RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 DNAH10Q8IVF4 4471 aa9.33□□□□□ -0.92
SSR4-206ENST00000460616 MRPL34Q9BQ48 92 aaKnown RBP9.32□□□□□ -0.92
SSR4-206ENST00000460616 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
SSR4-206ENST00000460616 UBE2DNLQ8IWF7 75 aa9.31□□□□□ -0.92
SSR4-206ENST00000460616 PRR26Q8N8Z3 221 aa9.31□□□□□ -0.92
SSR4-206ENST00000460616 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
SSR4-206ENST00000460616 VPS13DQ5THJ4 4388 aa9.29□□□□□ -0.92
SSR4-206ENST00000460616 KMT2AQ03164 3969 aa9.28□□□□□ -0.92
SSR4-206ENST00000460616 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
SSR4-206ENST00000460616 A0A087X002 238 aa9.26□□□□□ -0.93
SSR4-206ENST00000460616 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
SSR4-206ENST00000460616 LINC00313P59037 77 aa9.26□□□□□ -0.93
SSR4-206ENST00000460616 LY6G6CO95867 125 aa9.23□□□□□ -0.93
SSR4-206ENST00000460616 ACYP2P14621 99 aa9.22□□□□□ -0.93
SSR4-206ENST00000460616 HYDINQ4G0P3 5121 aa9.22□□□□□ -0.93
SSR4-206ENST00000460616 ALMS1Q8TCU4 4167 aa9.21□□□□□ -0.93
SSR4-206ENST00000460616 PANO1I0J062 215 aa9.21□□□□□ -0.93
SSR4-206ENST00000460616 Q5W150 140 aa9.21□□□□□ -0.93
SSR4-206ENST00000460616 LINC00483Q53H64 154 aa9.21□□□□□ -0.94
SSR4-206ENST00000460616 PRAC1Q96KF2 57 aa9.2□□□□□ -0.94
SSR4-206ENST00000460616 C8orf87E5RJ46 101 aa9.19□□□□□ -0.94
SSR4-206ENST00000460616 NBDYA0A0U1RRE5 68 aa9.17□□□□□ -0.94
SSR4-206ENST00000460616 KRTAP13-3Q3SY46 172 aa9.16□□□□□ -0.94
SSR4-206ENST00000460616 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.94
SSR4-206ENST00000460616 SACSQ9NZJ4 4579 aa9.15□□□□□ -0.95
SSR4-206ENST00000460616 ADM2Q7Z4H4 148 aa9.14□□□□□ -0.95
SSR4-206ENST00000460616 ZNF706Q9Y5V0 76 aaPredicted RBP9.14□□□□□ -0.95
SSR4-206ENST00000460616 DNAH2Q9P225 4427 aa9.14□□□□□ -0.95
SSR4-206ENST00000460616 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
SSR4-206ENST00000460616 KMT2CQ8NEZ4 4911 aaKnown RBP9.12□□□□□ -0.95
SSR4-206ENST00000460616 A0A1B0GU69 56 aa9.12□□□□□ -0.95
SSR4-206ENST00000460616 SPINK6Q6UWN8 80 aa9.12□□□□□ -0.95
SSR4-206ENST00000460616 DNAH6Q9C0G6 4158 aa9.12□□□□□ -0.95
SSR4-206ENST00000460616 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
SSR4-206ENST00000460616 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.1□□□□□ -0.95
SSR4-206ENST00000460616 SPATA8Q6RVD6 105 aa9.09□□□□□ -0.95
SSR4-206ENST00000460616 SPACA4Q8TDM5 124 aa9.08□□□□□ -0.96
SSR4-206ENST00000460616 Q6ZRN7 208 aaPredicted RBP9.08□□□□□ -0.96
SSR4-206ENST00000460616 LINC01554Q52M75 96 aa9.07□□□□□ -0.96
SSR4-206ENST00000460616 RTL8CO15255 209 aa9.06□□□□□ -0.96
SSR4-206ENST00000460616 FRAS1Q86XX4 4008 aa9.06□□□□□ -0.96
SSR4-206ENST00000460616 PSORS1C2Q9UIG4 136 aa9.04□□□□□ -0.96
SSR4-206ENST00000460616 RYR2Q92736 4967 aa9.04□□□□□ -0.96
SSR4-206ENST00000460616 C4orf48Q5BLP8 95 aa9.04□□□□□ -0.96
SSR4-206ENST00000460616 MIR22HGQ0VDD5 57 aa9.03□□□□□ -0.96
SSR4-206ENST00000460616 IGLV5-52A0A0A0MRZ9 124 aa9.02□□□□□ -0.97
SSR4-206ENST00000460616 UQCR11O14957 56 aa9.02□□□□□ -0.97
SSR4-206ENST00000460616 ZNF861PO60384 105 aa9.02□□□□□ -0.97
SSR4-206ENST00000460616 C1orf134Q5TEV5 83 aa9.02□□□□□ -0.97
SSR4-206ENST00000460616 DNAH17Q9UFH2 4485 aa9□□□□□ -0.97
SSR4-206ENST00000460616 CIRBP-AS1Q8TBR5 109 aa8.98□□□□□ -0.97
SSR4-206ENST00000460616 RETNLBQ9BQ08 111 aa8.98□□□□□ -0.97
SSR4-206ENST00000460616 FAM229AH3BQW9 127 aa8.97□□□□□ -0.97
SSR4-206ENST00000460616 FAT2Q9NYQ8 4349 aa8.97□□□□□ -0.97
SSR4-206ENST00000460616 RYR3Q15413 4870 aa8.97□□□□□ -0.97
SSR4-206ENST00000460616 A0A087WTM6 91 aa8.94□□□□□ -0.98
SSR4-206ENST00000460616 IGKV2-30P06310 120 aa8.94□□□□□ -0.98
SSR4-206ENST00000460616 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
SSR4-206ENST00000460616 DNAH8Q96JB1 4490 aa8.92□□□□□ -0.98
SSR4-206ENST00000460616 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
SSR4-206ENST00000460616 CSAG1Q6PB30 78 aa8.89□□□□□ -0.99
SSR4-206ENST00000460616 PKD1P98161 4303 aa8.89□□□□□ -0.99
SSR4-206ENST00000460616 KRTAP10-2P60368 255 aa8.87□□□□□ -0.99
SSR4-206ENST00000460616 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
SSR4-206ENST00000460616 DNAH5Q8TE73 4624 aa8.86□□□□□ -0.99
SSR4-206ENST00000460616 IGLV7-43P04211 117 aa8.84□□□□□ -0.99
SSR4-206ENST00000460616 IGKV2D-30A0A075B6S6 120 aa8.82□□□□□ -1
SSR4-206ENST00000460616 PKHD1P08F94 4074 aa8.82□□□□□ -1
SSR4-206ENST00000460616 H3BS24 57 aa8.81□□□□□ -1
SSR4-206ENST00000460616 A0A1B0GVY2 172 aa8.77□□□□□ -1.01
SSR4-206ENST00000460616 KRTAP16-1A8MUX0 517 aa8.77□□□□□ -1.01
SSR4-206ENST00000460616 SPINK1P00995 79 aa8.73□□□□□ -1.01
SSR4-206ENST00000460616 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
SSR4-206ENST00000460616 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
SSR4-206ENST00000460616 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
SSR4-206ENST00000460616 KRTAP13-2Q52LG2 175 aa8.67□□□□□ -1.02
SSR4-206ENST00000460616 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
SSR4-206ENST00000460616 Q8N1X5 172 aa8.64□□□□□ -1.03
SSR4-206ENST00000460616 Q6ZSA8 131 aa8.62□□□□□ -1.03
SSR4-206ENST00000460616 A8MUU9 505 aa8.61□□□□□ -1.03
SSR4-206ENST00000460616 H0YAA0 97 aa8.6□□□□□ -1.03
SSR4-206ENST00000460616 APOBP04114 4563 aaKnown RBP8.59□□□□□ -1.03
SSR4-206ENST00000460616 KRTAP25-1Q3LHN0 102 aa8.58□□□□□ -1.04
SSR4-206ENST00000460616 LINC00304Q8N9R0 145 aa8.57□□□□□ -1.04
SSR4-206ENST00000460616 TYMSOSQ8TAI1 123 aa8.52□□□□□ -1.05
SSR4-206ENST00000460616 A0A1B0GU33 70 aa8.52□□□□□ -1.05
SSR4-206ENST00000460616 ROMO1P60602 79 aa8.5□□□□□ -1.05
SSR4-206ENST00000460616 SMR3BP02814 79 aaPredicted RBP8.49□□□□□ -1.05
SSR4-206ENST00000460616 KIAA1109Q2LD37 5005 aa8.48□□□□□ -1.05
SSR4-206ENST00000460616 FAT1Q14517 4588 aa8.46□□□□□ -1.05
SSR4-206ENST00000460616 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.05
SSR4-206ENST00000460616 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.05
SSR4-206ENST00000460616 HSPG2P98160 4391 aa8.46□□□□□ -1.06
SSR4-206ENST00000460616 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
SSR4-206ENST00000460616 RYR1P21817 5038 aa8.44□□□□□ -1.06
SSR4-206ENST00000460616 KRTAP17-1Q9BYP8 105 aa8.43□□□□□ -1.06
SSR4-206ENST00000460616 CRIPTQ9P021 101 aa8.38□□□□□ -1.07
SSR4-206ENST00000460616 KRTAP3-1Q9BYR8 98 aa8.37□□□□□ -1.07
SSR4-206ENST00000460616 K7ERS5 55 aa8.36□□□□□ -1.07
SSR4-206ENST00000460616 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms