RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 C1orf134Q5TEV5 83 aa2.31□□□□□ -2.04
CCNL1-204ENST00000464316 CIRBP-AS1Q8TBR5 109 aa2.31□□□□□ -2.04
CCNL1-204ENST00000464316 XP32Q5T750 250 aa2.31□□□□□ -2.04
CCNL1-204ENST00000464316 ZNF861PO60384 105 aa2.31□□□□□ -2.04
CCNL1-204ENST00000464316 KRTAP10-11P60412 298 aa2.31□□□□□ -2.04
CCNL1-204ENST00000464316 Q5W150 140 aa2.31□□□□□ -2.04
CCNL1-204ENST00000464316 FLNCQ14315 2725 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 J3QKU1 62 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 IGKV2-30P06310 120 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 KRTAP4-7Q9BYR0 210 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 CFAP46Q8IYW2 2715 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 FBN2P35556 2912 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 IGKV2D-30A0A075B6S6 120 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 WWC2-AS2Q96NR7 200 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 HSPG2P98160 4391 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 KRTAP4-8A0A0G2JLE6 195 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 K7EIL1 84 aa2.3□□□□□ -2.04
CCNL1-204ENST00000464316 NOTCH2NLQ7Z3S9 236 aa2.29□□□□□ -2.04
CCNL1-204ENST00000464316 LY6G6CO95867 125 aa2.28□□□□□ -2.04
CCNL1-204ENST00000464316 SPINK1P00995 79 aa2.28□□□□□ -2.04
CCNL1-204ENST00000464316 KRTAP11-1Q8IUC1 163 aa2.28□□□□□ -2.04
CCNL1-204ENST00000464316 NF1P21359 2839 aa2.28□□□□□ -2.04
CCNL1-204ENST00000464316 CRYBG3Q68DQ2 2970 aa2.28□□□□□ -2.04
CCNL1-204ENST00000464316 IGLV5-52A0A0A0MRZ9 124 aa2.27□□□□□ -2.05
CCNL1-204ENST00000464316 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
CCNL1-204ENST00000464316 KRTAP13-3Q3SY46 172 aa2.27□□□□□ -2.05
CCNL1-204ENST00000464316 NBDYA0A0U1RRE5 68 aa2.27□□□□□ -2.05
CCNL1-204ENST00000464316 KRTAP9-2Q9BYQ4 174 aa2.27□□□□□ -2.05
CCNL1-204ENST00000464316 PSORS1C2Q9UIG4 136 aa2.27□□□□□ -2.05
CCNL1-204ENST00000464316 DNAH11Q96DT5 4516 aa2.27□□□□□ -2.05
CCNL1-204ENST00000464316 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.27□□□□□ -2.05
CCNL1-204ENST00000464316 SPACA4Q8TDM5 124 aa2.27□□□□□ -2.05
CCNL1-204ENST00000464316 DNAH10Q8IVF4 4471 aa2.27□□□□□ -2.05
CCNL1-204ENST00000464316 CELSR2Q9HCU4 2923 aa2.26□□□□□ -2.05
CCNL1-204ENST00000464316 LCE2BO14633 110 aa2.26□□□□□ -2.05
CCNL1-204ENST00000464316 ROMO1P60602 79 aa2.26□□□□□ -2.05
CCNL1-204ENST00000464316 IGSF10Q6WRI0 2623 aa2.26□□□□□ -2.05
CCNL1-204ENST00000464316 ATRQ13535 2644 aa2.25□□□□□ -2.05
CCNL1-204ENST00000464316 A0A1B0GU33 70 aa2.25□□□□□ -2.05
CCNL1-204ENST00000464316 KRTAP1-5Q9BYS1 174 aa2.25□□□□□ -2.05
CCNL1-204ENST00000464316 ANAPC11Q9NYG5 84 aa2.25□□□□□ -2.05
CCNL1-204ENST00000464316 NUPR2A6NF83 97 aa2.24□□□□□ -2.05
CCNL1-204ENST00000464316 APLNQ9ULZ1 77 aa2.24□□□□□ -2.05
CCNL1-204ENST00000464316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.24□□□□□ -2.05
CCNL1-204ENST00000464316 SACSQ9NZJ4 4579 aa2.24□□□□□ -2.05
CCNL1-204ENST00000464316 TENM4Q6N022 2769 aa2.24□□□□□ -2.05
CCNL1-204ENST00000464316 LCE2AQ5TA79 106 aaPredicted RBP2.24□□□□□ -2.05
CCNL1-204ENST00000464316 NIPBLQ6KC79 2804 aaeCLIP2.24□□□□□ -2.05
CCNL1-204ENST00000464316 BAHCC1Q9P281 2608 aa2.24□□□□□ -2.05
CCNL1-204ENST00000464316 HELZ2Q9BYK8 2649 aaKnown RBP2.24□□□□□ -2.05
CCNL1-204ENST00000464316 TEP1Q99973 2627 aaKnown RBP2.23□□□□□ -2.05
CCNL1-204ENST00000464316 A0A087WTM6 91 aa2.23□□□□□ -2.05
CCNL1-204ENST00000464316 A8MUU9 505 aa2.23□□□□□ -2.05
CCNL1-204ENST00000464316 SPINT4Q6UDR6 99 aa2.23□□□□□ -2.05
CCNL1-204ENST00000464316 FASNP49327 2511 aaKnown RBP2.22□□□□□ -2.05
CCNL1-204ENST00000464316 KRTAP9-6A0A140TA67 174 aa2.22□□□□□ -2.05
CCNL1-204ENST00000464316 PANO1I0J062 215 aa2.22□□□□□ -2.05
CCNL1-204ENST00000464316 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
CCNL1-204ENST00000464316 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
CCNL1-204ENST00000464316 H1FX-AS1Q4G0G2 97 aa2.21□□□□□ -2.06
CCNL1-204ENST00000464316 Q8N1X5 172 aa2.21□□□□□ -2.06
CCNL1-204ENST00000464316 LINC00304Q8N9R0 145 aa2.21□□□□□ -2.06
CCNL1-204ENST00000464316 HIVEP1P15822 2718 aa2.21□□□□□ -2.06
CCNL1-204ENST00000464316 KRTAP24-1Q3LI83 254 aa2.2□□□□□ -2.06
CCNL1-204ENST00000464316 Q6ZSA8 131 aa2.2□□□□□ -2.06
CCNL1-204ENST00000464316 LCE2CQ5TA81 110 aa2.19□□□□□ -2.06
CCNL1-204ENST00000464316 Q6ZRN7 208 aaPredicted RBP2.19□□□□□ -2.06
CCNL1-204ENST00000464316 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
CCNL1-204ENST00000464316 CRIPTQ9P021 101 aa2.18□□□□□ -2.06
CCNL1-204ENST00000464316 H0YAA0 97 aa2.18□□□□□ -2.06
CCNL1-204ENST00000464316 KRTAP9-9Q9BYP9 154 aa2.18□□□□□ -2.06
CCNL1-204ENST00000464316 KRTAP9-4Q9BYQ2 154 aa2.18□□□□□ -2.06
CCNL1-204ENST00000464316 KRTAP4-9Q9BYQ8 210 aa2.18□□□□□ -2.06
CCNL1-204ENST00000464316 PLECQ15149 4684 aaKnown RBP2.18□□□□□ -2.06
CCNL1-204ENST00000464316 FLNBO75369 2602 aaKnown RBP2.17□□□□□ -2.06
CCNL1-204ENST00000464316 FAT1Q14517 4588 aa2.17□□□□□ -2.06
CCNL1-204ENST00000464316 DYNC1H1Q14204 4646 aaKnown RBP2.17□□□□□ -2.06
CCNL1-204ENST00000464316 KRTAP16-1A8MUX0 517 aa2.17□□□□□ -2.06
CCNL1-204ENST00000464316 TYMSOSQ8TAI1 123 aa2.17□□□□□ -2.06
CCNL1-204ENST00000464316 USP24Q9UPU5 2620 aa2.17□□□□□ -2.06
CCNL1-204ENST00000464316 RPL37P61927 97 aaKnown RBP2.17□□□□□ -2.06
CCNL1-204ENST00000464316 VWFP04275 2813 aa2.16□□□□□ -2.06
CCNL1-204ENST00000464316 KRTAP9-8Q9BYQ0 159 aa2.16□□□□□ -2.06
CCNL1-204ENST00000464316 MAST4O15021 2626 aa2.16□□□□□ -2.06
CCNL1-204ENST00000464316 COX6B2Q6YFQ2 88 aa2.16□□□□□ -2.06
CCNL1-204ENST00000464316 CSMD2Q7Z408 3487 aa2.16□□□□□ -2.06
CCNL1-204ENST00000464316 TENM3Q9P273 2699 aa2.15□□□□□ -2.07
CCNL1-204ENST00000464316 APOBP04114 4563 aaKnown RBP2.15□□□□□ -2.07
CCNL1-204ENST00000464316 FBN3Q75N90 2809 aa2.15□□□□□ -2.07
CCNL1-204ENST00000464316 COL6A5A8TX70 2615 aa2.15□□□□□ -2.07
CCNL1-204ENST00000464316 NOTCH1P46531 2555 aa2.14□□□□□ -2.07
CCNL1-204ENST00000464316 NBEAL1Q6ZS30 2694 aa2.14□□□□□ -2.07
CCNL1-204ENST00000464316 ITPR2Q14571 2701 aa2.14□□□□□ -2.07
CCNL1-204ENST00000464316 DNHD1Q96M86 4753 aa2.14□□□□□ -2.07
CCNL1-204ENST00000464316 NSD1Q96L73 2696 aaPredicted RBP2.14□□□□□ -2.07
CCNL1-204ENST00000464316 SRRM2Q9UQ35 2752 aaKnown RBP2.13□□□□□ -2.07
CCNL1-204ENST00000464316 KRTAP13-2Q52LG2 175 aa2.13□□□□□ -2.07
CCNL1-204ENST00000464316 FLG2Q5D862 2391 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms