RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 LINC00313P59037 77 aa2.41□□□□□ -2.02
ATP13A3-206ENST00000461660 FLG2Q5D862 2391 aaPredicted RBP2.41□□□□□ -2.02
ATP13A3-206ENST00000461660 KRTAP1-4P0C5Y4 121 aa2.41□□□□□ -2.02
ATP13A3-206ENST00000461660 TMEM254Q8TBM7 123 aa2.41□□□□□ -2.02
ATP13A3-206ENST00000461660 KMT2CQ8NEZ4 4911 aaKnown RBP2.4□□□□□ -2.02
ATP13A3-206ENST00000461660 NDUFC1O43677 76 aa2.4□□□□□ -2.02
ATP13A3-206ENST00000461660 C5orf47Q569G3 176 aa2.4□□□□□ -2.02
ATP13A3-206ENST00000461660 LINC00208Q96KT6 92 aa2.4□□□□□ -2.02
ATP13A3-206ENST00000461660 MRPL34Q9BQ48 92 aaKnown RBP2.4□□□□□ -2.02
ATP13A3-206ENST00000461660 TP53AIP1Q9HCN2 124 aa2.4□□□□□ -2.02
ATP13A3-206ENST00000461660 H0Y9P7 68 aa2.4□□□□□ -2.03
ATP13A3-206ENST00000461660 DMBT1Q9UGM3 2413 aaPredicted RBP2.4□□□□□ -2.03
ATP13A3-206ENST00000461660 DYNC2H1Q8NCM8 4307 aaKnown RBP2.39□□□□□ -2.03
ATP13A3-206ENST00000461660 SEC61GP60059 68 aa2.39□□□□□ -2.03
ATP13A3-206ENST00000461660 C1orf195Q5TG92 126 aa2.39□□□□□ -2.03
ATP13A3-206ENST00000461660 DNAH1Q9P2D7 4330 aa2.39□□□□□ -2.03
ATP13A3-206ENST00000461660 MMP24-AS1A0A0U1RRL7 71 aa2.39□□□□□ -2.03
ATP13A3-206ENST00000461660 ASB16-AS1Q495Z4 193 aa2.39□□□□□ -2.03
ATP13A3-206ENST00000461660 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
ATP13A3-206ENST00000461660 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
ATP13A3-206ENST00000461660 CSMD3Q7Z407 3707 aa2.38□□□□□ -2.03
ATP13A3-206ENST00000461660 TRAV22A0A0B4J277 110 aa2.38□□□□□ -2.03
ATP13A3-206ENST00000461660 RYR3Q15413 4870 aa2.38□□□□□ -2.03
ATP13A3-206ENST00000461660 SRRM2Q9UQ35 2752 aaKnown RBP2.38□□□□□ -2.03
ATP13A3-206ENST00000461660 TMEM258P61165 79 aa2.38□□□□□ -2.03
ATP13A3-206ENST00000461660 Q5XG85 94 aa2.38□□□□□ -2.03
ATP13A3-206ENST00000461660 Q96NJ1 140 aa2.38□□□□□ -2.03
ATP13A3-206ENST00000461660 OCR1Q9BZK8 76 aa2.38□□□□□ -2.03
ATP13A3-206ENST00000461660 Q8N1X5 172 aa2.38□□□□□ -2.03
ATP13A3-206ENST00000461660 FAM236DA0A1B0GTK5 79 aa2.37□□□□□ -2.03
ATP13A3-206ENST00000461660 FAM236CP0DP71 79 aa2.37□□□□□ -2.03
ATP13A3-206ENST00000461660 RPS29P62273 56 aaKnown RBP2.37□□□□□ -2.03
ATP13A3-206ENST00000461660 C1orf64Q8NEQ6 169 aa2.37□□□□□ -2.03
ATP13A3-206ENST00000461660 DNAH10Q8IVF4 4471 aa2.37□□□□□ -2.03
ATP13A3-206ENST00000461660 H3BPC8 53 aa2.37□□□□□ -2.03
ATP13A3-206ENST00000461660 RETNLBQ9BQ08 111 aa2.37□□□□□ -2.03
ATP13A3-206ENST00000461660 PRR4Q16378 134 aa2.36□□□□□ -2.03
ATP13A3-206ENST00000461660 DNAH7Q8WXX0 4024 aa2.36□□□□□ -2.03
ATP13A3-206ENST00000461660 C9orf92A6NGG3 77 aa2.36□□□□□ -2.03
ATP13A3-206ENST00000461660 KRTAP29-1A8MX34 341 aaPredicted RBP2.36□□□□□ -2.03
ATP13A3-206ENST00000461660 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
ATP13A3-206ENST00000461660 KLKP1Q107X0 134 aa2.35□□□□□ -2.03
ATP13A3-206ENST00000461660 DNAH17Q9UFH2 4485 aa2.35□□□□□ -2.03
ATP13A3-206ENST00000461660 PCOTHQ58A44 107 aa2.35□□□□□ -2.03
ATP13A3-206ENST00000461660 IGKV2D-30A0A075B6S6 120 aa2.34□□□□□ -2.03
ATP13A3-206ENST00000461660 LOC101927531A0A1B0GV80 90 aa2.34□□□□□ -2.03
ATP13A3-206ENST00000461660 IGKV2-30P06310 120 aa2.34□□□□□ -2.03
ATP13A3-206ENST00000461660 C4orf26Q17RF5 130 aa2.34□□□□□ -2.03
ATP13A3-206ENST00000461660 IGLV7-46A0A075B6I9 117 aa2.34□□□□□ -2.03
ATP13A3-206ENST00000461660 NOTCH2NLQ7Z3S9 236 aa2.34□□□□□ -2.04
ATP13A3-206ENST00000461660 KMT2AQ03164 3969 aa2.33□□□□□ -2.04
ATP13A3-206ENST00000461660 OXTP01178 125 aa2.33□□□□□ -2.04
ATP13A3-206ENST00000461660 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
ATP13A3-206ENST00000461660 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
ATP13A3-206ENST00000461660 FP248Q71RG6 208 aaPredicted RBP2.33□□□□□ -2.04
ATP13A3-206ENST00000461660 LYSTQ99698 3801 aa2.32□□□□□ -2.04
ATP13A3-206ENST00000461660 H7BZZ5 65 aa2.32□□□□□ -2.04
ATP13A3-206ENST00000461660 DNAH11Q96DT5 4516 aa2.32□□□□□ -2.04
ATP13A3-206ENST00000461660 ATP11AUNQ6ZP68 121 aa2.32□□□□□ -2.04
ATP13A3-206ENST00000461660 DNAH6Q9C0G6 4158 aa2.32□□□□□ -2.04
ATP13A3-206ENST00000461660 H3BS24 57 aa2.31□□□□□ -2.04
ATP13A3-206ENST00000461660 SACSQ9NZJ4 4579 aa2.31□□□□□ -2.04
ATP13A3-206ENST00000461660 DNAH2Q9P225 4427 aa2.31□□□□□ -2.04
ATP13A3-206ENST00000461660 CHKB-CPT1BH3BT56 60 aa2.31□□□□□ -2.04
ATP13A3-206ENST00000461660 RYR2Q92736 4967 aa2.31□□□□□ -2.04
ATP13A3-206ENST00000461660 KRTAP10-8P60410 259 aa2.31□□□□□ -2.04
ATP13A3-206ENST00000461660 HYDINQ4G0P3 5121 aa2.31□□□□□ -2.04
ATP13A3-206ENST00000461660 SERP1Q9Y6X1 66 aa2.3□□□□□ -2.04
ATP13A3-206ENST00000461660 EPPK1P58107 5090 aaKnown RBP2.3□□□□□ -2.04
ATP13A3-206ENST00000461660 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
ATP13A3-206ENST00000461660 ZCCHC13Q8WW36 166 aaKnown RBP2.3□□□□□ -2.04
ATP13A3-206ENST00000461660 CYSTM1Q9H1C7 97 aa2.3□□□□□ -2.04
ATP13A3-206ENST00000461660 DNAH5Q8TE73 4624 aa2.3□□□□□ -2.04
ATP13A3-206ENST00000461660 Q8N9P0 234 aaPredicted RBP2.3□□□□□ -2.04
ATP13A3-206ENST00000461660 DYNC1H1Q14204 4646 aaKnown RBP2.29□□□□□ -2.04
ATP13A3-206ENST00000461660 Q5W150 140 aa2.29□□□□□ -2.04
ATP13A3-206ENST00000461660 SPANXA2-OT1Q8N9U9 137 aa2.28□□□□□ -2.04
ATP13A3-206ENST00000461660 LRP1BQ9NZR2 4599 aa2.28□□□□□ -2.04
ATP13A3-206ENST00000461660 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
ATP13A3-206ENST00000461660 V9GYY9 64 aa2.28□□□□□ -2.04
ATP13A3-206ENST00000461660 KRTAP19-1Q8IUB9 90 aa2.28□□□□□ -2.05
ATP13A3-206ENST00000461660 CYP4F30PQ9H0H9 118 aa2.28□□□□□ -2.05
ATP13A3-206ENST00000461660 SMIM26A0A096LP01 95 aa2.27□□□□□ -2.05
ATP13A3-206ENST00000461660 RPS28P62857 69 aaKnown RBP2.27□□□□□ -2.05
ATP13A3-206ENST00000461660 BRK1Q8WUW1 75 aa2.27□□□□□ -2.05
ATP13A3-206ENST00000461660 ACYP2P14621 99 aa2.26□□□□□ -2.05
ATP13A3-206ENST00000461660 FRAS1Q86XX4 4008 aa2.26□□□□□ -2.05
ATP13A3-206ENST00000461660 KRTAP16-1A8MUX0 517 aa2.26□□□□□ -2.05
ATP13A3-206ENST00000461660 A8MUU9 505 aa2.26□□□□□ -2.05
ATP13A3-206ENST00000461660 HRES1P13985 223 aa2.26□□□□□ -2.05
ATP13A3-206ENST00000461660 Q75L30 129 aa2.26□□□□□ -2.05
ATP13A3-206ENST00000461660 C20orf166-AS1Q96NR2 134 aa2.26□□□□□ -2.05
ATP13A3-206ENST00000461660 MPLKIPQ8TAP9 179 aa2.25□□□□□ -2.05
ATP13A3-206ENST00000461660 SPINK7P58062 85 aa2.25□□□□□ -2.05
ATP13A3-206ENST00000461660 FAT2Q9NYQ8 4349 aa2.25□□□□□ -2.05
ATP13A3-206ENST00000461660 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
ATP13A3-206ENST00000461660 MT1HL1P0DM35 61 aa2.25□□□□□ -2.05
ATP13A3-206ENST00000461660 COA5Q86WW8 74 aa2.25□□□□□ -2.05
ATP13A3-206ENST00000461660 FAT1Q14517 4588 aa2.24□□□□□ -2.05
ATP13A3-206ENST00000461660 SPTSSBQ8NFR3 76 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms