RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 HSPG2P98160 4391 aa10.01□□□□□ -0.81
CDK11A-209ENST00000460465 HCG22E2RYF7 251 aa10.01□□□□□ -0.81
CDK11A-209ENST00000460465 ASB16-AS1Q495Z4 193 aa10.01□□□□□ -0.81
CDK11A-209ENST00000460465 SMIM26A0A096LP01 95 aa10□□□□□ -0.81
CDK11A-209ENST00000460465 NDUFB1O75438 58 aa10□□□□□ -0.81
CDK11A-209ENST00000460465 H7BZZ5 65 aa9.99□□□□□ -0.81
CDK11A-209ENST00000460465 PKHD1L1Q86WI1 4243 aa9.99□□□□□ -0.81
CDK11A-209ENST00000460465 WFDC13Q8IUB5 93 aa9.98□□□□□ -0.81
CDK11A-209ENST00000460465 LINC00304Q8N9R0 145 aa9.97□□□□□ -0.81
CDK11A-209ENST00000460465 LIMD2Q9BT23 127 aa9.97□□□□□ -0.81
CDK11A-209ENST00000460465 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
CDK11A-209ENST00000460465 RYR1P21817 5038 aa9.97□□□□□ -0.81
CDK11A-209ENST00000460465 SNURFQ9Y675 71 aa9.96□□□□□ -0.81
CDK11A-209ENST00000460465 SPINK1P00995 79 aa9.96□□□□□ -0.82
CDK11A-209ENST00000460465 A0A1B0GVX0 72 aa9.95□□□□□ -0.82
CDK11A-209ENST00000460465 KLKP1Q107X0 134 aa9.95□□□□□ -0.82
CDK11A-209ENST00000460465 MMP24-AS1A0A0U1RRL7 71 aa9.94□□□□□ -0.82
CDK11A-209ENST00000460465 IGHV6-1A0A0B4J1U7 121 aa9.93□□□□□ -0.82
CDK11A-209ENST00000460465 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
CDK11A-209ENST00000460465 CASC2Q6XLA1 102 aa9.93□□□□□ -0.82
CDK11A-209ENST00000460465 EPPK1P58107 5090 aaKnown RBP9.93□□□□□ -0.82
CDK11A-209ENST00000460465 OCR1Q9BZK8 76 aa9.92□□□□□ -0.82
CDK11A-209ENST00000460465 SPAG11AQ6PDA7 123 aa9.91□□□□□ -0.82
CDK11A-209ENST00000460465 PMAIP1Q13794 54 aa9.9□□□□□ -0.82
CDK11A-209ENST00000460465 C8orf17Q9NRJ1 99 aa9.9□□□□□ -0.82
CDK11A-209ENST00000460465 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
CDK11A-209ENST00000460465 RPS29P62273 56 aaKnown RBP9.89□□□□□ -0.83
CDK11A-209ENST00000460465 Q8N1X5 172 aa9.89□□□□□ -0.83
CDK11A-209ENST00000460465 KIAA1109Q2LD37 5005 aa9.88□□□□□ -0.83
CDK11A-209ENST00000460465 hDV103S1A0JD37 113 aa9.87□□□□□ -0.83
CDK11A-209ENST00000460465 H3BS24 57 aa9.87□□□□□ -0.83
CDK11A-209ENST00000460465 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
CDK11A-209ENST00000460465 A0A0U1RQV1 116 aa9.85□□□□□ -0.83
CDK11A-209ENST00000460465 BRK1Q8WUW1 75 aa9.85□□□□□ -0.83
CDK11A-209ENST00000460465 ATP5EP56381 51 aaPredicted RBP9.84□□□□□ -0.83
CDK11A-209ENST00000460465 NDUFC1O43677 76 aa9.82□□□□□ -0.84
CDK11A-209ENST00000460465 C8orf87E5RJ46 101 aa9.79□□□□□ -0.84
CDK11A-209ENST00000460465 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
CDK11A-209ENST00000460465 TMEM254Q8TBM7 123 aa9.79□□□□□ -0.84
CDK11A-209ENST00000460465 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
CDK11A-209ENST00000460465 LINC00313P59037 77 aa9.76□□□□□ -0.85
CDK11A-209ENST00000460465 LRP1Q07954 4544 aaKnown RBP9.74□□□□□ -0.85
CDK11A-209ENST00000460465 NDUFS5O43920 106 aa9.73□□□□□ -0.85
CDK11A-209ENST00000460465 TNXBP22105 4242 aa9.7□□□□□ -0.86
CDK11A-209ENST00000460465 RETNLBQ9BQ08 111 aa9.7□□□□□ -0.86
CDK11A-209ENST00000460465 TP53AIP1Q9HCN2 124 aa9.7□□□□□ -0.86
CDK11A-209ENST00000460465 FAT3Q8TDW7 4589 aa9.69□□□□□ -0.86
CDK11A-209ENST00000460465 KRTAP16-1A8MUX0 517 aa9.67□□□□□ -0.86
CDK11A-209ENST00000460465 KRTAP4-5Q9BYR2 181 aa9.67□□□□□ -0.86
CDK11A-209ENST00000460465 FLG2Q5D862 2391 aaPredicted RBP9.67□□□□□ -0.86
CDK11A-209ENST00000460465 H0Y9P7 68 aa9.67□□□□□ -0.86
CDK11A-209ENST00000460465 MT1HL1P0DM35 61 aa9.66□□□□□ -0.86
CDK11A-209ENST00000460465 MP68P56378 58 aa9.66□□□□□ -0.86
CDK11A-209ENST00000460465 TRAV22A0A0B4J277 110 aa9.65□□□□□ -0.87
CDK11A-209ENST00000460465 Q8N9P0 234 aaPredicted RBP9.63□□□□□ -0.87
CDK11A-209ENST00000460465 MPLKIPQ8TAP9 179 aa9.62□□□□□ -0.87
CDK11A-209ENST00000460465 ZCCHC13Q8WW36 166 aaKnown RBP9.62□□□□□ -0.87
CDK11A-209ENST00000460465 LINC00208Q96KT6 92 aa9.62□□□□□ -0.87
CDK11A-209ENST00000460465 H3BPC8 53 aa9.59□□□□□ -0.87
CDK11A-209ENST00000460465 RBM12B-AS1Q9P1G2 102 aa9.58□□□□□ -0.88
CDK11A-209ENST00000460465 C9orf92A6NGG3 77 aa9.57□□□□□ -0.88
CDK11A-209ENST00000460465 MYCBP2O75592 4640 aa9.57□□□□□ -0.88
CDK11A-209ENST00000460465 Q5W150 140 aa9.57□□□□□ -0.88
CDK11A-209ENST00000460465 C1orf64Q8NEQ6 169 aa9.57□□□□□ -0.88
CDK11A-209ENST00000460465 KRTAP13-3Q3SY46 172 aa9.54□□□□□ -0.88
CDK11A-209ENST00000460465 BIRC6Q9NR09 4857 aa9.51□□□□□ -0.89
CDK11A-209ENST00000460465 Q1T7F1 81 aa9.49□□□□□ -0.89
CDK11A-209ENST00000460465 DMBT1Q9UGM3 2413 aaPredicted RBP9.48□□□□□ -0.89
CDK11A-209ENST00000460465 C20orf166-AS1Q96NR2 134 aa9.45□□□□□ -0.9
CDK11A-209ENST00000460465 IGLV7-46A0A075B6I9 117 aa9.44□□□□□ -0.9
CDK11A-209ENST00000460465 LOC101927531A0A1B0GV80 90 aa9.44□□□□□ -0.9
CDK11A-209ENST00000460465 A8MUU9 505 aa9.44□□□□□ -0.9
CDK11A-209ENST00000460465 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
CDK11A-209ENST00000460465 HERC2O95714 4834 aa9.42□□□□□ -0.9
CDK11A-209ENST00000460465 PRR4Q16378 134 aa9.42□□□□□ -0.9
CDK11A-209ENST00000460465 ABCA13Q86UQ4 5058 aa9.39□□□□□ -0.91
CDK11A-209ENST00000460465 KTN1-AS1Q86SY8 53 aa9.39□□□□□ -0.91
CDK11A-209ENST00000460465 CYP4F30PQ9H0H9 118 aa9.39□□□□□ -0.91
CDK11A-209ENST00000460465 IGKV2-30P06310 120 aa9.37□□□□□ -0.91
CDK11A-209ENST00000460465 Q75L30 129 aa9.36□□□□□ -0.91
CDK11A-209ENST00000460465 SPANXA2-OT1Q8N9U9 137 aa9.34□□□□□ -0.91
CDK11A-209ENST00000460465 J3QL48 77 aa9.34□□□□□ -0.91
CDK11A-209ENST00000460465 PSPHP1O15172 72 aa9.33□□□□□ -0.92
CDK11A-209ENST00000460465 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
CDK11A-209ENST00000460465 XP32Q5T750 250 aa9.31□□□□□ -0.92
CDK11A-209ENST00000460465 RPL37P61927 97 aaKnown RBP9.26□□□□□ -0.93
CDK11A-209ENST00000460465 C7orf65Q6ZTY9 151 aa9.26□□□□□ -0.93
CDK11A-209ENST00000460465 HRES1P13985 223 aa9.25□□□□□ -0.93
CDK11A-209ENST00000460465 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
CDK11A-209ENST00000460465 A8MUN3 132 aa9.24□□□□□ -0.93
CDK11A-209ENST00000460465 A0A0A0MQY5 61 aa9.23□□□□□ -0.93
CDK11A-209ENST00000460465 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
CDK11A-209ENST00000460465 Q5VV11 94 aa9.17□□□□□ -0.94
CDK11A-209ENST00000460465 SPINK7P58062 85 aa9.16□□□□□ -0.94
CDK11A-209ENST00000460465 A8MU10 97 aa9.14□□□□□ -0.95
CDK11A-209ENST00000460465 A6NN06 94 aa9.11□□□□□ -0.95
CDK11A-209ENST00000460465 LCA10Q71F78 164 aa9.11□□□□□ -0.95
CDK11A-209ENST00000460465 DMAC1Q96GE9 116 aa9.11□□□□□ -0.95
CDK11A-209ENST00000460465 CHKB-CPT1BH3BT56 60 aa9.1□□□□□ -0.95
CDK11A-209ENST00000460465 COA5Q86WW8 74 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms