RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 MUC17Q685J3 4493 aa6.44□□□□□ -1.38
CPNE1-221ENST00000462352 ETDBQ3ZM63 59 aa6.44□□□□□ -1.38
CPNE1-221ENST00000462352 NREPQ16612 68 aa6.41□□□□□ -1.38
CPNE1-221ENST00000462352 J3KT08 172 aa6.4□□□□□ -1.38
CPNE1-221ENST00000462352 DSCR10P59022 87 aa6.38□□□□□ -1.39
CPNE1-221ENST00000462352 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
CPNE1-221ENST00000462352 IGHV6-1A0A0B4J1U7 121 aa6.36□□□□□ -1.39
CPNE1-221ENST00000462352 A0A1B0GVX0 72 aa6.36□□□□□ -1.39
CPNE1-221ENST00000462352 LINC00313P59037 77 aa6.36□□□□□ -1.39
CPNE1-221ENST00000462352 MUC2Q02817 5179 aa6.36□□□□□ -1.39
CPNE1-221ENST00000462352 RPL37P61927 97 aaKnown RBP6.35□□□□□ -1.39
CPNE1-221ENST00000462352 Q6ZVQ6 151 aa6.35□□□□□ -1.39
CPNE1-221ENST00000462352 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
CPNE1-221ENST00000462352 A8MWP4 228 aa6.34□□□□□ -1.39
CPNE1-221ENST00000462352 NDUFB1O75438 58 aa6.34□□□□□ -1.39
CPNE1-221ENST00000462352 LINC00846Q9NV44 126 aa6.34□□□□□ -1.39
CPNE1-221ENST00000462352 IGKV3D-7A0A0C4DH55 119 aa6.32□□□□□ -1.4
CPNE1-221ENST00000462352 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
CPNE1-221ENST00000462352 PCOTHQ58A44 107 aa6.32□□□□□ -1.4
CPNE1-221ENST00000462352 Q75L30 129 aa6.32□□□□□ -1.4
CPNE1-221ENST00000462352 UBL5Q9BZL1 73 aa6.32□□□□□ -1.4
CPNE1-221ENST00000462352 KRTAP16-1A8MUX0 517 aa6.31□□□□□ -1.4
CPNE1-221ENST00000462352 BPY2O14599 106 aa6.31□□□□□ -1.4
CPNE1-221ENST00000462352 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
CPNE1-221ENST00000462352 A8MUU9 505 aa6.3□□□□□ -1.4
CPNE1-221ENST00000462352 PRR15Q8IV56 129 aa6.3□□□□□ -1.4
CPNE1-221ENST00000462352 K7EQZ3 153 aa6.29□□□□□ -1.4
CPNE1-221ENST00000462352 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
CPNE1-221ENST00000462352 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
CPNE1-221ENST00000462352 ACYP1P07311 99 aa6.27□□□□□ -1.41
CPNE1-221ENST00000462352 ATP11AUNQ6ZP68 121 aa6.27□□□□□ -1.41
CPNE1-221ENST00000462352 FAM240AA0A1B0GVK7 77 aa6.26□□□□□ -1.41
CPNE1-221ENST00000462352 J3QR89 54 aa6.25□□□□□ -1.41
CPNE1-221ENST00000462352 MMP24-AS1A0A0U1RRL7 71 aa6.24□□□□□ -1.41
CPNE1-221ENST00000462352 Q8N9L7 120 aa6.24□□□□□ -1.41
CPNE1-221ENST00000462352 K7ERU9 68 aa6.22□□□□□ -1.41
CPNE1-221ENST00000462352 Q8N9P0 234 aaPredicted RBP6.21□□□□□ -1.42
CPNE1-221ENST00000462352 TMEM254Q8TBM7 123 aa6.21□□□□□ -1.42
CPNE1-221ENST00000462352 hDV103S1A0JD37 113 aa6.2□□□□□ -1.42
CPNE1-221ENST00000462352 CXCL6P80162 114 aa6.2□□□□□ -1.42
CPNE1-221ENST00000462352 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
CPNE1-221ENST00000462352 WFDC13Q8IUB5 93 aa6.17□□□□□ -1.42
CPNE1-221ENST00000462352 A0A0U1RQV1 116 aa6.16□□□□□ -1.42
CPNE1-221ENST00000462352 CASC2Q6XLA1 102 aa6.16□□□□□ -1.42
CPNE1-221ENST00000462352 ZCCHC13Q8WW36 166 aaKnown RBP6.15□□□□□ -1.42
CPNE1-221ENST00000462352 FAT4Q6V0I7 4981 aa6.14□□□□□ -1.43
CPNE1-221ENST00000462352 HCG22E2RYF7 251 aa6.14□□□□□ -1.43
CPNE1-221ENST00000462352 ATP5EP2Q5VTU8 51 aa6.14□□□□□ -1.43
CPNE1-221ENST00000462352 LINC00643Q86TS7 51 aa6.14□□□□□ -1.43
CPNE1-221ENST00000462352 NDUFS5O43920 106 aa6.13□□□□□ -1.43
CPNE1-221ENST00000462352 KRTAP19-2Q3LHN2 52 aa6.09□□□□□ -1.43
CPNE1-221ENST00000462352 HIST1H4AP62805 103 aaKnown RBP6.08□□□□□ -1.44
CPNE1-221ENST00000462352 Q5W150 140 aa6.05□□□□□ -1.44
CPNE1-221ENST00000462352 SPINK7P58062 85 aa6.04□□□□□ -1.44
CPNE1-221ENST00000462352 A0A087WVE0 104 aa6.03□□□□□ -1.44
CPNE1-221ENST00000462352 HRES1P13985 223 aa6.03□□□□□ -1.44
CPNE1-221ENST00000462352 COX6B2Q6YFQ2 88 aa6.02□□□□□ -1.45
CPNE1-221ENST00000462352 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
CPNE1-221ENST00000462352 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
CPNE1-221ENST00000462352 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
CPNE1-221ENST00000462352 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
CPNE1-221ENST00000462352 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
CPNE1-221ENST00000462352 RBM12B-AS1Q9P1G2 102 aa5.97□□□□□ -1.45
CPNE1-221ENST00000462352 MT1HP80294 61 aa5.96□□□□□ -1.46
CPNE1-221ENST00000462352 C7orf65Q6ZTY9 151 aa5.96□□□□□ -1.46
CPNE1-221ENST00000462352 IMUPQ9GZP8 106 aa5.96□□□□□ -1.46
CPNE1-221ENST00000462352 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
CPNE1-221ENST00000462352 FAM236DA0A1B0GTK5 79 aa5.94□□□□□ -1.46
CPNE1-221ENST00000462352 FAM236CP0DP71 79 aa5.94□□□□□ -1.46
CPNE1-221ENST00000462352 TRAV22A0A0B4J277 110 aa5.91□□□□□ -1.46
CPNE1-221ENST00000462352 UQCRQO14949 82 aa5.91□□□□□ -1.46
CPNE1-221ENST00000462352 OCR1Q9BZK8 76 aa5.88□□□□□ -1.47
CPNE1-221ENST00000462352 M0R2T5 61 aa5.87□□□□□ -1.47
CPNE1-221ENST00000462352 SCGB1A1P11684 91 aa5.87□□□□□ -1.47
CPNE1-221ENST00000462352 FAM236AA0A1B0GUQ0 79 aa5.86□□□□□ -1.47
CPNE1-221ENST00000462352 FAM236BA0A1B0GV22 79 aa5.86□□□□□ -1.47
CPNE1-221ENST00000462352 LOC101927531A0A1B0GV80 90 aa5.86□□□□□ -1.47
CPNE1-221ENST00000462352 H0Y9P7 68 aa5.86□□□□□ -1.47
CPNE1-221ENST00000462352 ATOX1O00244 68 aa5.85□□□□□ -1.47
CPNE1-221ENST00000462352 C4orf26Q17RF5 130 aa5.84□□□□□ -1.47
CPNE1-221ENST00000462352 CYP4F30PQ9H0H9 118 aa5.84□□□□□ -1.47
CPNE1-221ENST00000462352 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
CPNE1-221ENST00000462352 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
CPNE1-221ENST00000462352 H3BS24 57 aa5.82□□□□□ -1.48
CPNE1-221ENST00000462352 MP68P56378 58 aa5.8□□□□□ -1.48
CPNE1-221ENST00000462352 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
CPNE1-221ENST00000462352 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
CPNE1-221ENST00000462352 C5orf47Q569G3 176 aa5.8□□□□□ -1.48
CPNE1-221ENST00000462352 C1orf64Q8NEQ6 169 aa5.8□□□□□ -1.48
CPNE1-221ENST00000462352 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
CPNE1-221ENST00000462352 SMIM20Q8N5G0 67 aa5.78□□□□□ -1.48
CPNE1-221ENST00000462352 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
CPNE1-221ENST00000462352 TRAV7A0A075B6U4 112 aa5.76□□□□□ -1.49
CPNE1-221ENST00000462352 H3BPC8 53 aa5.75□□□□□ -1.49
CPNE1-221ENST00000462352 KLKP1Q107X0 134 aa5.73□□□□□ -1.49
CPNE1-221ENST00000462352 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
CPNE1-221ENST00000462352 ANAPC13Q9BS18 74 aa5.7□□□□□ -1.5
CPNE1-221ENST00000462352 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
CPNE1-221ENST00000462352 S4R3F8 94 aa5.67□□□□□ -1.5
CPNE1-221ENST00000462352 MT2AP02795 61 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms