RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 A0A1B0GU69 56 aa2.3□□□□□ -2.04
COPS3-205ENST00000463097 DEFB135Q30KP9 77 aa2.3□□□□□ -2.04
COPS3-205ENST00000463097 Q96NJ1 140 aa2.3□□□□□ -2.04
COPS3-205ENST00000463097 UTP20O75691 2785 aaKnown RBP2.3□□□□□ -2.04
COPS3-205ENST00000463097 EYSQ5T1H1 3165 aa2.29□□□□□ -2.04
COPS3-205ENST00000463097 INE1O15225 51 aa2.29□□□□□ -2.04
COPS3-205ENST00000463097 SPTA1P02549 2419 aa2.28□□□□□ -2.04
COPS3-205ENST00000463097 MUC6Q6W4X9 2439 aa2.28□□□□□ -2.04
COPS3-205ENST00000463097 CSMD1Q96PZ7 3565 aa2.28□□□□□ -2.05
COPS3-205ENST00000463097 ITPR1Q14643 2758 aa2.27□□□□□ -2.05
COPS3-205ENST00000463097 KMT2BQ9UMN6 2715 aaPredicted RBP2.27□□□□□ -2.05
COPS3-205ENST00000463097 DCHS1Q96JQ0 3298 aa2.27□□□□□ -2.05
COPS3-205ENST00000463097 ALMS1Q8TCU4 4167 aa2.27□□□□□ -2.05
COPS3-205ENST00000463097 DEFB4AO15263 64 aa2.27□□□□□ -2.05
COPS3-205ENST00000463097 HTN3P15516 51 aa2.27□□□□□ -2.05
COPS3-205ENST00000463097 CEP295Q9C0D2 2601 aa2.27□□□□□ -2.05
COPS3-205ENST00000463097 ATMQ13315 3056 aa2.27□□□□□ -2.05
COPS3-205ENST00000463097 BSNQ9UPA5 3926 aa2.27□□□□□ -2.05
COPS3-205ENST00000463097 CSAG1Q6PB30 78 aa2.26□□□□□ -2.05
COPS3-205ENST00000463097 DOPEY1Q5JWR5 2465 aa2.25□□□□□ -2.05
COPS3-205ENST00000463097 EPG5Q9HCE0 2579 aa2.25□□□□□ -2.05
COPS3-205ENST00000463097 MYO9AB2RTY4 2548 aa2.25□□□□□ -2.05
COPS3-205ENST00000463097 MAST4O15021 2626 aa2.24□□□□□ -2.05
COPS3-205ENST00000463097 SPTBN4Q9H254 2564 aa2.24□□□□□ -2.05
COPS3-205ENST00000463097 FASNP49327 2511 aaKnown RBP2.24□□□□□ -2.05
COPS3-205ENST00000463097 PRLHP81277 87 aa2.24□□□□□ -2.05
COPS3-205ENST00000463097 NIPBLQ6KC79 2804 aaeCLIP2.24□□□□□ -2.05
COPS3-205ENST00000463097 CSPG4Q6UVK1 2322 aa2.24□□□□□ -2.05
COPS3-205ENST00000463097 TLN2Q9Y4G6 2542 aa2.24□□□□□ -2.05
COPS3-205ENST00000463097 NCOR2Q9Y618 2525 aa2.24□□□□□ -2.05
COPS3-205ENST00000463097 NBPF19A0A087WUL8 3843 aa2.24□□□□□ -2.05
COPS3-205ENST00000463097 APCP25054 2843 aa2.23□□□□□ -2.05
COPS3-205ENST00000463097 CRYBG3Q68DQ2 2970 aa2.23□□□□□ -2.05
COPS3-205ENST00000463097 A0A096LNI7 61 aa2.23□□□□□ -2.05
COPS3-205ENST00000463097 HIVEP3Q5T1R4 2406 aa2.23□□□□□ -2.05
COPS3-205ENST00000463097 CELSR2Q9HCU4 2923 aa2.23□□□□□ -2.05
COPS3-205ENST00000463097 GVINP1Q7Z2Y8 2422 aa2.22□□□□□ -2.05
COPS3-205ENST00000463097 NAV2Q8IVL1 2488 aa2.22□□□□□ -2.05
COPS3-205ENST00000463097 LY6G6CO95867 125 aa2.22□□□□□ -2.05
COPS3-205ENST00000463097 FLNBO75369 2602 aaKnown RBP2.22□□□□□ -2.05
COPS3-205ENST00000463097 ASPMQ8IZT6 3477 aa2.22□□□□□ -2.05
COPS3-205ENST00000463097 COL12A1Q99715 3063 aa2.21□□□□□ -2.05
COPS3-205ENST00000463097 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
COPS3-205ENST00000463097 SSBP3-AS1Q7Z2R9 100 aa2.21□□□□□ -2.06
COPS3-205ENST00000463097 TEX15Q9BXT5 2789 aa2.21□□□□□ -2.06
COPS3-205ENST00000463097 CFAP46Q8IYW2 2715 aa2.21□□□□□ -2.06
COPS3-205ENST00000463097 GCN1Q92616 2671 aaKnown RBP2.21□□□□□ -2.06
COPS3-205ENST00000463097 JMJD1CQ15652 2540 aa2.21□□□□□ -2.06
COPS3-205ENST00000463097 USP9YO00507 2555 aaPredicted RBP2.2□□□□□ -2.06
COPS3-205ENST00000463097 NF1P21359 2839 aa2.2□□□□□ -2.06
COPS3-205ENST00000463097 NBASA2RRP1 2371 aa2.2□□□□□ -2.06
COPS3-205ENST00000463097 NBEAL2Q6ZNJ1 2754 aa2.2□□□□□ -2.06
COPS3-205ENST00000463097 USP9XQ93008 2570 aaPredicted RBP2.2□□□□□ -2.06
COPS3-205ENST00000463097 TENM2Q9NT68 2774 aa2.2□□□□□ -2.06
COPS3-205ENST00000463097 ZANQ9Y493 2812 aa2.19□□□□□ -2.06
COPS3-205ENST00000463097 SVEP1Q4LDE5 3571 aa2.19□□□□□ -2.06
COPS3-205ENST00000463097 AKAP9Q99996 3911 aa2.19□□□□□ -2.06
COPS3-205ENST00000463097 RELNP78509 3460 aa2.19□□□□□ -2.06
COPS3-205ENST00000463097 SPG11Q96JI7 2443 aa2.18□□□□□ -2.06
COPS3-205ENST00000463097 ZFYVE26Q68DK2 2539 aa2.18□□□□□ -2.06
COPS3-205ENST00000463097 K7EIL1 84 aa2.18□□□□□ -2.06
COPS3-205ENST00000463097 DNAH1Q9P2D7 4330 aa2.18□□□□□ -2.06
COPS3-205ENST00000463097 ANKRD17O75179 2603 aaKnown RBP2.18□□□□□ -2.06
COPS3-205ENST00000463097 FLNCQ14315 2725 aa2.18□□□□□ -2.06
COPS3-205ENST00000463097 OTOGQ6ZRI0 2925 aa2.18□□□□□ -2.06
COPS3-205ENST00000463097 RIF1Q5UIP0 2472 aaKnown RBP2.17□□□□□ -2.06
COPS3-205ENST00000463097 UBR5O95071 2799 aaPredicted RBP2.17□□□□□ -2.06
COPS3-205ENST00000463097 LAMA5O15230 3695 aa2.17□□□□□ -2.06
COPS3-205ENST00000463097 FBN2P35556 2912 aa2.17□□□□□ -2.06
COPS3-205ENST00000463097 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
COPS3-205ENST00000463097 Q6ZSA8 131 aa2.16□□□□□ -2.06
COPS3-205ENST00000463097 ACACBO00763 2458 aa2.16□□□□□ -2.06
COPS3-205ENST00000463097 FAM208BQ5VWN6 2430 aa2.16□□□□□ -2.06
COPS3-205ENST00000463097 ITPR3Q14573 2671 aa2.15□□□□□ -2.06
COPS3-205ENST00000463097 ANK3Q12955 4377 aaKnown RBP2.15□□□□□ -2.07
COPS3-205ENST00000463097 COX6B2Q6YFQ2 88 aa2.15□□□□□ -2.07
COPS3-205ENST00000463097 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
COPS3-205ENST00000463097 IGF2RP11717 2491 aa2.15□□□□□ -2.07
COPS3-205ENST00000463097 HIVEP1P15822 2718 aa2.14□□□□□ -2.07
COPS3-205ENST00000463097 NUPR2A6NF83 97 aa2.14□□□□□ -2.07
COPS3-205ENST00000463097 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
COPS3-205ENST00000463097 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
COPS3-205ENST00000463097 CENPEQ02224 2701 aa2.14□□□□□ -2.07
COPS3-205ENST00000463097 PTPN13Q12923 2485 aa2.14□□□□□ -2.07
COPS3-205ENST00000463097 TEP1Q99973 2627 aaKnown RBP2.14□□□□□ -2.07
COPS3-205ENST00000463097 ZNF462Q96JM2 2506 aa2.14□□□□□ -2.07
COPS3-205ENST00000463097 VPS13CQ709C8 3753 aa2.13□□□□□ -2.07
COPS3-205ENST00000463097 H0YAA0 97 aa2.13□□□□□ -2.07
COPS3-205ENST00000463097 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
COPS3-205ENST00000463097 USP24Q9UPU5 2620 aa2.13□□□□□ -2.07
COPS3-205ENST00000463097 LRRK2Q5S007 2527 aa2.13□□□□□ -2.07
COPS3-205ENST00000463097 VWFP04275 2813 aa2.11□□□□□ -2.07
COPS3-205ENST00000463097 MYO18BQ8IUG5 2567 aa2.11□□□□□ -2.07
COPS3-205ENST00000463097 SRRM2Q9UQ35 2752 aaKnown RBP2.11□□□□□ -2.07
COPS3-205ENST00000463097 IGSF10Q6WRI0 2623 aa2.11□□□□□ -2.07
COPS3-205ENST00000463097 POLQO75417 2590 aa2.1□□□□□ -2.07
COPS3-205ENST00000463097 SPINK6Q6UWN8 80 aa2.1□□□□□ -2.07
COPS3-205ENST00000463097 APLNQ9ULZ1 77 aa2.1□□□□□ -2.07
COPS3-205ENST00000463097 TENM4Q6N022 2769 aa2.1□□□□□ -2.07
COPS3-205ENST00000463097 HELZ2Q9BYK8 2649 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms