RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
VARS-219ENST00000461328 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
VARS-219ENST00000461328 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
VARS-219ENST00000461328 J3KT08 172 aa8.01□□□□□ -1.13
VARS-219ENST00000461328 M0R2T5 61 aa8.01□□□□□ -1.13
VARS-219ENST00000461328 TAX1BP3O14907 124 aa8.01□□□□□ -1.13
VARS-219ENST00000461328 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
VARS-219ENST00000461328 A0A1W2PPM0 123 aa8□□□□□ -1.13
VARS-219ENST00000461328 C8orf87E5RJ46 101 aa8□□□□□ -1.13
VARS-219ENST00000461328 KRTAP16-1A8MUX0 517 aa7.99□□□□□ -1.13
VARS-219ENST00000461328 MTURNQ8N3F0 131 aa7.98□□□□□ -1.13
VARS-219ENST00000461328 A0A1B0GW54 56 aa7.97□□□□□ -1.13
VARS-219ENST00000461328 H3BT86 120 aa7.97□□□□□ -1.13
VARS-219ENST00000461328 NDUFB1O75438 58 aa7.97□□□□□ -1.13
VARS-219ENST00000461328 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
VARS-219ENST00000461328 LORP23490 312 aaPredicted RBP7.94□□□□□ -1.14
VARS-219ENST00000461328 SPCS1Q9Y6A9 102 aa7.93□□□□□ -1.14
VARS-219ENST00000461328 NREPQ16612 68 aa7.92□□□□□ -1.14
VARS-219ENST00000461328 A8MWP4 228 aa7.91□□□□□ -1.14
VARS-219ENST00000461328 COL5A1-AS1Q5SY13 56 aa7.89□□□□□ -1.15
VARS-219ENST00000461328 C8orf17Q9NRJ1 99 aa7.88□□□□□ -1.15
VARS-219ENST00000461328 IGKV3D-7A0A0C4DH55 119 aa7.86□□□□□ -1.15
VARS-219ENST00000461328 FLGP20930 4061 aaPredicted RBP7.86□□□□□ -1.15
VARS-219ENST00000461328 FAM236DA0A1B0GTK5 79 aa7.85□□□□□ -1.15
VARS-219ENST00000461328 FAM236CP0DP71 79 aa7.85□□□□□ -1.15
VARS-219ENST00000461328 ZCCHC13Q8WW36 166 aaKnown RBP7.84□□□□□ -1.15
VARS-219ENST00000461328 FSIP2Q5CZC0 6907 aa7.84□□□□□ -1.15
VARS-219ENST00000461328 PRR15Q8IV56 129 aa7.83□□□□□ -1.16
VARS-219ENST00000461328 CRCT1Q9UGL9 99 aa7.83□□□□□ -1.16
VARS-219ENST00000461328 Q6ZVQ6 151 aa7.82□□□□□ -1.16
VARS-219ENST00000461328 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
VARS-219ENST00000461328 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
VARS-219ENST00000461328 PCP4L1A6NKN8 68 aa7.79□□□□□ -1.16
VARS-219ENST00000461328 K7EP34 96 aa7.79□□□□□ -1.16
VARS-219ENST00000461328 BPY2O14599 106 aa7.79□□□□□ -1.16
VARS-219ENST00000461328 SMCPP49901 116 aaPredicted RBP7.79□□□□□ -1.16
VARS-219ENST00000461328 K7EQZ3 153 aa7.78□□□□□ -1.16
VARS-219ENST00000461328 MMP24-AS1A0A0U1RRL7 71 aa7.77□□□□□ -1.17
VARS-219ENST00000461328 HRES1P13985 223 aa7.77□□□□□ -1.17
VARS-219ENST00000461328 TMEM254Q8TBM7 123 aa7.75□□□□□ -1.17
VARS-219ENST00000461328 MRPL34Q9BQ48 92 aaKnown RBP7.75□□□□□ -1.17
VARS-219ENST00000461328 hDV103S1A0JD37 113 aa7.74□□□□□ -1.17
VARS-219ENST00000461328 NDUFS5O43920 106 aa7.74□□□□□ -1.17
VARS-219ENST00000461328 SPINK7P58062 85 aa7.74□□□□□ -1.17
VARS-219ENST00000461328 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
VARS-219ENST00000461328 GTF2H5Q6ZYL4 71 aa7.73□□□□□ -1.17
VARS-219ENST00000461328 MPLKIPQ8TAP9 179 aa7.72□□□□□ -1.17
VARS-219ENST00000461328 Q8N9L7 120 aa7.69□□□□□ -1.18
VARS-219ENST00000461328 UBL5Q9BZL1 73 aa7.69□□□□□ -1.18
VARS-219ENST00000461328 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
VARS-219ENST00000461328 SVIPQ8NHG7 77 aa7.67□□□□□ -1.18
VARS-219ENST00000461328 KRTAP9-8Q9BYQ0 159 aa7.66□□□□□ -1.18
VARS-219ENST00000461328 LINC00846Q9NV44 126 aa7.66□□□□□ -1.18
VARS-219ENST00000461328 CASC2Q6XLA1 102 aa7.65□□□□□ -1.18
VARS-219ENST00000461328 F8W1H4 67 aa7.63□□□□□ -1.19
VARS-219ENST00000461328 HCG22E2RYF7 251 aa7.61□□□□□ -1.19
VARS-219ENST00000461328 ETDBQ3ZM63 59 aa7.61□□□□□ -1.19
VARS-219ENST00000461328 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
VARS-219ENST00000461328 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
VARS-219ENST00000461328 MT2AP02795 61 aa7.56□□□□□ -1.2
VARS-219ENST00000461328 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
VARS-219ENST00000461328 CXCL6P80162 114 aa7.54□□□□□ -1.2
VARS-219ENST00000461328 Q5W150 140 aa7.54□□□□□ -1.2
VARS-219ENST00000461328 MT1FP04733 61 aa7.5□□□□□ -1.21
VARS-219ENST00000461328 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
VARS-219ENST00000461328 H1FX-AS1Q4G0G2 97 aa7.46□□□□□ -1.22
VARS-219ENST00000461328 ACYP1P07311 99 aa7.43□□□□□ -1.22
VARS-219ENST00000461328 C4orf26Q17RF5 130 aa7.41□□□□□ -1.22
VARS-219ENST00000461328 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
VARS-219ENST00000461328 TP53AIP1Q9HCN2 124 aa7.41□□□□□ -1.22
VARS-219ENST00000461328 USH2AO75445 5202 aa7.4□□□□□ -1.22
VARS-219ENST00000461328 FAM240AA0A1B0GVK7 77 aa7.39□□□□□ -1.23
VARS-219ENST00000461328 LCE2BO14633 110 aa7.39□□□□□ -1.23
VARS-219ENST00000461328 ATP5EP2Q5VTU8 51 aa7.38□□□□□ -1.23
VARS-219ENST00000461328 A0A1B0GV90 55 aa7.35□□□□□ -1.23
VARS-219ENST00000461328 HIST1H4AP62805 103 aaKnown RBP7.34□□□□□ -1.23
VARS-219ENST00000461328 SSPOA2VEC9 5147 aa7.31□□□□□ -1.24
VARS-219ENST00000461328 TRAV22A0A0B4J277 110 aa7.29□□□□□ -1.24
VARS-219ENST00000461328 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.29□□□□□ -1.24
VARS-219ENST00000461328 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
VARS-219ENST00000461328 C1orf64Q8NEQ6 169 aa7.29□□□□□ -1.24
VARS-219ENST00000461328 S4R3F8 94 aa7.26□□□□□ -1.25
VARS-219ENST00000461328 C5orf47Q569G3 176 aa7.25□□□□□ -1.25
VARS-219ENST00000461328 LINC00643Q86TS7 51 aa7.25□□□□□ -1.25
VARS-219ENST00000461328 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
VARS-219ENST00000461328 KRTAP3-1Q9BYR8 98 aa7.23□□□□□ -1.25
VARS-219ENST00000461328 CYP4F30PQ9H0H9 118 aa7.23□□□□□ -1.25
VARS-219ENST00000461328 A0A087WVE0 104 aa7.22□□□□□ -1.25
VARS-219ENST00000461328 UQCRQO14949 82 aa7.22□□□□□ -1.25
VARS-219ENST00000461328 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
VARS-219ENST00000461328 H0Y9P7 68 aa7.2□□□□□ -1.26
VARS-219ENST00000461328 FCGBPQ9Y6R7 5405 aaPredicted RBP7.2□□□□□ -1.26
VARS-219ENST00000461328 J3QR89 54 aa7.19□□□□□ -1.26
VARS-219ENST00000461328 ATOX1O00244 68 aa7.18□□□□□ -1.26
VARS-219ENST00000461328 FAM236AA0A1B0GUQ0 79 aa7.17□□□□□ -1.26
VARS-219ENST00000461328 FAM236BA0A1B0GV22 79 aa7.17□□□□□ -1.26
VARS-219ENST00000461328 CSAG1Q6PB30 78 aa7.17□□□□□ -1.26
VARS-219ENST00000461328 LCA10Q71F78 164 aa7.17□□□□□ -1.26
VARS-219ENST00000461328 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
VARS-219ENST00000461328 MP68P56378 58 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms