RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
CMTM3-203ENST00000460097 DEFB116Q30KQ4 102 aa9.64□□□□□ -0.87
CMTM3-203ENST00000460097 TP53AIP1Q9HCN2 124 aa9.63□□□□□ -0.87
CMTM3-203ENST00000460097 ASB16-AS1Q495Z4 193 aa9.63□□□□□ -0.87
CMTM3-203ENST00000460097 Q6ZSA8 131 aa9.63□□□□□ -0.87
CMTM3-203ENST00000460097 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
CMTM3-203ENST00000460097 A0A0G2JQZ4 141 aa9.6□□□□□ -0.87
CMTM3-203ENST00000460097 A0A1W2PNN7 141 aa9.6□□□□□ -0.87
CMTM3-203ENST00000460097 PRLHP81277 87 aa9.6□□□□□ -0.87
CMTM3-203ENST00000460097 PRR15LQ9BU68 103 aa9.6□□□□□ -0.87
CMTM3-203ENST00000460097 HSPG2P98160 4391 aa9.6□□□□□ -0.87
CMTM3-203ENST00000460097 MMP24-AS1A0A0U1RRL7 71 aa9.6□□□□□ -0.87
CMTM3-203ENST00000460097 KTN1-AS1Q86SY8 53 aa9.6□□□□□ -0.87
CMTM3-203ENST00000460097 COA5Q86WW8 74 aa9.6□□□□□ -0.87
CMTM3-203ENST00000460097 HERC2O95714 4834 aa9.58□□□□□ -0.88
CMTM3-203ENST00000460097 A0A096LNI7 61 aa9.58□□□□□ -0.88
CMTM3-203ENST00000460097 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
CMTM3-203ENST00000460097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
CMTM3-203ENST00000460097 NDUFS5O43920 106 aa9.57□□□□□ -0.88
CMTM3-203ENST00000460097 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
CMTM3-203ENST00000460097 PANO1I0J062 215 aa9.56□□□□□ -0.88
CMTM3-203ENST00000460097 CHTF8P0CG12 524 aa9.56□□□□□ -0.88
CMTM3-203ENST00000460097 MOBPQ13875 183 aa9.56□□□□□ -0.88
CMTM3-203ENST00000460097 IGKV2-24A0A0C4DH68 120 aa9.55□□□□□ -0.88
CMTM3-203ENST00000460097 CIRBP-AS1Q8TBR5 109 aa9.55□□□□□ -0.88
CMTM3-203ENST00000460097 CDC42SE1Q9NRR8 79 aa9.55□□□□□ -0.88
CMTM3-203ENST00000460097 PHF5AQ7RTV0 110 aaKnown RBP9.55□□□□□ -0.88
CMTM3-203ENST00000460097 SPACA4Q8TDM5 124 aa9.55□□□□□ -0.88
CMTM3-203ENST00000460097 LCA10Q71F78 164 aa9.53□□□□□ -0.88
CMTM3-203ENST00000460097 SMR3BP02814 79 aaPredicted RBP9.52□□□□□ -0.89
CMTM3-203ENST00000460097 FAT1Q14517 4588 aa9.5□□□□□ -0.89
CMTM3-203ENST00000460097 A6NN06 94 aa9.5□□□□□ -0.89
CMTM3-203ENST00000460097 A8MU10 97 aa9.5□□□□□ -0.89
CMTM3-203ENST00000460097 A6NED7 52 aa9.5□□□□□ -0.89
CMTM3-203ENST00000460097 Q8N1X5 172 aa9.5□□□□□ -0.89
CMTM3-203ENST00000460097 KRTAP17-1Q9BYP8 105 aa9.47□□□□□ -0.89
CMTM3-203ENST00000460097 KRTAP13-1Q8IUC0 172 aa9.47□□□□□ -0.89
CMTM3-203ENST00000460097 FAM229AH3BQW9 127 aa9.46□□□□□ -0.9
CMTM3-203ENST00000460097 Q96NJ1 140 aa9.46□□□□□ -0.9
CMTM3-203ENST00000460097 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
CMTM3-203ENST00000460097 KRTAP11-1Q8IUC1 163 aa9.43□□□□□ -0.9
CMTM3-203ENST00000460097 Q5VSD8 79 aa9.42□□□□□ -0.9
CMTM3-203ENST00000460097 SPTSSBQ8NFR3 76 aa9.42□□□□□ -0.9
CMTM3-203ENST00000460097 LINC00483Q53H64 154 aa9.4□□□□□ -0.9
CMTM3-203ENST00000460097 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.9
CMTM3-203ENST00000460097 PLA2G1BP04054 148 aaKnown RBP9.4□□□□□ -0.91
CMTM3-203ENST00000460097 KRTAP4-5Q9BYR2 181 aa9.4□□□□□ -0.91
CMTM3-203ENST00000460097 A0A1B0GVX0 72 aa9.39□□□□□ -0.91
CMTM3-203ENST00000460097 C7orf65Q6ZTY9 151 aa9.39□□□□□ -0.91
CMTM3-203ENST00000460097 RBM12B-AS1Q9P1G2 102 aa9.39□□□□□ -0.91
CMTM3-203ENST00000460097 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
CMTM3-203ENST00000460097 HRES1P13985 223 aa9.37□□□□□ -0.91
CMTM3-203ENST00000460097 MRPL34Q9BQ48 92 aaKnown RBP9.37□□□□□ -0.91
CMTM3-203ENST00000460097 ABCA13Q86UQ4 5058 aa9.36□□□□□ -0.91
CMTM3-203ENST00000460097 SPAG11AQ6PDA7 123 aa9.35□□□□□ -0.91
CMTM3-203ENST00000460097 SRRM2Q9UQ35 2752 aaKnown RBP9.34□□□□□ -0.91
CMTM3-203ENST00000460097 ZNF706Q9Y5V0 76 aaPredicted RBP9.33□□□□□ -0.92
CMTM3-203ENST00000460097 KRTAP10-4P60372 401 aaPredicted RBP9.32□□□□□ -0.92
CMTM3-203ENST00000460097 PCLOQ9Y6V0 5065 aa9.3□□□□□ -0.92
CMTM3-203ENST00000460097 PSORS1C2Q9UIG4 136 aa9.28□□□□□ -0.92
CMTM3-203ENST00000460097 A0A087X002 238 aa9.27□□□□□ -0.92
CMTM3-203ENST00000460097 SPINK7P58062 85 aa9.27□□□□□ -0.92
CMTM3-203ENST00000460097 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
CMTM3-203ENST00000460097 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
CMTM3-203ENST00000460097 IGLV9-49A0A0B4J1Y8 123 aa9.24□□□□□ -0.93
CMTM3-203ENST00000460097 ACYP2P14621 99 aa9.23□□□□□ -0.93
CMTM3-203ENST00000460097 C8orf87E5RJ46 101 aa9.19□□□□□ -0.94
CMTM3-203ENST00000460097 IGLV7-43P04211 117 aa9.19□□□□□ -0.94
CMTM3-203ENST00000460097 PKHD1L1Q86WI1 4243 aa9.18□□□□□ -0.94
CMTM3-203ENST00000460097 SPINK6Q6UWN8 80 aa9.18□□□□□ -0.94
CMTM3-203ENST00000460097 FLG2Q5D862 2391 aaPredicted RBP9.18□□□□□ -0.94
CMTM3-203ENST00000460097 MYCBP2O75592 4640 aa9.17□□□□□ -0.94
CMTM3-203ENST00000460097 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
CMTM3-203ENST00000460097 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
CMTM3-203ENST00000460097 PRR26Q8N8Z3 221 aa9.14□□□□□ -0.95
CMTM3-203ENST00000460097 Q5W150 140 aa9.13□□□□□ -0.95
CMTM3-203ENST00000460097 ZNF861PO60384 105 aa9.12□□□□□ -0.95
CMTM3-203ENST00000460097 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
CMTM3-203ENST00000460097 FAT3Q8TDW7 4589 aa9.11□□□□□ -0.95
CMTM3-203ENST00000460097 SPATA8Q6RVD6 105 aa9.1□□□□□ -0.95
CMTM3-203ENST00000460097 LINC00313P59037 77 aa9.06□□□□□ -0.96
CMTM3-203ENST00000460097 J3QL48 77 aa9.04□□□□□ -0.96
CMTM3-203ENST00000460097 SSBP3-AS1Q7Z2R9 100 aa9.04□□□□□ -0.96
CMTM3-203ENST00000460097 A0A1B0GU69 56 aa9.03□□□□□ -0.96
CMTM3-203ENST00000460097 IGKV2-30P06310 120 aa9.01□□□□□ -0.97
CMTM3-203ENST00000460097 UQCR11O14957 56 aa8.98□□□□□ -0.97
CMTM3-203ENST00000460097 KRTAP1-4P0C5Y4 121 aa8.98□□□□□ -0.97
CMTM3-203ENST00000460097 DMBT1Q9UGM3 2413 aaPredicted RBP8.97□□□□□ -0.97
CMTM3-203ENST00000460097 MT1HL1P0DM35 61 aa8.96□□□□□ -0.97
CMTM3-203ENST00000460097 TNXBP22105 4242 aa8.95□□□□□ -0.98
CMTM3-203ENST00000460097 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
CMTM3-203ENST00000460097 MIR22HGQ0VDD5 57 aa8.94□□□□□ -0.98
CMTM3-203ENST00000460097 ANAPC11Q9NYG5 84 aa8.94□□□□□ -0.98
CMTM3-203ENST00000460097 HERC1Q15751 4861 aa8.93□□□□□ -0.98
CMTM3-203ENST00000460097 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
CMTM3-203ENST00000460097 PRAC1Q96KF2 57 aa8.89□□□□□ -0.99
CMTM3-203ENST00000460097 KRTAP16-1A8MUX0 517 aa8.87□□□□□ -0.99
CMTM3-203ENST00000460097 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
CMTM3-203ENST00000460097 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -1
CMTM3-203ENST00000460097 KRTAP13-2Q52LG2 175 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms