RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SCGB1A1P11684 91 aa5.34□□□□□ -1.55
VPS50-207ENST00000458530 CXCL6P80162 114 aa5.34□□□□□ -1.55
VPS50-207ENST00000458530 SSBP3-AS1Q7Z2R9 100 aa5.34□□□□□ -1.55
VPS50-207ENST00000458530 SS18L2Q9UHA2 77 aa5.34□□□□□ -1.55
VPS50-207ENST00000458530 CD164Q04900 197 aa5.32□□□□□ -1.56
VPS50-207ENST00000458530 A0A087WSZ3 146 aa5.31□□□□□ -1.56
VPS50-207ENST00000458530 BPY2O14599 106 aa5.31□□□□□ -1.56
VPS50-207ENST00000458530 IGKV3D-7A0A0C4DH55 119 aa5.3□□□□□ -1.56
VPS50-207ENST00000458530 ANAPC11Q9NYG5 84 aa5.3□□□□□ -1.56
VPS50-207ENST00000458530 LRP2P98164 4655 aa5.3□□□□□ -1.56
VPS50-207ENST00000458530 J3KT08 172 aa5.28□□□□□ -1.56
VPS50-207ENST00000458530 KRTAP1-4P0C5Y4 121 aa5.28□□□□□ -1.56
VPS50-207ENST00000458530 HIST1H4AP62805 103 aaKnown RBP5.28□□□□□ -1.56
VPS50-207ENST00000458530 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
VPS50-207ENST00000458530 A0A0G2JQZ4 141 aa5.27□□□□□ -1.57
VPS50-207ENST00000458530 TYMSOSQ8TAI1 123 aa5.27□□□□□ -1.57
VPS50-207ENST00000458530 A0A087X002 238 aa5.26□□□□□ -1.57
VPS50-207ENST00000458530 MT1HL1P0DM35 61 aa5.26□□□□□ -1.57
VPS50-207ENST00000458530 LIMD2Q9BT23 127 aa5.26□□□□□ -1.57
VPS50-207ENST00000458530 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
VPS50-207ENST00000458530 HRCT1Q6UXD1 115 aa5.25□□□□□ -1.57
VPS50-207ENST00000458530 TNXBP22105 4242 aa5.25□□□□□ -1.57
VPS50-207ENST00000458530 FAM236AA0A1B0GUQ0 79 aa5.23□□□□□ -1.57
VPS50-207ENST00000458530 FAM236BA0A1B0GV22 79 aa5.23□□□□□ -1.57
VPS50-207ENST00000458530 NDUFB1O75438 58 aa5.23□□□□□ -1.57
VPS50-207ENST00000458530 ASB16-AS1Q495Z4 193 aa5.23□□□□□ -1.57
VPS50-207ENST00000458530 SPAG11AQ6PDA7 123 aa5.23□□□□□ -1.57
VPS50-207ENST00000458530 ATOX1O00244 68 aa5.22□□□□□ -1.57
VPS50-207ENST00000458530 SPINK1P00995 79 aa5.22□□□□□ -1.57
VPS50-207ENST00000458530 RPS29P62273 56 aaKnown RBP5.22□□□□□ -1.57
VPS50-207ENST00000458530 Q5XG85 94 aa5.22□□□□□ -1.57
VPS50-207ENST00000458530 LINC00472Q9H8W2 130 aa5.22□□□□□ -1.57
VPS50-207ENST00000458530 IGKV4-1P06312 121 aa5.21□□□□□ -1.58
VPS50-207ENST00000458530 LINC00304Q8N9R0 145 aa5.21□□□□□ -1.58
VPS50-207ENST00000458530 A8MWP4 228 aa5.2□□□□□ -1.58
VPS50-207ENST00000458530 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
VPS50-207ENST00000458530 A0A087WVE0 104 aa5.19□□□□□ -1.58
VPS50-207ENST00000458530 DSCR10P59022 87 aa5.19□□□□□ -1.58
VPS50-207ENST00000458530 SMIM20Q8N5G0 67 aa5.19□□□□□ -1.58
VPS50-207ENST00000458530 ANAPC13Q9BS18 74 aa5.19□□□□□ -1.58
VPS50-207ENST00000458530 K7EQZ3 153 aa5.18□□□□□ -1.58
VPS50-207ENST00000458530 PCP4P48539 62 aa5.17□□□□□ -1.58
VPS50-207ENST00000458530 DEFB116Q30KQ4 102 aa5.17□□□□□ -1.58
VPS50-207ENST00000458530 PRR15Q8IV56 129 aa5.17□□□□□ -1.58
VPS50-207ENST00000458530 Q8N9L7 120 aa5.17□□□□□ -1.58
VPS50-207ENST00000458530 Q96NJ1 140 aa5.17□□□□□ -1.58
VPS50-207ENST00000458530 HCG22E2RYF7 251 aa5.16□□□□□ -1.58
VPS50-207ENST00000458530 A0A1B0GVX0 72 aa5.14□□□□□ -1.59
VPS50-207ENST00000458530 C8orf87E5RJ46 101 aa5.13□□□□□ -1.59
VPS50-207ENST00000458530 C1orf195Q5TG92 126 aa5.12□□□□□ -1.59
VPS50-207ENST00000458530 CASC2Q6XLA1 102 aa5.12□□□□□ -1.59
VPS50-207ENST00000458530 SERP2Q8N6R1 65 aa5.12□□□□□ -1.59
VPS50-207ENST00000458530 TRAV7A0A075B6U4 112 aa5.11□□□□□ -1.59
VPS50-207ENST00000458530 IGHV6-1A0A0B4J1U7 121 aa5.11□□□□□ -1.59
VPS50-207ENST00000458530 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
VPS50-207ENST00000458530 C8orf17Q9NRJ1 99 aa5.11□□□□□ -1.59
VPS50-207ENST00000458530 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
VPS50-207ENST00000458530 hDV103S1A0JD37 113 aa5.1□□□□□ -1.59
VPS50-207ENST00000458530 WFDC13Q8IUB5 93 aa5.1□□□□□ -1.59
VPS50-207ENST00000458530 UQCRQO14949 82 aa5.09□□□□□ -1.59
VPS50-207ENST00000458530 COX7CP15954 63 aa5.09□□□□□ -1.59
VPS50-207ENST00000458530 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
VPS50-207ENST00000458530 TMEM254Q8TBM7 123 aa5.08□□□□□ -1.6
VPS50-207ENST00000458530 LINC00313P59037 77 aa5.06□□□□□ -1.6
VPS50-207ENST00000458530 OCR1Q9BZK8 76 aa5.06□□□□□ -1.6
VPS50-207ENST00000458530 TP53AIP1Q9HCN2 124 aa5.06□□□□□ -1.6
VPS50-207ENST00000458530 MRPL34Q9BQ48 92 aaKnown RBP5.05□□□□□ -1.6
VPS50-207ENST00000458530 MUC2Q02817 5179 aa5.05□□□□□ -1.6
VPS50-207ENST00000458530 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
VPS50-207ENST00000458530 FAT4Q6V0I7 4981 aa5.03□□□□□ -1.6
VPS50-207ENST00000458530 NDUFS5O43920 106 aa5.03□□□□□ -1.6
VPS50-207ENST00000458530 C5orf47Q569G3 176 aa5.03□□□□□ -1.6
VPS50-207ENST00000458530 FP248Q71RG6 208 aaPredicted RBP5.03□□□□□ -1.6
VPS50-207ENST00000458530 MP68P56378 58 aa5.02□□□□□ -1.61
VPS50-207ENST00000458530 H3BPC8 53 aa5.01□□□□□ -1.61
VPS50-207ENST00000458530 CCDC179H3BU77 68 aa5.01□□□□□ -1.61
VPS50-207ENST00000458530 LPAP08519 4548 aa5.01□□□□□ -1.61
VPS50-207ENST00000458530 TRAV22A0A0B4J277 110 aa4.99□□□□□ -1.61
VPS50-207ENST00000458530 NDUFC1O43677 76 aa4.99□□□□□ -1.61
VPS50-207ENST00000458530 NOTCH2NLQ7Z3S9 236 aa4.99□□□□□ -1.61
VPS50-207ENST00000458530 C20orf197Q8N268 126 aa4.99□□□□□ -1.61
VPS50-207ENST00000458530 KLKP1Q107X0 134 aa4.98□□□□□ -1.61
VPS50-207ENST00000458530 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
VPS50-207ENST00000458530 H0Y9P7 68 aa4.97□□□□□ -1.61
VPS50-207ENST00000458530 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
VPS50-207ENST00000458530 RETNLBQ9BQ08 111 aa4.96□□□□□ -1.62
VPS50-207ENST00000458530 A0A0U1RQV1 116 aa4.95□□□□□ -1.62
VPS50-207ENST00000458530 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
VPS50-207ENST00000458530 IGLV7-46A0A075B6I9 117 aa4.93□□□□□ -1.62
VPS50-207ENST00000458530 LINC00208Q96KT6 92 aa4.93□□□□□ -1.62
VPS50-207ENST00000458530 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
VPS50-207ENST00000458530 LOC101927531A0A1B0GV80 90 aa4.92□□□□□ -1.62
VPS50-207ENST00000458530 C9orf92A6NGG3 77 aa4.92□□□□□ -1.62
VPS50-207ENST00000458530 TMEM258P61165 79 aa4.92□□□□□ -1.62
VPS50-207ENST00000458530 C1orf64Q8NEQ6 169 aa4.92□□□□□ -1.62
VPS50-207ENST00000458530 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
VPS50-207ENST00000458530 A8MUU9 505 aa4.9□□□□□ -1.63
VPS50-207ENST00000458530 ATP5EP56381 51 aaPredicted RBP4.9□□□□□ -1.63
VPS50-207ENST00000458530 PRR4Q16378 134 aa4.9□□□□□ -1.63
VPS50-207ENST00000458530 Q75L30 129 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms