RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 A8MWP4 228 aa5.95□□□□□ -1.46
PTPRD-207ENST00000463477 ZCCHC13Q8WW36 166 aaKnown RBP5.95□□□□□ -1.46
PTPRD-207ENST00000463477 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-207ENST00000463477 PRR15Q8IV56 129 aa5.94□□□□□ -1.46
PTPRD-207ENST00000463477 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
PTPRD-207ENST00000463477 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
PTPRD-207ENST00000463477 DMBT1Q9UGM3 2413 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-207ENST00000463477 ZNF861PO60384 105 aa5.93□□□□□ -1.46
PTPRD-207ENST00000463477 DEFB116Q30KQ4 102 aa5.91□□□□□ -1.46
PTPRD-207ENST00000463477 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.46
PTPRD-207ENST00000463477 H3BPC8 53 aa5.9□□□□□ -1.47
PTPRD-207ENST00000463477 CASC2Q6XLA1 102 aa5.9□□□□□ -1.47
PTPRD-207ENST00000463477 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.47
PTPRD-207ENST00000463477 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
PTPRD-207ENST00000463477 WFDC13Q8IUB5 93 aa5.89□□□□□ -1.47
PTPRD-207ENST00000463477 Q96NJ1 140 aa5.89□□□□□ -1.47
PTPRD-207ENST00000463477 IGLV9-49A0A0B4J1Y8 123 aa5.88□□□□□ -1.47
PTPRD-207ENST00000463477 NDUFB1O75438 58 aa5.88□□□□□ -1.47
PTPRD-207ENST00000463477 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
PTPRD-207ENST00000463477 Q5XG85 94 aa5.88□□□□□ -1.47
PTPRD-207ENST00000463477 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
PTPRD-207ENST00000463477 HERC1Q15751 4861 aa5.87□□□□□ -1.47
PTPRD-207ENST00000463477 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
PTPRD-207ENST00000463477 IGLV7-43P04211 117 aa5.87□□□□□ -1.47
PTPRD-207ENST00000463477 MP68P56378 58 aa5.87□□□□□ -1.47
PTPRD-207ENST00000463477 ASB16-AS1Q495Z4 193 aa5.87□□□□□ -1.47
PTPRD-207ENST00000463477 MOBPQ13875 183 aa5.86□□□□□ -1.47
PTPRD-207ENST00000463477 SPINK6Q6UWN8 80 aa5.86□□□□□ -1.47
PTPRD-207ENST00000463477 CD164Q04900 197 aa5.85□□□□□ -1.47
PTPRD-207ENST00000463477 CYP4F30PQ9H0H9 118 aa5.85□□□□□ -1.47
PTPRD-207ENST00000463477 TRAV22A0A0B4J277 110 aa5.83□□□□□ -1.48
PTPRD-207ENST00000463477 hDV103S1A0JD37 113 aa5.83□□□□□ -1.48
PTPRD-207ENST00000463477 TP53AIP1Q9HCN2 124 aa5.82□□□□□ -1.48
PTPRD-207ENST00000463477 H0Y9P7 68 aa5.82□□□□□ -1.48
PTPRD-207ENST00000463477 SSBP3-AS1Q7Z2R9 100 aa5.82□□□□□ -1.48
PTPRD-207ENST00000463477 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
PTPRD-207ENST00000463477 FP248Q71RG6 208 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-207ENST00000463477 SPANXA2-OT1Q8N9U9 137 aa5.81□□□□□ -1.48
PTPRD-207ENST00000463477 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
PTPRD-207ENST00000463477 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
PTPRD-207ENST00000463477 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
PTPRD-207ENST00000463477 C4orf26Q17RF5 130 aa5.79□□□□□ -1.48
PTPRD-207ENST00000463477 TNXBP22105 4242 aa5.79□□□□□ -1.48
PTPRD-207ENST00000463477 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-207ENST00000463477 HRCT1Q6UXD1 115 aa5.78□□□□□ -1.48
PTPRD-207ENST00000463477 ANAPC11Q9NYG5 84 aa5.78□□□□□ -1.48
PTPRD-207ENST00000463477 KRTAP10-8P60410 259 aa5.77□□□□□ -1.49
PTPRD-207ENST00000463477 FAM229BQ4G0N7 80 aa5.77□□□□□ -1.49
PTPRD-207ENST00000463477 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
PTPRD-207ENST00000463477 MRPL34Q9BQ48 92 aaKnown RBP5.75□□□□□ -1.49
PTPRD-207ENST00000463477 IGHV6-1A0A0B4J1U7 121 aa5.74□□□□□ -1.49
PTPRD-207ENST00000463477 C8orf87E5RJ46 101 aa5.72□□□□□ -1.49
PTPRD-207ENST00000463477 KRTAP1-4P0C5Y4 121 aa5.72□□□□□ -1.49
PTPRD-207ENST00000463477 IGLV7-46A0A075B6I9 117 aa5.7□□□□□ -1.5
PTPRD-207ENST00000463477 Q1T7F1 81 aa5.7□□□□□ -1.5
PTPRD-207ENST00000463477 KRTAP13-2Q52LG2 175 aa5.69□□□□□ -1.5
PTPRD-207ENST00000463477 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
PTPRD-207ENST00000463477 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
PTPRD-207ENST00000463477 A0A087X002 238 aa5.68□□□□□ -1.5
PTPRD-207ENST00000463477 NOTCH2NLQ7Z3S9 236 aa5.68□□□□□ -1.5
PTPRD-207ENST00000463477 NDUFS5O43920 106 aa5.67□□□□□ -1.5
PTPRD-207ENST00000463477 PRR4Q16378 134 aa5.67□□□□□ -1.5
PTPRD-207ENST00000463477 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
PTPRD-207ENST00000463477 V9GYY9 64 aa5.66□□□□□ -1.5
PTPRD-207ENST00000463477 LOC101927531A0A1B0GV80 90 aa5.66□□□□□ -1.5
PTPRD-207ENST00000463477 MPLKIPQ8TAP9 179 aa5.66□□□□□ -1.5
PTPRD-207ENST00000463477 LIMD2Q9BT23 127 aa5.66□□□□□ -1.5
PTPRD-207ENST00000463477 C1orf195Q5TG92 126 aa5.65□□□□□ -1.51
PTPRD-207ENST00000463477 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-207ENST00000463477 LINC00313P59037 77 aa5.63□□□□□ -1.51
PTPRD-207ENST00000463477 PRO0628Q9UI54 55 aa5.62□□□□□ -1.51
PTPRD-207ENST00000463477 PCOTHQ58A44 107 aa5.61□□□□□ -1.51
PTPRD-207ENST00000463477 SPINK1P00995 79 aa5.6□□□□□ -1.51
PTPRD-207ENST00000463477 RPS29P62273 56 aaKnown RBP5.6□□□□□ -1.51
PTPRD-207ENST00000463477 COA5Q86WW8 74 aa5.6□□□□□ -1.51
PTPRD-207ENST00000463477 TYMSOSQ8TAI1 123 aa5.6□□□□□ -1.51
PTPRD-207ENST00000463477 Q5W150 140 aa5.59□□□□□ -1.51
PTPRD-207ENST00000463477 KRTAP16-1A8MUX0 517 aa5.58□□□□□ -1.52
PTPRD-207ENST00000463477 UBR4Q5T4S7 5183 aa5.56□□□□□ -1.52
PTPRD-207ENST00000463477 SPAG11AQ6PDA7 123 aa5.56□□□□□ -1.52
PTPRD-207ENST00000463477 LRP2P98164 4655 aa5.54□□□□□ -1.52
PTPRD-207ENST00000463477 HRES1P13985 223 aa5.53□□□□□ -1.52
PTPRD-207ENST00000463477 LINC00304Q8N9R0 145 aa5.53□□□□□ -1.52
PTPRD-207ENST00000463477 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
PTPRD-207ENST00000463477 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
PTPRD-207ENST00000463477 A8MUN3 132 aa5.51□□□□□ -1.53
PTPRD-207ENST00000463477 PSPHP1O15172 72 aa5.51□□□□□ -1.53
PTPRD-207ENST00000463477 Q5VV11 94 aa5.51□□□□□ -1.53
PTPRD-207ENST00000463477 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
PTPRD-207ENST00000463477 LINC01558Q9Y6Z2 57 aa5.5□□□□□ -1.53
PTPRD-207ENST00000463477 ACYP2P14621 99 aa5.5□□□□□ -1.53
PTPRD-207ENST00000463477 Q75L30 129 aa5.49□□□□□ -1.53
PTPRD-207ENST00000463477 LPAP08519 4548 aa5.48□□□□□ -1.53
PTPRD-207ENST00000463477 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
PTPRD-207ENST00000463477 RETNLBQ9BQ08 111 aa5.43□□□□□ -1.54
PTPRD-207ENST00000463477 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
PTPRD-207ENST00000463477 CHKB-CPT1BH3BT56 60 aa5.42□□□□□ -1.54
PTPRD-207ENST00000463477 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
PTPRD-207ENST00000463477 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
PTPRD-207ENST00000463477 C7orf65Q6ZTY9 151 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms