RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 FAM236CP0DP71 79 aa10.2□□□□□ -0.78
MSH5-210ENST00000463094 SMIM6P0DI80 62 aa10.19□□□□□ -0.78
MSH5-210ENST00000463094 NOTCH2NLQ7Z3S9 236 aa10.19□□□□□ -0.78
MSH5-210ENST00000463094 NAA38Q9BRA0 125 aaKnown RBP10.19□□□□□ -0.78
MSH5-210ENST00000463094 NDUFB1O75438 58 aa10.18□□□□□ -0.78
MSH5-210ENST00000463094 CRCT1Q9UGL9 99 aa10.17□□□□□ -0.78
MSH5-210ENST00000463094 RBM12B-AS1Q9P1G2 102 aa10.16□□□□□ -0.78
MSH5-210ENST00000463094 PDE6GP18545 87 aa10.15□□□□□ -0.78
MSH5-210ENST00000463094 Q6ZQT0 140 aa10.15□□□□□ -0.78
MSH5-210ENST00000463094 TSTD3H0UI37 97 aa10.14□□□□□ -0.79
MSH5-210ENST00000463094 A0A1B0GW54 56 aa10.13□□□□□ -0.79
MSH5-210ENST00000463094 LOC110117498A0A087WWA1 95 aa10.11□□□□□ -0.79
MSH5-210ENST00000463094 BATFQ16520 125 aa10.11□□□□□ -0.79
MSH5-210ENST00000463094 C14orf132Q9NPU4 83 aa10.07□□□□□ -0.8
MSH5-210ENST00000463094 MTURNQ8N3F0 131 aa10.06□□□□□ -0.8
MSH5-210ENST00000463094 A8MWP4 228 aa10.04□□□□□ -0.8
MSH5-210ENST00000463094 ZCCHC13Q8WW36 166 aaKnown RBP10.04□□□□□ -0.8
MSH5-210ENST00000463094 FSIP2Q5CZC0 6907 aa10.03□□□□□ -0.8
MSH5-210ENST00000463094 NREPQ16612 68 aa10.02□□□□□ -0.81
MSH5-210ENST00000463094 C8orf17Q9NRJ1 99 aa10.01□□□□□ -0.81
MSH5-210ENST00000463094 FLGP20930 4061 aaPredicted RBP10□□□□□ -0.81
MSH5-210ENST00000463094 HRES1P13985 223 aa10□□□□□ -0.81
MSH5-210ENST00000463094 Q8N9P0 234 aaPredicted RBP9.97□□□□□ -0.81
MSH5-210ENST00000463094 IGKV3D-7A0A0C4DH55 119 aa9.96□□□□□ -0.82
MSH5-210ENST00000463094 SPINK7P58062 85 aa9.96□□□□□ -0.82
MSH5-210ENST00000463094 C9orf118A6NHY6 69 aa9.95□□□□□ -0.82
MSH5-210ENST00000463094 H3BT86 120 aa9.95□□□□□ -0.82
MSH5-210ENST00000463094 Q6ZVQ6 151 aa9.95□□□□□ -0.82
MSH5-210ENST00000463094 MPLKIPQ8TAP9 179 aa9.95□□□□□ -0.82
MSH5-210ENST00000463094 PRR15Q8IV56 129 aa9.93□□□□□ -0.82
MSH5-210ENST00000463094 A0A1W2PPM0 123 aa9.91□□□□□ -0.82
MSH5-210ENST00000463094 KRTAP9-8Q9BYQ0 159 aa9.89□□□□□ -0.83
MSH5-210ENST00000463094 TAX1BP3O14907 124 aa9.86□□□□□ -0.83
MSH5-210ENST00000463094 TMEM254Q8TBM7 123 aa9.86□□□□□ -0.83
MSH5-210ENST00000463094 MRPL34Q9BQ48 92 aaKnown RBP9.86□□□□□ -0.83
MSH5-210ENST00000463094 NDUFS5O43920 106 aa9.85□□□□□ -0.83
MSH5-210ENST00000463094 WFDC13Q8IUB5 93 aa9.84□□□□□ -0.83
MSH5-210ENST00000463094 LOC105371267A0A1B0GV96 52 aa9.83□□□□□ -0.84
MSH5-210ENST00000463094 hDV103S1A0JD37 113 aa9.83□□□□□ -0.84
MSH5-210ENST00000463094 BPY2O14599 106 aa9.83□□□□□ -0.84
MSH5-210ENST00000463094 MMP24-AS1A0A0U1RRL7 71 aa9.82□□□□□ -0.84
MSH5-210ENST00000463094 K7EQZ3 153 aa9.81□□□□□ -0.84
MSH5-210ENST00000463094 SPCS1Q9Y6A9 102 aa9.8□□□□□ -0.84
MSH5-210ENST00000463094 MT2AP02795 61 aa9.78□□□□□ -0.84
MSH5-210ENST00000463094 KRTAP10-10P60014 251 aa9.78□□□□□ -0.84
MSH5-210ENST00000463094 COL5A1-AS1Q5SY13 56 aa9.7□□□□□ -0.86
MSH5-210ENST00000463094 MT1FP04733 61 aa9.69□□□□□ -0.86
MSH5-210ENST00000463094 CASC2Q6XLA1 102 aa9.69□□□□□ -0.86
MSH5-210ENST00000463094 IGKV2D-30A0A075B6S6 120 aa9.67□□□□□ -0.86
MSH5-210ENST00000463094 IGKV2-30P06310 120 aa9.67□□□□□ -0.86
MSH5-210ENST00000463094 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
MSH5-210ENST00000463094 C7orf65Q6ZTY9 151 aa9.65□□□□□ -0.86
MSH5-210ENST00000463094 Q8N9L7 120 aa9.65□□□□□ -0.86
MSH5-210ENST00000463094 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
MSH5-210ENST00000463094 H1FX-AS1Q4G0G2 97 aa9.63□□□□□ -0.87
MSH5-210ENST00000463094 SMCPP49901 116 aaPredicted RBP9.61□□□□□ -0.87
MSH5-210ENST00000463094 K7EP34 96 aa9.59□□□□□ -0.87
MSH5-210ENST00000463094 CXCL6P80162 114 aa9.59□□□□□ -0.87
MSH5-210ENST00000463094 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
MSH5-210ENST00000463094 Q5W150 140 aa9.57□□□□□ -0.88
MSH5-210ENST00000463094 LINC00846Q9NV44 126 aa9.57□□□□□ -0.88
MSH5-210ENST00000463094 GTF2H5Q6ZYL4 71 aa9.55□□□□□ -0.88
MSH5-210ENST00000463094 PRO0461Q9UI25 63 aa9.54□□□□□ -0.88
MSH5-210ENST00000463094 LCE2BO14633 110 aa9.53□□□□□ -0.88
MSH5-210ENST00000463094 USH2AO75445 5202 aa9.48□□□□□ -0.89
MSH5-210ENST00000463094 C4orf26Q17RF5 130 aa9.47□□□□□ -0.89
MSH5-210ENST00000463094 F8W1H4 67 aa9.46□□□□□ -0.9
MSH5-210ENST00000463094 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.44□□□□□ -0.9
MSH5-210ENST00000463094 KRTAP19-1Q8IUB9 90 aa9.43□□□□□ -0.9
MSH5-210ENST00000463094 PCP4L1A6NKN8 68 aa9.42□□□□□ -0.9
MSH5-210ENST00000463094 TP53AIP1Q9HCN2 124 aa9.41□□□□□ -0.9
MSH5-210ENST00000463094 ETDBQ3ZM63 59 aa9.39□□□□□ -0.91
MSH5-210ENST00000463094 SSPOA2VEC9 5147 aa9.37□□□□□ -0.91
MSH5-210ENST00000463094 KRTAP9-7A8MTY7 169 aa9.35□□□□□ -0.91
MSH5-210ENST00000463094 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
MSH5-210ENST00000463094 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
MSH5-210ENST00000463094 S4R3F8 94 aa9.31□□□□□ -0.92
MSH5-210ENST00000463094 FAM236AA0A1B0GUQ0 79 aa9.29□□□□□ -0.92
MSH5-210ENST00000463094 FAM236BA0A1B0GV22 79 aa9.29□□□□□ -0.92
MSH5-210ENST00000463094 ACYP1P07311 99 aa9.26□□□□□ -0.93
MSH5-210ENST00000463094 KRTAP19-6Q3LI70 58 aa9.25□□□□□ -0.93
MSH5-210ENST00000463094 CSAG1Q6PB30 78 aa9.25□□□□□ -0.93
MSH5-210ENST00000463094 FCGBPQ9Y6R7 5405 aaPredicted RBP9.22□□□□□ -0.93
MSH5-210ENST00000463094 ATP5EP2Q5VTU8 51 aa9.19□□□□□ -0.94
MSH5-210ENST00000463094 KRTAP3-1Q9BYR8 98 aa9.19□□□□□ -0.94
MSH5-210ENST00000463094 TRAV22A0A0B4J277 110 aa9.18□□□□□ -0.94
MSH5-210ENST00000463094 LCA10Q71F78 164 aa9.18□□□□□ -0.94
MSH5-210ENST00000463094 HIST1H4AP62805 103 aaKnown RBP9.17□□□□□ -0.94
MSH5-210ENST00000463094 CYP4F30PQ9H0H9 118 aa9.16□□□□□ -0.94
MSH5-210ENST00000463094 LOC101927531A0A1B0GV80 90 aa9.15□□□□□ -0.94
MSH5-210ENST00000463094 FAM240AA0A1B0GVK7 77 aa9.15□□□□□ -0.94
MSH5-210ENST00000463094 ATOX1O00244 68 aa9.08□□□□□ -0.96
MSH5-210ENST00000463094 UQCRQO14949 82 aa9.08□□□□□ -0.96
MSH5-210ENST00000463094 H0Y9P7 68 aa9.04□□□□□ -0.96
MSH5-210ENST00000463094 Q5VV11 94 aa9.02□□□□□ -0.97
MSH5-210ENST00000463094 LINC00643Q86TS7 51 aa9□□□□□ -0.97
MSH5-210ENST00000463094 KLKP1Q107X0 134 aa8.99□□□□□ -0.97
MSH5-210ENST00000463094 NDUFC1O43677 76 aa8.96□□□□□ -0.98
MSH5-210ENST00000463094 MACF1Q9UPN3 7388 aaKnown RBP8.95□□□□□ -0.98
MSH5-210ENST00000463094 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms