RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 BCE1O60756 84 aa2.74□□□□□ -1.97
CSMD3-205ENST00000462254 ERC2-IT1O76042 136 aa2.74□□□□□ -1.97
CSMD3-205ENST00000462254 COX6CP09669 75 aa2.74□□□□□ -1.97
CSMD3-205ENST00000462254 KRTAP10-4P60372 401 aaPredicted RBP2.74□□□□□ -1.97
CSMD3-205ENST00000462254 C1orf137Q5JT78 98 aa2.74□□□□□ -1.97
CSMD3-205ENST00000462254 HRCT1Q6UXD1 115 aa2.74□□□□□ -1.97
CSMD3-205ENST00000462254 LINC00575Q6W349 94 aa2.74□□□□□ -1.97
CSMD3-205ENST00000462254 SMCR5Q8TEV8 140 aa2.74□□□□□ -1.97
CSMD3-205ENST00000462254 PPDPFLQ8WWR9 84 aa2.74□□□□□ -1.97
CSMD3-205ENST00000462254 hADV29S1A0JD25 119 aa2.73□□□□□ -1.97
CSMD3-205ENST00000462254 H3BQ85 93 aa2.73□□□□□ -1.97
CSMD3-205ENST00000462254 RPL37AP61513 92 aaKnown RBP2.73□□□□□ -1.97
CSMD3-205ENST00000462254 LINC01554Q52M75 96 aa2.73□□□□□ -1.97
CSMD3-205ENST00000462254 HIGD2AQ9BW72 106 aa2.73□□□□□ -1.97
CSMD3-205ENST00000462254 HSPG2P98160 4391 aa2.72□□□□□ -1.97
CSMD3-205ENST00000462254 RYR1P21817 5038 aa2.72□□□□□ -1.97
CSMD3-205ENST00000462254 VPS13BQ7Z7G8 4022 aa2.72□□□□□ -1.97
CSMD3-205ENST00000462254 C9JAW5 83 aa2.72□□□□□ -1.97
CSMD3-205ENST00000462254 SNCGO76070 127 aa2.72□□□□□ -1.97
CSMD3-205ENST00000462254 TRACP01848 142 aa2.72□□□□□ -1.97
CSMD3-205ENST00000462254 ATXN8Q156A1 80 aa2.72□□□□□ -1.97
CSMD3-205ENST00000462254 Q6ZQY7 126 aa2.72□□□□□ -1.97
CSMD3-205ENST00000462254 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
CSMD3-205ENST00000462254 SRRM2Q9UQ35 2752 aaKnown RBP2.71□□□□□ -1.98
CSMD3-205ENST00000462254 Q5VSD8 79 aa2.71□□□□□ -1.98
CSMD3-205ENST00000462254 KIAA1109Q2LD37 5005 aa2.71□□□□□ -1.98
CSMD3-205ENST00000462254 IGLV5-48A0A075B6I7 105 aa2.7□□□□□ -1.98
CSMD3-205ENST00000462254 DNAL4O96015 105 aa2.7□□□□□ -1.98
CSMD3-205ENST00000462254 ACYP1P07311 99 aa2.7□□□□□ -1.98
CSMD3-205ENST00000462254 ETDBQ3ZM63 59 aa2.7□□□□□ -1.98
CSMD3-205ENST00000462254 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.7□□□□□ -1.98
CSMD3-205ENST00000462254 TEN1Q86WV5 123 aa2.7□□□□□ -1.98
CSMD3-205ENST00000462254 PRO0461Q9UI25 63 aa2.7□□□□□ -1.98
CSMD3-205ENST00000462254 FAT1Q14517 4588 aa2.69□□□□□ -1.98
CSMD3-205ENST00000462254 DEFB105AQ8NG35 78 aa2.69□□□□□ -1.98
CSMD3-205ENST00000462254 SPRR4Q96PI1 79 aa2.69□□□□□ -1.98
CSMD3-205ENST00000462254 ORMDL1Q9P0S3 153 aa2.69□□□□□ -1.98
CSMD3-205ENST00000462254 BIRC6Q9NR09 4857 aa2.69□□□□□ -1.98
CSMD3-205ENST00000462254 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 H3BT86 120 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 TMEM256-PLSCR3K7ERE1 68 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 KRTAP1-4P0C5Y4 121 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 BAALC-AS2P0C853 105 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 SPRR1BP22528 89 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 Q5XG85 94 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 SPINK6Q6UWN8 80 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 LINC01600Q96MT4 127 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 ANAPC11Q9NYG5 84 aa2.68□□□□□ -1.98
CSMD3-205ENST00000462254 TEX49A0A1B0GTD5 131 aa2.67□□□□□ -1.98
CSMD3-205ENST00000462254 FAM229BQ4G0N7 80 aa2.67□□□□□ -1.98
CSMD3-205ENST00000462254 LINC00483Q53H64 154 aa2.67□□□□□ -1.98
CSMD3-205ENST00000462254 A0A1B0GU33 70 aa2.66□□□□□ -1.98
CSMD3-205ENST00000462254 H3BPC8 53 aa2.66□□□□□ -1.98
CSMD3-205ENST00000462254 KRTAP13-2Q52LG2 175 aa2.66□□□□□ -1.98
CSMD3-205ENST00000462254 A0A0G2JQZ4 141 aa2.65□□□□□ -1.99
CSMD3-205ENST00000462254 MT-ATP8P03928 68 aa2.65□□□□□ -1.99
CSMD3-205ENST00000462254 OBSCN-AS1Q96MR7 158 aa2.65□□□□□ -1.99
CSMD3-205ENST00000462254 TRBV7-4A0A0J9YYF1 115 aa2.64□□□□□ -1.99
CSMD3-205ENST00000462254 UQCRQO14949 82 aa2.64□□□□□ -1.99
CSMD3-205ENST00000462254 MOBPQ13875 183 aa2.64□□□□□ -1.99
CSMD3-205ENST00000462254 IGFL1Q6UW32 110 aa2.64□□□□□ -1.99
CSMD3-205ENST00000462254 C1orf64Q8NEQ6 169 aa2.64□□□□□ -1.99
CSMD3-205ENST00000462254 C14orf132Q9NPU4 83 aa2.64□□□□□ -1.99
CSMD3-205ENST00000462254 HERC2O95714 4834 aa2.63□□□□□ -1.99
CSMD3-205ENST00000462254 FLG2Q5D862 2391 aaPredicted RBP2.63□□□□□ -1.99
CSMD3-205ENST00000462254 F8WEM9 126 aa2.63□□□□□ -1.99
CSMD3-205ENST00000462254 JMJD7-PLA2G4BH0Y9G9 81 aa2.63□□□□□ -1.99
CSMD3-205ENST00000462254 C9orf153Q5TBE3 101 aa2.63□□□□□ -1.99
CSMD3-205ENST00000462254 SPINT4Q6UDR6 99 aa2.63□□□□□ -1.99
CSMD3-205ENST00000462254 TRBV7-7A0A0K0K1E9 115 aa2.62□□□□□ -1.99
CSMD3-205ENST00000462254 A0A1W2PNM2 257 aa2.62□□□□□ -1.99
CSMD3-205ENST00000462254 ATOX1O00244 68 aa2.62□□□□□ -1.99
CSMD3-205ENST00000462254 CRYGAP11844 174 aa2.62□□□□□ -1.99
CSMD3-205ENST00000462254 RBM3P98179 157 aaKnown RBP2.62□□□□□ -1.99
CSMD3-205ENST00000462254 Q6ZQT0 140 aa2.62□□□□□ -1.99
CSMD3-205ENST00000462254 LINC00643Q86TS7 51 aa2.62□□□□□ -1.99
CSMD3-205ENST00000462254 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
CSMD3-205ENST00000462254 LRP1Q07954 4544 aaKnown RBP2.62□□□□□ -1.99
CSMD3-205ENST00000462254 LOC110117498A0A087WWA1 95 aa2.61□□□□□ -1.99
CSMD3-205ENST00000462254 Q6JHZ5 121 aa2.61□□□□□ -1.99
CSMD3-205ENST00000462254 SSBP3-AS1Q7Z2R9 100 aa2.61□□□□□ -1.99
CSMD3-205ENST00000462254 DSCR8Q96T75 97 aa2.61□□□□□ -1.99
CSMD3-205ENST00000462254 TRAV7A0A075B6U4 112 aa2.6□□□□□ -1.99
CSMD3-205ENST00000462254 CCKP06307 115 aa2.6□□□□□ -1.99
CSMD3-205ENST00000462254 MT1HL1P0DM35 61 aa2.6□□□□□ -1.99
CSMD3-205ENST00000462254 KRTAP10-8P60410 259 aa2.6□□□□□ -1.99
CSMD3-205ENST00000462254 TMEM258P61165 79 aa2.6□□□□□ -1.99
CSMD3-205ENST00000462254 KRTAP25-1Q3LHN0 102 aa2.6□□□□□ -1.99
CSMD3-205ENST00000462254 Q8N9L7 120 aa2.6□□□□□ -1.99
CSMD3-205ENST00000462254 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
CSMD3-205ENST00000462254 CCDC179H3BU77 68 aa2.59□□□□□ -1.99
CSMD3-205ENST00000462254 ABCA13Q86UQ4 5058 aa2.58□□□□□ -2
CSMD3-205ENST00000462254 TNXBP22105 4242 aa2.58□□□□□ -2
CSMD3-205ENST00000462254 A0A087WSZ3 146 aa2.58□□□□□ -2
CSMD3-205ENST00000462254 COX7CP15954 63 aa2.58□□□□□ -2
CSMD3-205ENST00000462254 PDE6GP18545 87 aa2.58□□□□□ -2
CSMD3-205ENST00000462254 LINC00304Q8N9R0 145 aa2.58□□□□□ -2
CSMD3-205ENST00000462254 MYCBP2O75592 4640 aa2.58□□□□□ -2
CSMD3-205ENST00000462254 ATP5EP2Q5VTU8 51 aa2.57□□□□□ -2
CSMD3-205ENST00000462254 C7orf65Q6ZTY9 151 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms