-213ENST00000465003 NDUFS5O43920 106 aa6.58□□□□□ -1.36
APTX-213ENST00000465003 RBM12B-AS1Q9P1G2 102 aa6.58□□□□□ -1.36
APTX-213ENST00000465003 TMEM254Q8TBM7 123 aa6.57□□□□□ -1.36
APTX-213ENST00000465003 Q6ZVQ6 151 aa6.55□□□□□ -1.36
APTX-213ENST00000465003 DEFB116Q30KQ4 102 aa6.54□□□□□ -1.36
APTX-213ENST00000465003 hDV103S1A0JD37 113 aa6.53□□□□□ -1.36
APTX-213ENST00000465003 LOC110117498A0A087WWA1 95 aa6.53□□□□□ -1.36
APTX-213ENST00000465003 PDE6GP18545 87 aa6.53□□□□□ -1.36
APTX-213ENST00000465003 Q96NJ1 140 aa6.53□□□□□ -1.36
APTX-213ENST00000465003 NREPQ16612 68 aa6.52□□□□□ -1.37
APTX-213ENST00000465003 ASB16-AS1Q495Z4 193 aa6.52□□□□□ -1.37
APTX-213ENST00000465003 Q6ZQT0 140 aa6.52□□□□□ -1.37
APTX-213ENST00000465003 XP32Q5T750 250 aa6.51□□□□□ -1.37
APTX-213ENST00000465003 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
APTX-213ENST00000465003 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
APTX-213ENST00000465003 ATP11AUNQ6ZP68 121 aa6.47□□□□□ -1.37
APTX-213ENST00000465003 IGKV4-1P06312 121 aa6.46□□□□□ -1.37
APTX-213ENST00000465003 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
APTX-213ENST00000465003 BPY2O14599 106 aa6.45□□□□□ -1.38
APTX-213ENST00000465003 LINC00472Q9H8W2 130 aa6.45□□□□□ -1.38
APTX-213ENST00000465003 OCR1Q9BZK8 76 aa6.44□□□□□ -1.38
APTX-213ENST00000465003 CYP4F30PQ9H0H9 118 aa6.44□□□□□ -1.38
APTX-213ENST00000465003 MUC17Q685J3 4493 aa6.43□□□□□ -1.38
APTX-213ENST00000465003 DSCR10P59022 87 aa6.43□□□□□ -1.38
APTX-213ENST00000465003 C8orf87E5RJ46 101 aa6.42□□□□□ -1.38
APTX-213ENST00000465003 NOTCH2NLQ7Z3S9 236 aa6.42□□□□□ -1.38
APTX-213ENST00000465003 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
APTX-213ENST00000465003 LCA10Q71F78 164 aa6.4□□□□□ -1.38
APTX-213ENST00000465003 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
APTX-213ENST00000465003 IGHV6-1A0A0B4J1U7 121 aa6.4□□□□□ -1.39
APTX-213ENST00000465003 A6NN06 94 aa6.4□□□□□ -1.39
APTX-213ENST00000465003 PCOTHQ58A44 107 aa6.4□□□□□ -1.39
APTX-213ENST00000465003 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.39
APTX-213ENST00000465003 H3BS24 57 aa6.39□□□□□ -1.39
APTX-213ENST00000465003 Q5VV11 94 aa6.38□□□□□ -1.39
APTX-213ENST00000465003 PSPHP1O15172 72 aa6.37□□□□□ -1.39
APTX-213ENST00000465003 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
APTX-213ENST00000465003 RPL37P61927 97 aaKnown RBP6.36□□□□□ -1.39
APTX-213ENST00000465003 NDUFB1O75438 58 aa6.34□□□□□ -1.39
APTX-213ENST00000465003 LINC00313P59037 77 aa6.34□□□□□ -1.39
APTX-213ENST00000465003 ZCCHC13Q8WW36 166 aaKnown RBP6.34□□□□□ -1.39
APTX-213ENST00000465003 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
APTX-213ENST00000465003 A8MUN3 132 aa6.33□□□□□ -1.4
APTX-213ENST00000465003 A0A1B0GW54 56 aa6.33□□□□□ -1.4
APTX-213ENST00000465003 FAT4Q6V0I7 4981 aa6.33□□□□□ -1.4
APTX-213ENST00000465003 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
APTX-213ENST00000465003 Q75L30 129 aa6.32□□□□□ -1.4
APTX-213ENST00000465003 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
APTX-213ENST00000465003 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
APTX-213ENST00000465003 A8MWP4 228 aa6.3□□□□□ -1.4
APTX-213ENST00000465003 Q8N9L7 120 aa6.3□□□□□ -1.4
APTX-213ENST00000465003 CHKB-CPT1BH3BT56 60 aa6.29□□□□□ -1.4
APTX-213ENST00000465003 K7EQZ3 153 aa6.29□□□□□ -1.4
APTX-213ENST00000465003 LOC101927531A0A1B0GV80 90 aa6.29□□□□□ -1.4
APTX-213ENST00000465003 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms