RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 TP53AIP1Q9HCN2 124 aa10.38□□□□□ -0.75
CCDC144A-210ENST00000456009 CDK2AP2O75956 126 aa10.37□□□□□ -0.75
CCDC144A-210ENST00000456009 KRTAP10-2P60368 255 aa10.37□□□□□ -0.75
CCDC144A-210ENST00000456009 SPINK6Q6UWN8 80 aa10.37□□□□□ -0.75
CCDC144A-210ENST00000456009 CIRBP-AS1Q8TBR5 109 aa10.36□□□□□ -0.75
CCDC144A-210ENST00000456009 DNAH5Q8TE73 4624 aa10.36□□□□□ -0.75
CCDC144A-210ENST00000456009 MRPL34Q9BQ48 92 aaKnown RBP10.35□□□□□ -0.75
CCDC144A-210ENST00000456009 CD164Q04900 197 aa10.34□□□□□ -0.75
CCDC144A-210ENST00000456009 IGLV7-46A0A075B6I9 117 aa10.33□□□□□ -0.76
CCDC144A-210ENST00000456009 A8MUN3 132 aa10.29□□□□□ -0.76
CCDC144A-210ENST00000456009 COA5Q86WW8 74 aa10.27□□□□□ -0.77
CCDC144A-210ENST00000456009 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
CCDC144A-210ENST00000456009 Q5W150 140 aa10.26□□□□□ -0.77
CCDC144A-210ENST00000456009 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
CCDC144A-210ENST00000456009 SSBP3-AS1Q7Z2R9 100 aa10.23□□□□□ -0.77
CCDC144A-210ENST00000456009 HYDINQ4G0P3 5121 aa10.23□□□□□ -0.77
CCDC144A-210ENST00000456009 KRTAP10-1P60331 282 aa10.22□□□□□ -0.77
CCDC144A-210ENST00000456009 Q5VV11 94 aa10.22□□□□□ -0.77
CCDC144A-210ENST00000456009 PKD1P98161 4303 aa10.22□□□□□ -0.77
CCDC144A-210ENST00000456009 V9GYY9 64 aa10.21□□□□□ -0.77
CCDC144A-210ENST00000456009 KRTAP13-2Q52LG2 175 aa10.2□□□□□ -0.78
CCDC144A-210ENST00000456009 KRTAP13-3Q3SY46 172 aa10.18□□□□□ -0.78
CCDC144A-210ENST00000456009 FAT2Q9NYQ8 4349 aa10.18□□□□□ -0.78
CCDC144A-210ENST00000456009 A8MU10 97 aa10.16□□□□□ -0.78
CCDC144A-210ENST00000456009 Q6ZSA8 131 aa10.16□□□□□ -0.78
CCDC144A-210ENST00000456009 LIMD2Q9BT23 127 aa10.15□□□□□ -0.79
CCDC144A-210ENST00000456009 PRR15LQ9BU68 103 aa10.15□□□□□ -0.79
CCDC144A-210ENST00000456009 HRES1P13985 223 aa10.14□□□□□ -0.79
CCDC144A-210ENST00000456009 C1orf195Q5TG92 126 aa10.13□□□□□ -0.79
CCDC144A-210ENST00000456009 VPS13BQ7Z7G8 4022 aa10.13□□□□□ -0.79
CCDC144A-210ENST00000456009 LOC101927531A0A1B0GV80 90 aa10.12□□□□□ -0.79
CCDC144A-210ENST00000456009 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
CCDC144A-210ENST00000456009 LINC00313P59037 77 aa10.1□□□□□ -0.79
CCDC144A-210ENST00000456009 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
CCDC144A-210ENST00000456009 C8orf87E5RJ46 101 aa10.09□□□□□ -0.79
CCDC144A-210ENST00000456009 RETNLBQ9BQ08 111 aa10.09□□□□□ -0.79
CCDC144A-210ENST00000456009 KRTAP1-4P0C5Y4 121 aa10.08□□□□□ -0.8
CCDC144A-210ENST00000456009 Q75L30 129 aa10.01□□□□□ -0.81
CCDC144A-210ENST00000456009 PRR26Q8N8Z3 221 aa10.01□□□□□ -0.81
CCDC144A-210ENST00000456009 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
CCDC144A-210ENST00000456009 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
CCDC144A-210ENST00000456009 PKHD1P08F94 4074 aa9.99□□□□□ -0.81
CCDC144A-210ENST00000456009 PLA2G1BP04054 148 aaKnown RBP9.98□□□□□ -0.81
CCDC144A-210ENST00000456009 FAM229AH3BQW9 127 aa9.98□□□□□ -0.81
CCDC144A-210ENST00000456009 LCA10Q71F78 164 aa9.98□□□□□ -0.81
CCDC144A-210ENST00000456009 A6NED7 52 aa9.95□□□□□ -0.82
CCDC144A-210ENST00000456009 IGKV2-30P06310 120 aa9.93□□□□□ -0.82
CCDC144A-210ENST00000456009 ACYP2P14621 99 aa9.93□□□□□ -0.82
CCDC144A-210ENST00000456009 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
CCDC144A-210ENST00000456009 DMAC1Q96GE9 116 aa9.9□□□□□ -0.82
CCDC144A-210ENST00000456009 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
CCDC144A-210ENST00000456009 SPINK7P58062 85 aa9.88□□□□□ -0.83
CCDC144A-210ENST00000456009 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
CCDC144A-210ENST00000456009 SPTSSBQ8NFR3 76 aa9.86□□□□□ -0.83
CCDC144A-210ENST00000456009 IGKV2D-30A0A075B6S6 120 aa9.85□□□□□ -0.83
CCDC144A-210ENST00000456009 SPINK1P00995 79 aa9.84□□□□□ -0.83
CCDC144A-210ENST00000456009 SACSQ9NZJ4 4579 aa9.84□□□□□ -0.83
CCDC144A-210ENST00000456009 SMR3BP02814 79 aaPredicted RBP9.82□□□□□ -0.84
CCDC144A-210ENST00000456009 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
CCDC144A-210ENST00000456009 ATP11AUNQ6ZP68 121 aa9.78□□□□□ -0.84
CCDC144A-210ENST00000456009 DYNC1H1Q14204 4646 aaKnown RBP9.76□□□□□ -0.85
CCDC144A-210ENST00000456009 LINC00304Q8N9R0 145 aa9.76□□□□□ -0.85
CCDC144A-210ENST00000456009 FAT1Q14517 4588 aa9.75□□□□□ -0.85
CCDC144A-210ENST00000456009 C7orf65Q6ZTY9 151 aa9.7□□□□□ -0.86
CCDC144A-210ENST00000456009 A6NN06 94 aa9.67□□□□□ -0.86
CCDC144A-210ENST00000456009 A0A1B0GU69 56 aa9.66□□□□□ -0.86
CCDC144A-210ENST00000456009 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
CCDC144A-210ENST00000456009 KRTAP21-3Q3LHN1 58 aa9.65□□□□□ -0.86
CCDC144A-210ENST00000456009 KRTAP10-4P60372 401 aaPredicted RBP9.65□□□□□ -0.87
CCDC144A-210ENST00000456009 A0A1B0GVY2 172 aa9.64□□□□□ -0.87
CCDC144A-210ENST00000456009 C9orf92A6NGG3 77 aa9.64□□□□□ -0.87
CCDC144A-210ENST00000456009 APOBP04114 4563 aaKnown RBP9.64□□□□□ -0.87
CCDC144A-210ENST00000456009 Q8N1X5 172 aa9.64□□□□□ -0.87
CCDC144A-210ENST00000456009 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
CCDC144A-210ENST00000456009 SEC61GP60059 68 aa9.59□□□□□ -0.87
CCDC144A-210ENST00000456009 KTN1-AS1Q86SY8 53 aa9.59□□□□□ -0.87
CCDC144A-210ENST00000456009 A8MUU9 505 aa9.53□□□□□ -0.88
CCDC144A-210ENST00000456009 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
CCDC144A-210ENST00000456009 SPATA8Q6RVD6 105 aa9.5□□□□□ -0.89
CCDC144A-210ENST00000456009 KMT2CQ8NEZ4 4911 aaKnown RBP9.49□□□□□ -0.89
CCDC144A-210ENST00000456009 RYR2Q92736 4967 aa9.47□□□□□ -0.89
CCDC144A-210ENST00000456009 UQCR11O14957 56 aa9.47□□□□□ -0.89
CCDC144A-210ENST00000456009 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.9
CCDC144A-210ENST00000456009 KRTAP3-1Q9BYR8 98 aa9.46□□□□□ -0.9
CCDC144A-210ENST00000456009 FLG2Q5D862 2391 aaPredicted RBP9.42□□□□□ -0.9
CCDC144A-210ENST00000456009 LRP1Q07954 4544 aaKnown RBP9.41□□□□□ -0.9
CCDC144A-210ENST00000456009 RBM12B-AS1Q9P1G2 102 aa9.37□□□□□ -0.91
CCDC144A-210ENST00000456009 TNXBP22105 4242 aa9.32□□□□□ -0.92
CCDC144A-210ENST00000456009 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
CCDC144A-210ENST00000456009 FAT3Q8TDW7 4589 aa9.31□□□□□ -0.92
CCDC144A-210ENST00000456009 PRAC1Q96KF2 57 aa9.29□□□□□ -0.92
CCDC144A-210ENST00000456009 HSPG2P98160 4391 aa9.25□□□□□ -0.93
CCDC144A-210ENST00000456009 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
CCDC144A-210ENST00000456009 H0YAA0 97 aa9.22□□□□□ -0.93
CCDC144A-210ENST00000456009 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
CCDC144A-210ENST00000456009 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.93
CCDC144A-210ENST00000456009 Q5VSD8 79 aa9.21□□□□□ -0.94
CCDC144A-210ENST00000456009 KRTAP17-1Q9BYP8 105 aa9.2□□□□□ -0.94
CCDC144A-210ENST00000456009 MYCBP2O75592 4640 aa9.2□□□□□ -0.94
CCDC144A-210ENST00000456009 A0A1B0GU33 70 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms