RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 B9D2Q9BPU9 175 aa5.28□□□□□ -1.56
VPS50-208ENST00000458707 MGAM2Q2M2H8 2515 aa5.27□□□□□ -1.57
VPS50-208ENST00000458707 PRR4Q16378 134 aa5.27□□□□□ -1.57
VPS50-208ENST00000458707 CASC2Q6XLA1 102 aa5.27□□□□□ -1.57
VPS50-208ENST00000458707 LINC00472Q9H8W2 130 aa5.27□□□□□ -1.57
VPS50-208ENST00000458707 A6NED7 52 aa5.26□□□□□ -1.57
VPS50-208ENST00000458707 A8MWP4 228 aa5.26□□□□□ -1.57
VPS50-208ENST00000458707 H0Y9P7 68 aa5.26□□□□□ -1.57
VPS50-208ENST00000458707 PRR15LQ9BU68 103 aa5.26□□□□□ -1.57
VPS50-208ENST00000458707 C9orf163Q8N9P6 203 aa5.25□□□□□ -1.57
VPS50-208ENST00000458707 IGKV2-24A0A0C4DH68 120 aa5.24□□□□□ -1.57
VPS50-208ENST00000458707 PLAC8Q9NZF1 115 aa5.24□□□□□ -1.57
VPS50-208ENST00000458707 TENM2Q9NT68 2774 aa5.24□□□□□ -1.57
VPS50-208ENST00000458707 KRTAP11-1Q8IUC1 163 aa5.24□□□□□ -1.57
VPS50-208ENST00000458707 KRTAP1-5Q9BYS1 174 aa5.23□□□□□ -1.57
VPS50-208ENST00000458707 MMP24-AS1A0A0U1RRL7 71 aa5.22□□□□□ -1.57
VPS50-208ENST00000458707 C14orf177Q52M58 125 aa5.21□□□□□ -1.58
VPS50-208ENST00000458707 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
VPS50-208ENST00000458707 EPPK1P58107 5090 aaKnown RBP5.21□□□□□ -1.58
VPS50-208ENST00000458707 SRRM2Q9UQ35 2752 aaKnown RBP5.2□□□□□ -1.58
VPS50-208ENST00000458707 DNAH10Q8IVF4 4471 aa5.19□□□□□ -1.58
VPS50-208ENST00000458707 HUWE1Q7Z6Z7 4374 aaKnown RBP5.19□□□□□ -1.58
VPS50-208ENST00000458707 IGLV7-46A0A075B6I9 117 aa5.19□□□□□ -1.58
VPS50-208ENST00000458707 CHTF8P0CG12 524 aa5.19□□□□□ -1.58
VPS50-208ENST00000458707 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
VPS50-208ENST00000458707 PRKDCP78527 4128 aaKnown RBP5.18□□□□□ -1.58
VPS50-208ENST00000458707 Q96NJ1 140 aa5.18□□□□□ -1.58
VPS50-208ENST00000458707 LYSTQ99698 3801 aa5.18□□□□□ -1.58
VPS50-208ENST00000458707 PRB2P02812 416 aaPredicted RBP5.17□□□□□ -1.58
VPS50-208ENST00000458707 TP53AIP1Q9HCN2 124 aa5.17□□□□□ -1.58
VPS50-208ENST00000458707 DNAH9Q9NYC9 4486 aa5.17□□□□□ -1.58
VPS50-208ENST00000458707 PRAC1Q96KF2 57 aa5.17□□□□□ -1.58
VPS50-208ENST00000458707 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
VPS50-208ENST00000458707 K7EIL1 84 aa5.16□□□□□ -1.58
VPS50-208ENST00000458707 Q6ZR54 194 aa5.16□□□□□ -1.58
VPS50-208ENST00000458707 COA5Q86WW8 74 aa5.16□□□□□ -1.58
VPS50-208ENST00000458707 IGHV6-1A0A0B4J1U7 121 aa5.15□□□□□ -1.58
VPS50-208ENST00000458707 NOTCH2NLQ7Z3S9 236 aa5.15□□□□□ -1.58
VPS50-208ENST00000458707 APLNQ9ULZ1 77 aa5.14□□□□□ -1.59
VPS50-208ENST00000458707 RTL8CO15255 209 aa5.13□□□□□ -1.59
VPS50-208ENST00000458707 PCLOQ9Y6V0 5065 aa5.13□□□□□ -1.59
VPS50-208ENST00000458707 LINC00483Q53H64 154 aa5.13□□□□□ -1.59
VPS50-208ENST00000458707 C8orf17Q9NRJ1 99 aa5.13□□□□□ -1.59
VPS50-208ENST00000458707 ZNF706Q9Y5V0 76 aaPredicted RBP5.13□□□□□ -1.59
VPS50-208ENST00000458707 UBE2DNLQ8IWF7 75 aa5.12□□□□□ -1.59
VPS50-208ENST00000458707 KRTAP10-2P60368 255 aa5.11□□□□□ -1.59
VPS50-208ENST00000458707 RETNLBQ9BQ08 111 aa5.11□□□□□ -1.59
VPS50-208ENST00000458707 HYDINQ4G0P3 5121 aa5.11□□□□□ -1.59
VPS50-208ENST00000458707 COL7A1Q02388 2944 aa5.11□□□□□ -1.59
VPS50-208ENST00000458707 DYNC2H1Q8NCM8 4307 aaKnown RBP5.11□□□□□ -1.59
VPS50-208ENST00000458707 PANO1I0J062 215 aa5.11□□□□□ -1.59
VPS50-208ENST00000458707 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
VPS50-208ENST00000458707 PCOTHQ58A44 107 aa5.1□□□□□ -1.59
VPS50-208ENST00000458707 Q6ZRN7 208 aaPredicted RBP5.09□□□□□ -1.59
VPS50-208ENST00000458707 IGLV9-49A0A0B4J1Y8 123 aa5.09□□□□□ -1.6
VPS50-208ENST00000458707 SPINK7P58062 85 aa5.09□□□□□ -1.6
VPS50-208ENST00000458707 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.6
VPS50-208ENST00000458707 DNAH7Q8WXX0 4024 aa5.08□□□□□ -1.6
VPS50-208ENST00000458707 ADM2Q7Z4H4 148 aa5.08□□□□□ -1.6
VPS50-208ENST00000458707 WWC2-AS2Q96NR7 200 aa5.08□□□□□ -1.6
VPS50-208ENST00000458707 MRPL34Q9BQ48 92 aaKnown RBP5.08□□□□□ -1.6
VPS50-208ENST00000458707 NBDYA0A0U1RRE5 68 aa5.07□□□□□ -1.6
VPS50-208ENST00000458707 RYR1P21817 5038 aa5.07□□□□□ -1.6
VPS50-208ENST00000458707 STAB2Q8WWQ8 2551 aa5.07□□□□□ -1.6
VPS50-208ENST00000458707 HRES1P13985 223 aa5.06□□□□□ -1.6
VPS50-208ENST00000458707 CSMD3Q7Z407 3707 aa5.05□□□□□ -1.6
VPS50-208ENST00000458707 SPAG11AQ6PDA7 123 aa5.05□□□□□ -1.6
VPS50-208ENST00000458707 CDK2AP2O75956 126 aa5.04□□□□□ -1.6
VPS50-208ENST00000458707 KRTAP13-3Q3SY46 172 aa5.03□□□□□ -1.6
VPS50-208ENST00000458707 ALMS1Q8TCU4 4167 aa5.03□□□□□ -1.6
VPS50-208ENST00000458707 IGLV5-52A0A0A0MRZ9 124 aa5.03□□□□□ -1.6
VPS50-208ENST00000458707 PSORS1C2Q9UIG4 136 aa5.02□□□□□ -1.61
VPS50-208ENST00000458707 HERC2O95714 4834 aa5.02□□□□□ -1.61
VPS50-208ENST00000458707 C1orf134Q5TEV5 83 aa5.01□□□□□ -1.61
VPS50-208ENST00000458707 HECTD4Q9Y4D8 3996 aa5.01□□□□□ -1.61
VPS50-208ENST00000458707 ZNF861PO60384 105 aa5□□□□□ -1.61
VPS50-208ENST00000458707 ROMO1P60602 79 aa5□□□□□ -1.61
VPS50-208ENST00000458707 RYR2Q92736 4967 aa4.99□□□□□ -1.61
VPS50-208ENST00000458707 A0A087WTM6 91 aa4.99□□□□□ -1.61
VPS50-208ENST00000458707 Q5W150 140 aa4.99□□□□□ -1.61
VPS50-208ENST00000458707 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
VPS50-208ENST00000458707 NUPR2A6NF83 97 aa4.98□□□□□ -1.61
VPS50-208ENST00000458707 SPATA8Q6RVD6 105 aa4.98□□□□□ -1.61
VPS50-208ENST00000458707 PLECQ15149 4684 aaKnown RBP4.98□□□□□ -1.61
VPS50-208ENST00000458707 ANAPC11Q9NYG5 84 aa4.97□□□□□ -1.61
VPS50-208ENST00000458707 DNAH8Q96JB1 4490 aa4.97□□□□□ -1.61
VPS50-208ENST00000458707 ACYP2P14621 99 aa4.96□□□□□ -1.62
VPS50-208ENST00000458707 VPS13DQ5THJ4 4388 aa4.95□□□□□ -1.62
VPS50-208ENST00000458707 FRAS1Q86XX4 4008 aa4.95□□□□□ -1.62
VPS50-208ENST00000458707 DMAC1Q96GE9 116 aa4.94□□□□□ -1.62
VPS50-208ENST00000458707 SPINK6Q6UWN8 80 aa4.94□□□□□ -1.62
VPS50-208ENST00000458707 DNAH17Q9UFH2 4485 aa4.92□□□□□ -1.62
VPS50-208ENST00000458707 IGLV7-43P04211 117 aa4.92□□□□□ -1.62
VPS50-208ENST00000458707 SSBP3-AS1Q7Z2R9 100 aa4.92□□□□□ -1.62
VPS50-208ENST00000458707 CIRBP-AS1Q8TBR5 109 aa4.9□□□□□ -1.62
VPS50-208ENST00000458707 STARD9Q9P2P6 4700 aa4.9□□□□□ -1.63
VPS50-208ENST00000458707 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
VPS50-208ENST00000458707 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
VPS50-208ENST00000458707 IGKV2-30P06310 120 aa4.88□□□□□ -1.63
VPS50-208ENST00000458707 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms