RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
SNHG17-208ENST00000456953 LIMD2Q9BT23 127 aa7.04□□□□□ -1.28
SNHG17-208ENST00000456953 LOC110117498A0A087WWA1 95 aa7.03□□□□□ -1.28
SNHG17-208ENST00000456953 TRBV7-7A0A0K0K1E9 115 aa7.03□□□□□ -1.28
SNHG17-208ENST00000456953 A0A1W2PNM2 257 aa7.02□□□□□ -1.29
SNHG17-208ENST00000456953 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
SNHG17-208ENST00000456953 Q6Q795 121 aa7.01□□□□□ -1.29
SNHG17-208ENST00000456953 Q6ZQT0 140 aa7.01□□□□□ -1.29
SNHG17-208ENST00000456953 C21orf62-AS1Q17RA5 79 aa7□□□□□ -1.29
SNHG17-208ENST00000456953 ETDBQ3ZM63 59 aa7□□□□□ -1.29
SNHG17-208ENST00000456953 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
SNHG17-208ENST00000456953 A0A087WSZ3 146 aa6.99□□□□□ -1.29
SNHG17-208ENST00000456953 Q5XG85 94 aa6.98□□□□□ -1.29
SNHG17-208ENST00000456953 SS18L2Q9UHA2 77 aa6.98□□□□□ -1.29
SNHG17-208ENST00000456953 RPL37P61927 97 aaKnown RBP6.96□□□□□ -1.3
SNHG17-208ENST00000456953 A0A1B0GW54 56 aa6.94□□□□□ -1.3
SNHG17-208ENST00000456953 C1orf195Q5TG92 126 aa6.91□□□□□ -1.3
SNHG17-208ENST00000456953 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
SNHG17-208ENST00000456953 NREPQ16612 68 aa6.87□□□□□ -1.31
SNHG17-208ENST00000456953 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
SNHG17-208ENST00000456953 IGKV4-1P06312 121 aa6.85□□□□□ -1.31
SNHG17-208ENST00000456953 DEFB116Q30KQ4 102 aa6.85□□□□□ -1.31
SNHG17-208ENST00000456953 SIGMAR1Q99720 223 aa6.85□□□□□ -1.31
SNHG17-208ENST00000456953 LINC00472Q9H8W2 130 aa6.85□□□□□ -1.31
SNHG17-208ENST00000456953 Q96NJ1 140 aa6.84□□□□□ -1.31
SNHG17-208ENST00000456953 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
SNHG17-208ENST00000456953 J3KT08 172 aa6.83□□□□□ -1.32
SNHG17-208ENST00000456953 LINC00846Q9NV44 126 aa6.83□□□□□ -1.32
SNHG17-208ENST00000456953 J3QR89 54 aa6.82□□□□□ -1.32
SNHG17-208ENST00000456953 ACYP1P07311 99 aa6.82□□□□□ -1.32
SNHG17-208ENST00000456953 Q6ZVQ6 151 aa6.82□□□□□ -1.32
SNHG17-208ENST00000456953 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
SNHG17-208ENST00000456953 BPY2O14599 106 aa6.79□□□□□ -1.32
SNHG17-208ENST00000456953 LCE2BO14633 110 aa6.78□□□□□ -1.32
SNHG17-208ENST00000456953 NDUFB1O75438 58 aa6.78□□□□□ -1.32
SNHG17-208ENST00000456953 ATP11AUNQ6ZP68 121 aa6.76□□□□□ -1.33
SNHG17-208ENST00000456953 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
SNHG17-208ENST00000456953 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
SNHG17-208ENST00000456953 A8MWP4 228 aa6.75□□□□□ -1.33
SNHG17-208ENST00000456953 MT2AP02795 61 aa6.75□□□□□ -1.33
SNHG17-208ENST00000456953 IGKV3D-7A0A0C4DH55 119 aa6.72□□□□□ -1.33
SNHG17-208ENST00000456953 DSCR10P59022 87 aa6.72□□□□□ -1.33
SNHG17-208ENST00000456953 LINC00313P59037 77 aa6.72□□□□□ -1.33
SNHG17-208ENST00000456953 Q75L30 129 aa6.72□□□□□ -1.33
SNHG17-208ENST00000456953 C8orf87E5RJ46 101 aa6.71□□□□□ -1.34
SNHG17-208ENST00000456953 K7ERU9 68 aa6.71□□□□□ -1.34
SNHG17-208ENST00000456953 PRR15Q8IV56 129 aa6.71□□□□□ -1.34
SNHG17-208ENST00000456953 MT1FP04733 61 aa6.7□□□□□ -1.34
SNHG17-208ENST00000456953 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
SNHG17-208ENST00000456953 K7EQZ3 153 aa6.69□□□□□ -1.34
SNHG17-208ENST00000456953 CXCL6P80162 114 aa6.69□□□□□ -1.34
SNHG17-208ENST00000456953 ATP5EP2Q5VTU8 51 aa6.68□□□□□ -1.34
SNHG17-208ENST00000456953 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
SNHG17-208ENST00000456953 LINC00643Q86TS7 51 aa6.68□□□□□ -1.34
SNHG17-208ENST00000456953 Q8N9L7 120 aa6.68□□□□□ -1.34
SNHG17-208ENST00000456953 C8orf17Q9NRJ1 99 aa6.67□□□□□ -1.34
SNHG17-208ENST00000456953 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
SNHG17-208ENST00000456953 KRTAP6-3Q3LI67 103 aa6.64□□□□□ -1.35
SNHG17-208ENST00000456953 KRTAP19-6Q3LI70 58 aa6.64□□□□□ -1.35
SNHG17-208ENST00000456953 NEBP20929 6669 aa6.61□□□□□ -1.35
SNHG17-208ENST00000456953 MMP24-AS1A0A0U1RRL7 71 aa6.61□□□□□ -1.35
SNHG17-208ENST00000456953 hDV103S1A0JD37 113 aa6.61□□□□□ -1.35
SNHG17-208ENST00000456953 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
SNHG17-208ENST00000456953 HIST1H4AP62805 103 aaKnown RBP6.61□□□□□ -1.35
SNHG17-208ENST00000456953 CASC2Q6XLA1 102 aa6.6□□□□□ -1.35
SNHG17-208ENST00000456953 WFDC13Q8IUB5 93 aa6.6□□□□□ -1.35
SNHG17-208ENST00000456953 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
SNHG17-208ENST00000456953 HCG22E2RYF7 251 aa6.59□□□□□ -1.35
SNHG17-208ENST00000456953 TMEM254Q8TBM7 123 aa6.59□□□□□ -1.35
SNHG17-208ENST00000456953 A8MUU9 505 aa6.58□□□□□ -1.36
SNHG17-208ENST00000456953 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
SNHG17-208ENST00000456953 NDUFS5O43920 106 aa6.56□□□□□ -1.36
SNHG17-208ENST00000456953 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
SNHG17-208ENST00000456953 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
SNHG17-208ENST00000456953 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
SNHG17-208ENST00000456953 A0A087WVE0 104 aa6.52□□□□□ -1.37
SNHG17-208ENST00000456953 MT-ATP8P03928 68 aa6.51□□□□□ -1.37
SNHG17-208ENST00000456953 ZCCHC13Q8WW36 166 aaKnown RBP6.49□□□□□ -1.37
SNHG17-208ENST00000456953 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
SNHG17-208ENST00000456953 RBM12B-AS1Q9P1G2 102 aa6.48□□□□□ -1.37
SNHG17-208ENST00000456953 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
SNHG17-208ENST00000456953 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.38
SNHG17-208ENST00000456953 TP53AIP1Q9HCN2 124 aa6.44□□□□□ -1.38
SNHG17-208ENST00000456953 SCGB1A1P11684 91 aa6.43□□□□□ -1.38
SNHG17-208ENST00000456953 HRES1P13985 223 aa6.42□□□□□ -1.38
SNHG17-208ENST00000456953 Q5W150 140 aa6.4□□□□□ -1.38
SNHG17-208ENST00000456953 KRTAP20-1Q3LI63 56 aa6.39□□□□□ -1.39
SNHG17-208ENST00000456953 UQCRQO14949 82 aa6.38□□□□□ -1.39
SNHG17-208ENST00000456953 FAM236AA0A1B0GUQ0 79 aa6.37□□□□□ -1.39
SNHG17-208ENST00000456953 FAM236BA0A1B0GV22 79 aa6.37□□□□□ -1.39
SNHG17-208ENST00000456953 SPINK7P58062 85 aa6.36□□□□□ -1.39
SNHG17-208ENST00000456953 TRAV22A0A0B4J277 110 aa6.35□□□□□ -1.39
SNHG17-208ENST00000456953 IGKV2D-30A0A075B6S6 120 aa6.34□□□□□ -1.39
SNHG17-208ENST00000456953 IGKV2-30P06310 120 aa6.34□□□□□ -1.39
SNHG17-208ENST00000456953 C7orf65Q6ZTY9 151 aa6.33□□□□□ -1.4
SNHG17-208ENST00000456953 OCR1Q9BZK8 76 aa6.33□□□□□ -1.4
SNHG17-208ENST00000456953 H0Y9P7 68 aa6.31□□□□□ -1.4
SNHG17-208ENST00000456953 ATOX1O00244 68 aa6.31□□□□□ -1.4
SNHG17-208ENST00000456953 SMIM20Q8N5G0 67 aa6.31□□□□□ -1.4
SNHG17-208ENST00000456953 MP68P56378 58 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms