RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CASC10Q5T4H9 136 aa4.4□□□□□ -1.71
CLSTN1-204ENST00000464286 SMR3AQ99954 134 aa4.4□□□□□ -1.71
CLSTN1-204ENST00000464286 VPS13CQ709C8 3753 aa4.39□□□□□ -1.71
CLSTN1-204ENST00000464286 C8orf87E5RJ46 101 aa4.39□□□□□ -1.71
CLSTN1-204ENST00000464286 UBE2DNLQ8IWF7 75 aa4.39□□□□□ -1.71
CLSTN1-204ENST00000464286 AKAP9Q99996 3911 aa4.39□□□□□ -1.71
CLSTN1-204ENST00000464286 NBEAL2Q6ZNJ1 2754 aa4.39□□□□□ -1.71
CLSTN1-204ENST00000464286 HRES1P13985 223 aa4.38□□□□□ -1.71
CLSTN1-204ENST00000464286 A0A0G2JQZ4 141 aa4.37□□□□□ -1.71
CLSTN1-204ENST00000464286 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
CLSTN1-204ENST00000464286 KRTAP13-1Q8IUC0 172 aa4.36□□□□□ -1.71
CLSTN1-204ENST00000464286 Q96NJ1 140 aa4.35□□□□□ -1.71
CLSTN1-204ENST00000464286 ACANP16112 2415 aa4.35□□□□□ -1.71
CLSTN1-204ENST00000464286 CSMD2Q7Z408 3487 aa4.34□□□□□ -1.71
CLSTN1-204ENST00000464286 NIPBLQ6KC79 2804 aaeCLIP4.34□□□□□ -1.71
CLSTN1-204ENST00000464286 PKD1L1Q8TDX9 2849 aa4.34□□□□□ -1.72
CLSTN1-204ENST00000464286 IGLV9-49A0A0B4J1Y8 123 aa4.33□□□□□ -1.72
CLSTN1-204ENST00000464286 A0A1B0GU69 56 aa4.33□□□□□ -1.72
CLSTN1-204ENST00000464286 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
CLSTN1-204ENST00000464286 A8MU10 97 aa4.31□□□□□ -1.72
CLSTN1-204ENST00000464286 SPINK7P58062 85 aa4.31□□□□□ -1.72
CLSTN1-204ENST00000464286 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
CLSTN1-204ENST00000464286 UQCR11O14957 56 aa4.3□□□□□ -1.72
CLSTN1-204ENST00000464286 CHTF8P0CG12 524 aa4.3□□□□□ -1.72
CLSTN1-204ENST00000464286 SPACA4Q8TDM5 124 aa4.3□□□□□ -1.72
CLSTN1-204ENST00000464286 CUBNO60494 3623 aa4.29□□□□□ -1.72
CLSTN1-204ENST00000464286 SPATA8Q6RVD6 105 aa4.29□□□□□ -1.72
CLSTN1-204ENST00000464286 SSBP3-AS1Q7Z2R9 100 aa4.29□□□□□ -1.72
CLSTN1-204ENST00000464286 PRR26Q8N8Z3 221 aa4.29□□□□□ -1.72
CLSTN1-204ENST00000464286 RYR3Q15413 4870 aa4.28□□□□□ -1.72
CLSTN1-204ENST00000464286 NBDYA0A0U1RRE5 68 aa4.28□□□□□ -1.72
CLSTN1-204ENST00000464286 ZNF861PO60384 105 aa4.28□□□□□ -1.72
CLSTN1-204ENST00000464286 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
CLSTN1-204ENST00000464286 ANK3Q12955 4377 aaKnown RBP4.28□□□□□ -1.72
CLSTN1-204ENST00000464286 BIRC6Q9NR09 4857 aa4.28□□□□□ -1.72
CLSTN1-204ENST00000464286 NUPR2A6NF83 97 aa4.27□□□□□ -1.73
CLSTN1-204ENST00000464286 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
CLSTN1-204ENST00000464286 APLNQ9ULZ1 77 aa4.27□□□□□ -1.73
CLSTN1-204ENST00000464286 COL6A5A8TX70 2615 aa4.26□□□□□ -1.73
CLSTN1-204ENST00000464286 IGLV5-52A0A0A0MRZ9 124 aa4.26□□□□□ -1.73
CLSTN1-204ENST00000464286 LINC00313P59037 77 aa4.26□□□□□ -1.73
CLSTN1-204ENST00000464286 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
CLSTN1-204ENST00000464286 KRTAP13-3Q3SY46 172 aa4.26□□□□□ -1.73
CLSTN1-204ENST00000464286 KRTAP1-5Q9BYS1 174 aa4.26□□□□□ -1.73
CLSTN1-204ENST00000464286 LINC01554Q52M75 96 aa4.25□□□□□ -1.73
CLSTN1-204ENST00000464286 TGP01266 2768 aa4.24□□□□□ -1.73
CLSTN1-204ENST00000464286 KRTAP24-1Q3LI83 254 aa4.24□□□□□ -1.73
CLSTN1-204ENST00000464286 NSD1Q96L73 2696 aaPredicted RBP4.24□□□□□ -1.73
CLSTN1-204ENST00000464286 K7EIL1 84 aa4.23□□□□□ -1.73
CLSTN1-204ENST00000464286 IGKV2-30P06310 120 aa4.23□□□□□ -1.73
CLSTN1-204ENST00000464286 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
CLSTN1-204ENST00000464286 RTL8CO15255 209 aa4.22□□□□□ -1.73
CLSTN1-204ENST00000464286 Q5W150 140 aa4.22□□□□□ -1.73
CLSTN1-204ENST00000464286 PSORS1C2Q9UIG4 136 aa4.22□□□□□ -1.73
CLSTN1-204ENST00000464286 ZNF469Q96JG9 3925 aaPredicted RBP4.22□□□□□ -1.73
CLSTN1-204ENST00000464286 VWFP04275 2813 aa4.22□□□□□ -1.73
CLSTN1-204ENST00000464286 SPINK6Q6UWN8 80 aa4.21□□□□□ -1.74
CLSTN1-204ENST00000464286 A0A087WTM6 91 aa4.2□□□□□ -1.74
CLSTN1-204ENST00000464286 Q6ZRN7 208 aaPredicted RBP4.2□□□□□ -1.74
CLSTN1-204ENST00000464286 IGLV7-43P04211 117 aa4.19□□□□□ -1.74
CLSTN1-204ENST00000464286 CIRBP-AS1Q8TBR5 109 aa4.19□□□□□ -1.74
CLSTN1-204ENST00000464286 PCLOQ9Y6V0 5065 aa4.19□□□□□ -1.74
CLSTN1-204ENST00000464286 EPPK1P58107 5090 aaKnown RBP4.18□□□□□ -1.74
CLSTN1-204ENST00000464286 NOTCH2NLQ7Z3S9 236 aa4.17□□□□□ -1.74
CLSTN1-204ENST00000464286 IGKV2D-30A0A075B6S6 120 aa4.16□□□□□ -1.74
CLSTN1-204ENST00000464286 PANO1I0J062 215 aa4.16□□□□□ -1.74
CLSTN1-204ENST00000464286 TENM1Q9UKZ4 2725 aa4.16□□□□□ -1.74
CLSTN1-204ENST00000464286 TENM3Q9P273 2699 aa4.15□□□□□ -1.75
CLSTN1-204ENST00000464286 HYDINQ4G0P3 5121 aa4.14□□□□□ -1.75
CLSTN1-204ENST00000464286 TENM2Q9NT68 2774 aa4.14□□□□□ -1.75
CLSTN1-204ENST00000464286 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
CLSTN1-204ENST00000464286 LY6G6CO95867 125 aa4.13□□□□□ -1.75
CLSTN1-204ENST00000464286 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
CLSTN1-204ENST00000464286 K7ERS5 55 aa4.12□□□□□ -1.75
CLSTN1-204ENST00000464286 DNAH1Q9P2D7 4330 aa4.11□□□□□ -1.75
CLSTN1-204ENST00000464286 RYR1P21817 5038 aa4.09□□□□□ -1.75
CLSTN1-204ENST00000464286 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
CLSTN1-204ENST00000464286 C1orf134Q5TEV5 83 aa4.09□□□□□ -1.75
CLSTN1-204ENST00000464286 ANAPC11Q9NYG5 84 aa4.09□□□□□ -1.75
CLSTN1-204ENST00000464286 SPINK1P00995 79 aa4.08□□□□□ -1.76
CLSTN1-204ENST00000464286 MGAM2Q2M2H8 2515 aa4.08□□□□□ -1.76
CLSTN1-204ENST00000464286 CSAG1Q6PB30 78 aa4.08□□□□□ -1.76
CLSTN1-204ENST00000464286 ANK2Q01484 3957 aa4.08□□□□□ -1.76
CLSTN1-204ENST00000464286 MEGF8Q7Z7M0 2845 aa4.08□□□□□ -1.76
CLSTN1-204ENST00000464286 ALMS1Q8TCU4 4167 aa4.07□□□□□ -1.76
CLSTN1-204ENST00000464286 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
CLSTN1-204ENST00000464286 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
CLSTN1-204ENST00000464286 A0A1B0GU33 70 aa4.02□□□□□ -1.77
CLSTN1-204ENST00000464286 A8MUU9 505 aa4.02□□□□□ -1.77
CLSTN1-204ENST00000464286 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
CLSTN1-204ENST00000464286 KRTAP2-2Q9BYT5 123 aa4.02□□□□□ -1.77
CLSTN1-204ENST00000464286 DNAH3Q8TD57 4116 aa4.02□□□□□ -1.77
CLSTN1-204ENST00000464286 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
CLSTN1-204ENST00000464286 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
CLSTN1-204ENST00000464286 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
CLSTN1-204ENST00000464286 RYR2Q92736 4967 aa3.99□□□□□ -1.77
CLSTN1-204ENST00000464286 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
CLSTN1-204ENST00000464286 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
CLSTN1-204ENST00000464286 HUWE1Q7Z6Z7 4374 aaKnown RBP3.97□□□□□ -1.77
CLSTN1-204ENST00000464286 TRRAPQ9Y4A5 3859 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms