RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 A0A087WSZ3 146 aa7.27□□□□□ -1.25
SYNE2-207ENST00000458046 KRTAP11-1Q8IUC1 163 aa7.27□□□□□ -1.25
SYNE2-207ENST00000458046 UBE2DNLQ8IWF7 75 aa7.27□□□□□ -1.25
SYNE2-207ENST00000458046 K7ERS5 55 aa7.26□□□□□ -1.25
SYNE2-207ENST00000458046 DNAH7Q8WXX0 4024 aa7.26□□□□□ -1.25
SYNE2-207ENST00000458046 CNBPP62633 177 aaKnown RBP7.25□□□□□ -1.25
SYNE2-207ENST00000458046 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
SYNE2-207ENST00000458046 RPL37AP61513 92 aaKnown RBP7.24□□□□□ -1.25
SYNE2-207ENST00000458046 MOBPQ13875 183 aa7.24□□□□□ -1.25
SYNE2-207ENST00000458046 Q5VV11 94 aa7.24□□□□□ -1.25
SYNE2-207ENST00000458046 WFDC13Q8IUB5 93 aa7.24□□□□□ -1.25
SYNE2-207ENST00000458046 P0C880 135 aa7.23□□□□□ -1.25
SYNE2-207ENST00000458046 APLNQ9ULZ1 77 aa7.21□□□□□ -1.26
SYNE2-207ENST00000458046 PLECQ15149 4684 aaKnown RBP7.2□□□□□ -1.26
SYNE2-207ENST00000458046 LRCOL1A6NCL2 159 aa7.2□□□□□ -1.26
SYNE2-207ENST00000458046 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
SYNE2-207ENST00000458046 A8MUU9 505 aa7.19□□□□□ -1.26
SYNE2-207ENST00000458046 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
SYNE2-207ENST00000458046 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
SYNE2-207ENST00000458046 PANO1I0J062 215 aa7.17□□□□□ -1.26
SYNE2-207ENST00000458046 C14orf177Q52M58 125 aa7.17□□□□□ -1.26
SYNE2-207ENST00000458046 C9orf163Q8N9P6 203 aa7.16□□□□□ -1.26
SYNE2-207ENST00000458046 CYP4F30PQ9H0H9 118 aa7.15□□□□□ -1.26
SYNE2-207ENST00000458046 CHKB-CPT1BH3BT56 60 aa7.14□□□□□ -1.27
SYNE2-207ENST00000458046 Q8N1X5 172 aa7.14□□□□□ -1.27
SYNE2-207ENST00000458046 UBR4Q5T4S7 5183 aa7.14□□□□□ -1.27
SYNE2-207ENST00000458046 SPRR1BP22528 89 aa7.13□□□□□ -1.27
SYNE2-207ENST00000458046 LINC00208Q96KT6 92 aa7.13□□□□□ -1.27
SYNE2-207ENST00000458046 CASC2Q6XLA1 102 aa7.13□□□□□ -1.27
SYNE2-207ENST00000458046 KIAA1109Q2LD37 5005 aa7.13□□□□□ -1.27
SYNE2-207ENST00000458046 KRTAP29-1A8MX34 341 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-207ENST00000458046 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
SYNE2-207ENST00000458046 NBDYA0A0U1RRE5 68 aa7.12□□□□□ -1.27
SYNE2-207ENST00000458046 LCE2BO14633 110 aa7.1□□□□□ -1.27
SYNE2-207ENST00000458046 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
SYNE2-207ENST00000458046 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
SYNE2-207ENST00000458046 H0Y9P7 68 aa7.08□□□□□ -1.28
SYNE2-207ENST00000458046 Q6ZRN7 208 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-207ENST00000458046 KRTAP13-1Q8IUC0 172 aa7.07□□□□□ -1.28
SYNE2-207ENST00000458046 NDUFB1O75438 58 aa7.06□□□□□ -1.28
SYNE2-207ENST00000458046 STARD9Q9P2P6 4700 aa7.05□□□□□ -1.28
SYNE2-207ENST00000458046 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
SYNE2-207ENST00000458046 SPACA4Q8TDM5 124 aa7.04□□□□□ -1.28
SYNE2-207ENST00000458046 MMP24-AS1A0A0U1RRL7 71 aa7.03□□□□□ -1.28
SYNE2-207ENST00000458046 ANAPC11Q9NYG5 84 aa7.03□□□□□ -1.28
SYNE2-207ENST00000458046 HECTD4Q9Y4D8 3996 aa7.02□□□□□ -1.29
SYNE2-207ENST00000458046 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
SYNE2-207ENST00000458046 NUPR2A6NF83 97 aa7.02□□□□□ -1.29
SYNE2-207ENST00000458046 DNAH2Q9P225 4427 aa7.01□□□□□ -1.29
SYNE2-207ENST00000458046 DNAH8Q96JB1 4490 aa7.01□□□□□ -1.29
SYNE2-207ENST00000458046 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
SYNE2-207ENST00000458046 KMT2AQ03164 3969 aa7□□□□□ -1.29
SYNE2-207ENST00000458046 Q96NJ1 140 aa7□□□□□ -1.29
SYNE2-207ENST00000458046 A0A087WTM6 91 aa7□□□□□ -1.29
SYNE2-207ENST00000458046 CSAG1Q6PB30 78 aa7□□□□□ -1.29
SYNE2-207ENST00000458046 ALMS1Q8TCU4 4167 aa6.99□□□□□ -1.29
SYNE2-207ENST00000458046 PSORS1C2Q9UIG4 136 aa6.99□□□□□ -1.29
SYNE2-207ENST00000458046 H3BPC8 53 aa6.98□□□□□ -1.29
SYNE2-207ENST00000458046 Q6ZR54 194 aa6.98□□□□□ -1.29
SYNE2-207ENST00000458046 NDUFAF8A1L188 74 aa6.97□□□□□ -1.29
SYNE2-207ENST00000458046 LIMD2Q9BT23 127 aa6.97□□□□□ -1.29
SYNE2-207ENST00000458046 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-207ENST00000458046 RTL8CO15255 209 aa6.96□□□□□ -1.29
SYNE2-207ENST00000458046 ABCA13Q86UQ4 5058 aa6.96□□□□□ -1.3
SYNE2-207ENST00000458046 LINC00483Q53H64 154 aa6.96□□□□□ -1.3
SYNE2-207ENST00000458046 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.3
SYNE2-207ENST00000458046 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
SYNE2-207ENST00000458046 PCOTHQ58A44 107 aa6.95□□□□□ -1.3
SYNE2-207ENST00000458046 ZNF861PO60384 105 aa6.92□□□□□ -1.3
SYNE2-207ENST00000458046 IGLV7-46A0A075B6I9 117 aa6.9□□□□□ -1.31
SYNE2-207ENST00000458046 PRR15LQ9BU68 103 aa6.9□□□□□ -1.31
SYNE2-207ENST00000458046 TP53AIP1Q9HCN2 124 aa6.9□□□□□ -1.31
SYNE2-207ENST00000458046 PLAC8Q9NZF1 115 aa6.9□□□□□ -1.31
SYNE2-207ENST00000458046 SPINK6Q6UWN8 80 aa6.89□□□□□ -1.31
SYNE2-207ENST00000458046 LOC101927531A0A1B0GV80 90 aa6.89□□□□□ -1.31
SYNE2-207ENST00000458046 COA5Q86WW8 74 aa6.88□□□□□ -1.31
SYNE2-207ENST00000458046 MRPL34Q9BQ48 92 aaKnown RBP6.87□□□□□ -1.31
SYNE2-207ENST00000458046 DNAH6Q9C0G6 4158 aa6.86□□□□□ -1.31
SYNE2-207ENST00000458046 IGLV7-43P04211 117 aa6.83□□□□□ -1.32
SYNE2-207ENST00000458046 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
SYNE2-207ENST00000458046 DNAH11Q96DT5 4516 aa6.83□□□□□ -1.32
SYNE2-207ENST00000458046 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-207ENST00000458046 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
SYNE2-207ENST00000458046 LY6G6CO95867 125 aa6.81□□□□□ -1.32
SYNE2-207ENST00000458046 Q5W150 140 aa6.8□□□□□ -1.32
SYNE2-207ENST00000458046 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
SYNE2-207ENST00000458046 DNAH5Q8TE73 4624 aa6.79□□□□□ -1.32
SYNE2-207ENST00000458046 HRES1P13985 223 aa6.77□□□□□ -1.33
SYNE2-207ENST00000458046 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
SYNE2-207ENST00000458046 LRP1BQ9NZR2 4599 aa6.75□□□□□ -1.33
SYNE2-207ENST00000458046 HERC1Q15751 4861 aa6.74□□□□□ -1.33
SYNE2-207ENST00000458046 SSBP3-AS1Q7Z2R9 100 aa6.73□□□□□ -1.33
SYNE2-207ENST00000458046 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
SYNE2-207ENST00000458046 KRTAP25-1Q3LHN0 102 aa6.7□□□□□ -1.34
SYNE2-207ENST00000458046 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
SYNE2-207ENST00000458046 DYNC1H1Q14204 4646 aaKnown RBP6.7□□□□□ -1.34
SYNE2-207ENST00000458046 TYMSOSQ8TAI1 123 aa6.69□□□□□ -1.34
SYNE2-207ENST00000458046 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
SYNE2-207ENST00000458046 KRTAP10-1P60331 282 aa6.66□□□□□ -1.34
SYNE2-207ENST00000458046 PKD1P98161 4303 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms