RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 IGLV5-48A0A075B6I7 105 aa-0.04□□□□□ -2.42
CLK1-208ENST00000464454 LINC01546A6NGU7 62 aa-0.04□□□□□ -2.42
CLK1-208ENST00000464454 H3BUA1 57 aa-0.04□□□□□ -2.42
CLK1-208ENST00000464454 LINC00308Q8TCZ7 52 aa-0.04□□□□□ -2.42
CLK1-208ENST00000464454 SACSQ9NZJ4 4579 aa-0.04□□□□□ -2.42
CLK1-208ENST00000464454 DNAH9Q9NYC9 4486 aa-0.05□□□□□ -2.42
CLK1-208ENST00000464454 FAT3Q8TDW7 4589 aa-0.05□□□□□ -2.42
CLK1-208ENST00000464454 NBASA2RRP1 2371 aa-0.05□□□□□ -2.42
CLK1-208ENST00000464454 ANK3Q12955 4377 aaKnown RBP-0.05□□□□□ -2.42
CLK1-208ENST00000464454 SVEP1Q4LDE5 3571 aa-0.05□□□□□ -2.42
CLK1-208ENST00000464454 CMC2Q9NRP2 79 aa-0.05□□□□□ -2.42
CLK1-208ENST00000464454 FLGP20930 4061 aaPredicted RBP-0.05□□□□□ -2.42
CLK1-208ENST00000464454 CUBNO60494 3623 aa-0.05□□□□□ -2.42
CLK1-208ENST00000464454 FLNAP21333 2647 aaKnown RBP-0.05□□□□□ -2.42
CLK1-208ENST00000464454 DSTQ03001 7570 aaKnown RBP-0.05□□□□□ -2.42
CLK1-208ENST00000464454 TENM2Q9NT68 2774 aa-0.06□□□□□ -2.42
CLK1-208ENST00000464454 PKD1L2Q7Z442 2459 aa-0.06□□□□□ -2.42
CLK1-208ENST00000464454 CREBBPQ92793 2442 aa-0.06□□□□□ -2.42
CLK1-208ENST00000464454 SNRPGP15A8MWD9 76 aa-0.06□□□□□ -2.42
CLK1-208ENST00000464454 DEFB106AQ8N104 65 aa-0.06□□□□□ -2.42
CLK1-208ENST00000464454 TOGARAM1Q9Y4F4 1720 aa-0.07□□□□□ -2.42
CLK1-208ENST00000464454 EFCAB6Q5THR3 1501 aa-0.07□□□□□ -2.42
CLK1-208ENST00000464454 PLNP26678 52 aa-0.07□□□□□ -2.42
CLK1-208ENST00000464454 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.07□□□□□ -2.42
CLK1-208ENST00000464454 MUC12Q9UKN1 5478 aa-0.07□□□□□ -2.42
CLK1-208ENST00000464454 PKHD1L1Q86WI1 4243 aa-0.07□□□□□ -2.42
CLK1-208ENST00000464454 CDC42BPAQ5VT25 1732 aa-0.07□□□□□ -2.42
CLK1-208ENST00000464454 DNAH3Q8TD57 4116 aa-0.07□□□□□ -2.42
CLK1-208ENST00000464454 APOBP04114 4563 aaKnown RBP-0.08□□□□□ -2.42
CLK1-208ENST00000464454 SPRR2FQ96RM1 72 aa-0.08□□□□□ -2.42
CLK1-208ENST00000464454 ABCC8Q09428 1581 aa-0.08□□□□□ -2.42
CLK1-208ENST00000464454 NF1P21359 2839 aa-0.08□□□□□ -2.42
CLK1-208ENST00000464454 ABCA5Q8WWZ7 1642 aa-0.09□□□□□ -2.42
CLK1-208ENST00000464454 NRXN3Q9Y4C0 1643 aa-0.09□□□□□ -2.42
CLK1-208ENST00000464454 KIF21BO75037 1637 aa-0.09□□□□□ -2.42
CLK1-208ENST00000464454 CEP290O15078 2479 aa-0.1□□□□□ -2.43
CLK1-208ENST00000464454 NEBP20929 6669 aa-0.11□□□□□ -2.43
CLK1-208ENST00000464454 MMP24-AS1A0A0U1RRL7 71 aa-0.11□□□□□ -2.43
CLK1-208ENST00000464454 SMIM27A0A1W2PRY6 76 aa-0.11□□□□□ -2.43
CLK1-208ENST00000464454 H3BNG1 76 aa-0.11□□□□□ -2.43
CLK1-208ENST00000464454 NOP10Q9NPE3 64 aaKnown RBP-0.11□□□□□ -2.43
CLK1-208ENST00000464454 KMT2CQ8NEZ4 4911 aaKnown RBP-0.11□□□□□ -2.43
CLK1-208ENST00000464454 RYR3Q15413 4870 aa-0.11□□□□□ -2.43
CLK1-208ENST00000464454 SETD2Q9BYW2 2564 aaPredicted RBP-0.11□□□□□ -2.43
CLK1-208ENST00000464454 ZANQ9Y493 2812 aa-0.12□□□□□ -2.43
CLK1-208ENST00000464454 DNAH2Q9P225 4427 aa-0.12□□□□□ -2.43
CLK1-208ENST00000464454 SPTBN4Q9H254 2564 aa-0.12□□□□□ -2.43
CLK1-208ENST00000464454 ZZEF1O43149 2961 aa-0.12□□□□□ -2.43
CLK1-208ENST00000464454 KRTAP19-5Q3LI72 72 aa-0.12□□□□□ -2.43
CLK1-208ENST00000464454 LAMA5O15230 3695 aa-0.13□□□□□ -2.43
CLK1-208ENST00000464454 EPG5Q9HCE0 2579 aa-0.13□□□□□ -2.43
CLK1-208ENST00000464454 A8MTW9 85 aa-0.13□□□□□ -2.43
CLK1-208ENST00000464454 TACC2O95359 2948 aa-0.13□□□□□ -2.43
CLK1-208ENST00000464454 PDZD2O15018 2839 aa-0.13□□□□□ -2.43
CLK1-208ENST00000464454 FAT1Q14517 4588 aa-0.13□□□□□ -2.43
CLK1-208ENST00000464454 VPS13DQ5THJ4 4388 aa-0.13□□□□□ -2.43
CLK1-208ENST00000464454 ANKRD36CQ5JPF3 1778 aa-0.14□□□□□ -2.43
CLK1-208ENST00000464454 LMO7Q8WWI1 1683 aa-0.14□□□□□ -2.43
CLK1-208ENST00000464454 DNAH11Q96DT5 4516 aa-0.14□□□□□ -2.43
CLK1-208ENST00000464454 DMXL1Q9Y485 3027 aa-0.14□□□□□ -2.43
CLK1-208ENST00000464454 KRTAP8-1Q8IUC2 63 aa-0.14□□□□□ -2.43
CLK1-208ENST00000464454 DNAH6Q9C0G6 4158 aa-0.14□□□□□ -2.43
CLK1-208ENST00000464454 PCLOQ9Y6V0 5065 aa-0.14□□□□□ -2.43
CLK1-208ENST00000464454 STAB2Q8WWQ8 2551 aa-0.14□□□□□ -2.43
CLK1-208ENST00000464454 MTORP42345 2549 aa-0.15□□□□□ -2.43
CLK1-208ENST00000464454 HERC1Q15751 4861 aa-0.15□□□□□ -2.43
CLK1-208ENST00000464454 SPG11Q96JI7 2443 aa-0.15□□□□□ -2.43
CLK1-208ENST00000464454 MAP1AP78559 2803 aaPredicted RBP-0.15□□□□□ -2.43
CLK1-208ENST00000464454 DOPEY1Q5JWR5 2465 aa-0.15□□□□□ -2.43
CLK1-208ENST00000464454 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
CLK1-208ENST00000464454 AKAP9Q99996 3911 aa-0.15□□□□□ -2.43
CLK1-208ENST00000464454 SRRM2Q9UQ35 2752 aaKnown RBP-0.16□□□□□ -2.43
CLK1-208ENST00000464454 HERC2O95714 4834 aa-0.16□□□□□ -2.43
CLK1-208ENST00000464454 KIAA1109Q2LD37 5005 aa-0.16□□□□□ -2.44
CLK1-208ENST00000464454 M0QZ58 72 aa-0.16□□□□□ -2.44
CLK1-208ENST00000464454 TNP1P09430 55 aa-0.16□□□□□ -2.44
CLK1-208ENST00000464454 TEP1Q99973 2627 aaKnown RBP-0.16□□□□□ -2.44
CLK1-208ENST00000464454 MUC2Q02817 5179 aa-0.17□□□□□ -2.44
CLK1-208ENST00000464454 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.17□□□□□ -2.44
CLK1-208ENST00000464454 ANKRD11Q6UB99 2663 aaPredicted RBP-0.17□□□□□ -2.44
CLK1-208ENST00000464454 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.17□□□□□ -2.44
CLK1-208ENST00000464454 SMIM2Q9BVW6 85 aa-0.17□□□□□ -2.44
CLK1-208ENST00000464454 TGP01266 2768 aa-0.17□□□□□ -2.44
CLK1-208ENST00000464454 TRPM2O94759 1503 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 NBPF19A0A087WUL8 3843 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 FASNP49327 2511 aaKnown RBP-0.18□□□□□ -2.44
CLK1-208ENST00000464454 FAM186AA6NE01 2351 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 HIVEP1P15822 2718 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 DNAH1Q9P2D7 4330 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 DEFB131AP59861 70 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 ABRACLQ9P1F3 81 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 KAAG1Q9UBP8 84 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 ACACAQ13085 2346 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 GCN1Q92616 2671 aaKnown RBP-0.18□□□□□ -2.44
CLK1-208ENST00000464454 RANBP2P49792 3224 aaKnown RBP-0.18□□□□□ -2.44
CLK1-208ENST00000464454 NFAT5O94916 1531 aa-0.18□□□□□ -2.44
CLK1-208ENST00000464454 DNAH8Q96JB1 4490 aa-0.19□□□□□ -2.44
CLK1-208ENST00000464454 M0QY20 66 aa-0.19□□□□□ -2.44
CLK1-208ENST00000464454 TFF3Q07654 80 aa-0.19□□□□□ -2.44
CLK1-208ENST00000464454 KRTAP19-7Q3SYF9 63 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms