RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CDK2AP2O75956 126 aa7.51□□□□□ -1.21
CLCNKA-204ENST00000464764 HECTD4Q9Y4D8 3996 aa7.51□□□□□ -1.21
CLCNKA-204ENST00000464764 PLAC8Q9NZF1 115 aa7.51□□□□□ -1.21
CLCNKA-204ENST00000464764 Q5W150 140 aa7.5□□□□□ -1.21
CLCNKA-204ENST00000464764 MRPL34Q9BQ48 92 aaKnown RBP7.5□□□□□ -1.21
CLCNKA-204ENST00000464764 RETNLBQ9BQ08 111 aa7.5□□□□□ -1.21
CLCNKA-204ENST00000464764 WWC2-AS2Q96NR7 200 aa7.49□□□□□ -1.21
CLCNKA-204ENST00000464764 DYNC2H1Q8NCM8 4307 aaKnown RBP7.46□□□□□ -1.21
CLCNKA-204ENST00000464764 NBDYA0A0U1RRE5 68 aa7.46□□□□□ -1.22
CLCNKA-204ENST00000464764 SPACA4Q8TDM5 124 aa7.46□□□□□ -1.22
CLCNKA-204ENST00000464764 PSORS1C2Q9UIG4 136 aa7.46□□□□□ -1.22
CLCNKA-204ENST00000464764 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.22
CLCNKA-204ENST00000464764 DNAH17Q9UFH2 4485 aa7.45□□□□□ -1.22
CLCNKA-204ENST00000464764 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
CLCNKA-204ENST00000464764 KMT2AQ03164 3969 aa7.45□□□□□ -1.22
CLCNKA-204ENST00000464764 PRAC1Q96KF2 57 aa7.45□□□□□ -1.22
CLCNKA-204ENST00000464764 TGP01266 2768 aa7.44□□□□□ -1.22
CLCNKA-204ENST00000464764 STARD9Q9P2P6 4700 aa7.43□□□□□ -1.22
CLCNKA-204ENST00000464764 MDFIQ99750 246 aa7.43□□□□□ -1.22
CLCNKA-204ENST00000464764 DNAH2Q9P225 4427 aa7.41□□□□□ -1.22
CLCNKA-204ENST00000464764 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.23
CLCNKA-204ENST00000464764 IGLV5-52A0A0A0MRZ9 124 aa7.39□□□□□ -1.23
CLCNKA-204ENST00000464764 CIRBP-AS1Q8TBR5 109 aa7.39□□□□□ -1.23
CLCNKA-204ENST00000464764 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
CLCNKA-204ENST00000464764 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
CLCNKA-204ENST00000464764 C7orf65Q6ZTY9 151 aa7.38□□□□□ -1.23
CLCNKA-204ENST00000464764 FBN3Q75N90 2809 aa7.37□□□□□ -1.23
CLCNKA-204ENST00000464764 ZNF861PO60384 105 aa7.37□□□□□ -1.23
CLCNKA-204ENST00000464764 VPS13DQ5THJ4 4388 aa7.37□□□□□ -1.23
CLCNKA-204ENST00000464764 MEGF8Q7Z7M0 2845 aa7.37□□□□□ -1.23
CLCNKA-204ENST00000464764 ZNF706Q9Y5V0 76 aaPredicted RBP7.36□□□□□ -1.23
CLCNKA-204ENST00000464764 A0A087WTM6 91 aa7.36□□□□□ -1.23
CLCNKA-204ENST00000464764 RTL8CO15255 209 aa7.34□□□□□ -1.23
CLCNKA-204ENST00000464764 LINC00313P59037 77 aa7.33□□□□□ -1.24
CLCNKA-204ENST00000464764 DNAH6Q9C0G6 4158 aa7.33□□□□□ -1.24
CLCNKA-204ENST00000464764 ACYP2P14621 99 aa7.33□□□□□ -1.24
CLCNKA-204ENST00000464764 DNAH11Q96DT5 4516 aa7.28□□□□□ -1.24
CLCNKA-204ENST00000464764 PRKDCP78527 4128 aaKnown RBP7.27□□□□□ -1.25
CLCNKA-204ENST00000464764 A0A1B0GU69 56 aa7.27□□□□□ -1.25
CLCNKA-204ENST00000464764 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
CLCNKA-204ENST00000464764 IGLV7-43P04211 117 aa7.26□□□□□ -1.25
CLCNKA-204ENST00000464764 NUPR2A6NF83 97 aa7.23□□□□□ -1.25
CLCNKA-204ENST00000464764 SPINK1P00995 79 aa7.23□□□□□ -1.25
CLCNKA-204ENST00000464764 IGKV2D-30A0A075B6S6 120 aa7.23□□□□□ -1.25
CLCNKA-204ENST00000464764 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
CLCNKA-204ENST00000464764 LRP1BQ9NZR2 4599 aa7.21□□□□□ -1.26
CLCNKA-204ENST00000464764 C8orf87E5RJ46 101 aa7.2□□□□□ -1.26
CLCNKA-204ENST00000464764 FLG2Q5D862 2391 aaPredicted RBP7.2□□□□□ -1.26
CLCNKA-204ENST00000464764 DNAH5Q8TE73 4624 aa7.19□□□□□ -1.26
CLCNKA-204ENST00000464764 FAM229AH3BQW9 127 aa7.19□□□□□ -1.26
CLCNKA-204ENST00000464764 KRTAP13-2Q52LG2 175 aa7.16□□□□□ -1.26
CLCNKA-204ENST00000464764 SPATA8Q6RVD6 105 aa7.16□□□□□ -1.26
CLCNKA-204ENST00000464764 SSBP3-AS1Q7Z2R9 100 aa7.16□□□□□ -1.26
CLCNKA-204ENST00000464764 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
CLCNKA-204ENST00000464764 KRTAP16-1A8MUX0 517 aa7.14□□□□□ -1.27
CLCNKA-204ENST00000464764 PLA2G1BP04054 148 aaKnown RBP7.14□□□□□ -1.27
CLCNKA-204ENST00000464764 UQCR11O14957 56 aa7.12□□□□□ -1.27
CLCNKA-204ENST00000464764 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
CLCNKA-204ENST00000464764 C1orf134Q5TEV5 83 aa7.1□□□□□ -1.27
CLCNKA-204ENST00000464764 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
CLCNKA-204ENST00000464764 LINC01554Q52M75 96 aa7.1□□□□□ -1.27
CLCNKA-204ENST00000464764 VPS13BQ7Z7G8 4022 aa7.1□□□□□ -1.27
CLCNKA-204ENST00000464764 Q8N1X5 172 aa7.09□□□□□ -1.27
CLCNKA-204ENST00000464764 DMBT1Q9UGM3 2413 aaPredicted RBP7.06□□□□□ -1.28
CLCNKA-204ENST00000464764 LY6G6CO95867 125 aa7.05□□□□□ -1.28
CLCNKA-204ENST00000464764 FAT2Q9NYQ8 4349 aa7.05□□□□□ -1.28
CLCNKA-204ENST00000464764 C4orf48Q5BLP8 95 aa7.04□□□□□ -1.28
CLCNKA-204ENST00000464764 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
CLCNKA-204ENST00000464764 PKD1P98161 4303 aa7□□□□□ -1.29
CLCNKA-204ENST00000464764 KRTAP10-1P60331 282 aa6.99□□□□□ -1.29
CLCNKA-204ENST00000464764 HYDINQ4G0P3 5121 aa6.99□□□□□ -1.29
CLCNKA-204ENST00000464764 H3BS24 57 aa6.98□□□□□ -1.29
CLCNKA-204ENST00000464764 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
CLCNKA-204ENST00000464764 DNHD1Q96M86 4753 aa6.96□□□□□ -1.3
CLCNKA-204ENST00000464764 Q6ZSA8 131 aa6.92□□□□□ -1.3
CLCNKA-204ENST00000464764 TYMSOSQ8TAI1 123 aa6.92□□□□□ -1.3
CLCNKA-204ENST00000464764 H0YAA0 97 aa6.91□□□□□ -1.3
CLCNKA-204ENST00000464764 PKHD1P08F94 4074 aa6.89□□□□□ -1.31
CLCNKA-204ENST00000464764 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
CLCNKA-204ENST00000464764 KRTAP3-1Q9BYR8 98 aa6.85□□□□□ -1.31
CLCNKA-204ENST00000464764 A8MUU9 505 aa6.82□□□□□ -1.32
CLCNKA-204ENST00000464764 LINC00304Q8N9R0 145 aa6.82□□□□□ -1.32
CLCNKA-204ENST00000464764 FAT1Q14517 4588 aa6.81□□□□□ -1.32
CLCNKA-204ENST00000464764 A0A1B0GU33 70 aa6.8□□□□□ -1.32
CLCNKA-204ENST00000464764 SMR3BP02814 79 aaPredicted RBP6.76□□□□□ -1.33
CLCNKA-204ENST00000464764 SACSQ9NZJ4 4579 aa6.75□□□□□ -1.33
CLCNKA-204ENST00000464764 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
CLCNKA-204ENST00000464764 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
CLCNKA-204ENST00000464764 DYNC1H1Q14204 4646 aaKnown RBP6.7□□□□□ -1.34
CLCNKA-204ENST00000464764 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
CLCNKA-204ENST00000464764 A0A0D9SG42 100 aa6.67□□□□□ -1.34
CLCNKA-204ENST00000464764 COX6B2Q6YFQ2 88 aa6.66□□□□□ -1.34
CLCNKA-204ENST00000464764 ROMO1P60602 79 aa6.66□□□□□ -1.34
CLCNKA-204ENST00000464764 PKHD1L1Q86WI1 4243 aa6.64□□□□□ -1.35
CLCNKA-204ENST00000464764 K7ERS5 55 aa6.62□□□□□ -1.35
CLCNKA-204ENST00000464764 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
CLCNKA-204ENST00000464764 APOBP04114 4563 aaKnown RBP6.6□□□□□ -1.35
CLCNKA-204ENST00000464764 MYCBP2O75592 4640 aa6.59□□□□□ -1.36
CLCNKA-204ENST00000464764 HSPG2P98160 4391 aa6.58□□□□□ -1.36
CLCNKA-204ENST00000464764 LRP1Q07954 4544 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms