RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 HIVEP2P31629 2446 aa2.12□□□□□ -2.07
SGCE-209ENST00000462731 ITPR1Q14643 2758 aa2.12□□□□□ -2.07
SGCE-209ENST00000462731 DSPP15924 2871 aaKnown RBP2.12□□□□□ -2.07
SGCE-209ENST00000462731 ATRQ13535 2644 aa2.11□□□□□ -2.07
SGCE-209ENST00000462731 FRYLO94915 3013 aa2.11□□□□□ -2.07
SGCE-209ENST00000462731 BOD1L1Q8NFC6 3051 aa2.11□□□□□ -2.07
SGCE-209ENST00000462731 NOTCH1P46531 2555 aa2.1□□□□□ -2.07
SGCE-209ENST00000462731 WFDC13Q8IUB5 93 aa2.1□□□□□ -2.07
SGCE-209ENST00000462731 EPPK1P58107 5090 aaKnown RBP2.1□□□□□ -2.07
SGCE-209ENST00000462731 CCDC168Q8NDH2 2452 aa2.1□□□□□ -2.07
SGCE-209ENST00000462731 NBEAL1Q6ZS30 2694 aa2.09□□□□□ -2.07
SGCE-209ENST00000462731 USF3Q68DE3 2245 aa2.09□□□□□ -2.07
SGCE-209ENST00000462731 C6orf48Q9UBA6 75 aa2.09□□□□□ -2.07
SGCE-209ENST00000462731 STAB1Q9NY15 2570 aa2.09□□□□□ -2.07
SGCE-209ENST00000462731 HYDINQ4G0P3 5121 aa2.09□□□□□ -2.08
SGCE-209ENST00000462731 COL12A1Q99715 3063 aa2.09□□□□□ -2.08
SGCE-209ENST00000462731 NF1P21359 2839 aa2.09□□□□□ -2.08
SGCE-209ENST00000462731 SPENQ96T58 3664 aaKnown RBP2.09□□□□□ -2.08
SGCE-209ENST00000462731 KMT2CQ8NEZ4 4911 aaKnown RBP2.08□□□□□ -2.08
SGCE-209ENST00000462731 SNRPGP62308 76 aaKnown RBP2.08□□□□□ -2.08
SGCE-209ENST00000462731 CSMD1Q96PZ7 3565 aa2.08□□□□□ -2.08
SGCE-209ENST00000462731 CHD7Q9P2D1 2997 aa2.07□□□□□ -2.08
SGCE-209ENST00000462731 MTORP42345 2549 aa2.07□□□□□ -2.08
SGCE-209ENST00000462731 F8P00451 2351 aa2.06□□□□□ -2.08
SGCE-209ENST00000462731 SMIM2Q9BVW6 85 aa2.05□□□□□ -2.08
SGCE-209ENST00000462731 FLNAP21333 2647 aaKnown RBP2.05□□□□□ -2.08
SGCE-209ENST00000462731 NBEAL2Q6ZNJ1 2754 aa2.05□□□□□ -2.08
SGCE-209ENST00000462731 IAPPP10997 89 aa2.04□□□□□ -2.08
SGCE-209ENST00000462731 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
SGCE-209ENST00000462731 CHD9Q3L8U1 2897 aa2.04□□□□□ -2.08
SGCE-209ENST00000462731 FLNCQ14315 2725 aa2.03□□□□□ -2.08
SGCE-209ENST00000462731 DEFB130BP0DP73 79 aa2.03□□□□□ -2.08
SGCE-209ENST00000462731 DEFB130AP0DP74 79 aa2.03□□□□□ -2.08
SGCE-209ENST00000462731 HIVEP3Q5T1R4 2406 aa2.03□□□□□ -2.08
SGCE-209ENST00000462731 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
SGCE-209ENST00000462731 RYR2Q92736 4967 aa2.03□□□□□ -2.08
SGCE-209ENST00000462731 USP9YO00507 2555 aaPredicted RBP2.03□□□□□ -2.09
SGCE-209ENST00000462731 DMXL2Q8TDJ6 3036 aa2.02□□□□□ -2.09
SGCE-209ENST00000462731 PKD1L1Q8TDX9 2849 aa2.02□□□□□ -2.09
SGCE-209ENST00000462731 ITPR2Q14571 2701 aa2.02□□□□□ -2.09
SGCE-209ENST00000462731 TFF3Q07654 80 aa2.01□□□□□ -2.09
SGCE-209ENST00000462731 ALMS1Q8TCU4 4167 aa2.01□□□□□ -2.09
SGCE-209ENST00000462731 PDZD2O15018 2839 aa2□□□□□ -2.09
SGCE-209ENST00000462731 RPS27P42677 84 aaKnown RBP2□□□□□ -2.09
SGCE-209ENST00000462731 RPS27LQ71UM5 84 aaKnown RBP2□□□□□ -2.09
SGCE-209ENST00000462731 AKAP13Q12802 2813 aa1.99□□□□□ -2.09
SGCE-209ENST00000462731 ANKHD1Q8IWZ3 2542 aaKnown RBP1.99□□□□□ -2.09
SGCE-209ENST00000462731 LRBAP50851 2863 aa1.99□□□□□ -2.09
SGCE-209ENST00000462731 WNK2Q9Y3S1 2297 aa1.99□□□□□ -2.09
SGCE-209ENST00000462731 CELSR1Q9NYQ6 3014 aa1.99□□□□□ -2.09
SGCE-209ENST00000462731 KLK9Q2XQG4 91 aa1.98□□□□□ -2.09
SGCE-209ENST00000462731 CRYBG3Q68DQ2 2970 aa1.98□□□□□ -2.09
SGCE-209ENST00000462731 AKAP9Q99996 3911 aa1.98□□□□□ -2.09
SGCE-209ENST00000462731 TLN2Q9Y4G6 2542 aa1.97□□□□□ -2.09
SGCE-209ENST00000462731 SPTBN1Q01082 2364 aaKnown RBP1.97□□□□□ -2.09
SGCE-209ENST00000462731 COL6A5A8TX70 2615 aa1.97□□□□□ -2.09
SGCE-209ENST00000462731 HERC2O95714 4834 aa1.96□□□□□ -2.1
SGCE-209ENST00000462731 CUBNO60494 3623 aa1.96□□□□□ -2.1
SGCE-209ENST00000462731 ADGRG4Q8IZF6 3080 aa1.96□□□□□ -2.1
SGCE-209ENST00000462731 NDUFA1O15239 70 aa1.96□□□□□ -2.1
SGCE-209ENST00000462731 CELSR2Q9HCU4 2923 aa1.95□□□□□ -2.1
SGCE-209ENST00000462731 TGP01266 2768 aa1.95□□□□□ -2.1
SGCE-209ENST00000462731 OTOGQ6ZRI0 2925 aa1.94□□□□□ -2.1
SGCE-209ENST00000462731 UTP20O75691 2785 aaKnown RBP1.94□□□□□ -2.1
SGCE-209ENST00000462731 VWFP04275 2813 aa1.94□□□□□ -2.1
SGCE-209ENST00000462731 PKDREJQ9NTG1 2253 aa1.94□□□□□ -2.1
SGCE-209ENST00000462731 MEGF8Q7Z7M0 2845 aa1.94□□□□□ -2.1
SGCE-209ENST00000462731 CENPEQ02224 2701 aa1.93□□□□□ -2.1
SGCE-209ENST00000462731 ACACAQ13085 2346 aa1.93□□□□□ -2.1
SGCE-209ENST00000462731 HIVEP1P15822 2718 aa1.93□□□□□ -2.1
SGCE-209ENST00000462731 WT1-ASQ06250 92 aa1.92□□□□□ -2.1
SGCE-209ENST00000462731 CSMD2Q7Z408 3487 aa1.92□□□□□ -2.1
SGCE-209ENST00000462731 DUOX1Q9NRD9 1551 aa1.91□□□□□ -2.1
SGCE-209ENST00000462731 ANK2Q01484 3957 aa1.91□□□□□ -2.1
SGCE-209ENST00000462731 APC2O95996 2303 aa1.91□□□□□ -2.1
SGCE-209ENST00000462731 LAMA1P25391 3075 aa1.91□□□□□ -2.1
SGCE-209ENST00000462731 NBASA2RRP1 2371 aa1.91□□□□□ -2.1
SGCE-209ENST00000462731 MGAQ8IWI9 3026 aa1.91□□□□□ -2.1
SGCE-209ENST00000462731 ATMQ13315 3056 aa1.9□□□□□ -2.1
SGCE-209ENST00000462731 CSPG4Q6UVK1 2322 aa1.9□□□□□ -2.1
SGCE-209ENST00000462731 PRKDCP78527 4128 aaKnown RBP1.9□□□□□ -2.11
SGCE-209ENST00000462731 BSNQ9UPA5 3926 aa1.9□□□□□ -2.11
SGCE-209ENST00000462731 NIPBLQ6KC79 2804 aaeCLIP1.9□□□□□ -2.11
SGCE-209ENST00000462731 VPS13CQ709C8 3753 aa1.89□□□□□ -2.11
SGCE-209ENST00000462731 ABCA13Q86UQ4 5058 aa1.88□□□□□ -2.11
SGCE-209ENST00000462731 ACANP16112 2415 aa1.87□□□□□ -2.11
SGCE-209ENST00000462731 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
SGCE-209ENST00000462731 MGAM2Q2M2H8 2515 aa1.87□□□□□ -2.11
SGCE-209ENST00000462731 ZNF469Q96JG9 3925 aaPredicted RBP1.86□□□□□ -2.11
SGCE-209ENST00000462731 MUC2Q02817 5179 aa1.86□□□□□ -2.11
SGCE-209ENST00000462731 H3BUA1 57 aa1.86□□□□□ -2.11
SGCE-209ENST00000462731 WNK1Q9H4A3 2382 aa1.85□□□□□ -2.11
SGCE-209ENST00000462731 HERC1Q15751 4861 aa1.85□□□□□ -2.11
SGCE-209ENST00000462731 APCP25054 2843 aa1.85□□□□□ -2.11
SGCE-209ENST00000462731 TENM1Q9UKZ4 2725 aa1.85□□□□□ -2.11
SGCE-209ENST00000462731 SACSQ9NZJ4 4579 aa1.84□□□□□ -2.11
SGCE-209ENST00000462731 DCHS2Q6V1P9 2916 aa1.84□□□□□ -2.11
SGCE-209ENST00000462731 DYNC2H1Q8NCM8 4307 aaKnown RBP1.83□□□□□ -2.12
SGCE-209ENST00000462731 KNL1Q8NG31 2342 aa1.83□□□□□ -2.12
SGCE-209ENST00000462731 SVEP1Q4LDE5 3571 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms