RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 Q6ZRN7 208 aaPredicted RBP6.03□□□□□ -1.44
CSGALNACT1-203ENST00000454498 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
CSGALNACT1-203ENST00000454498 OTOGQ6ZRI0 2925 aa5.99□□□□□ -1.45
CSGALNACT1-203ENST00000454498 HRES1P13985 223 aa5.99□□□□□ -1.45
CSGALNACT1-203ENST00000454498 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
CSGALNACT1-203ENST00000454498 KRTAP7-1Q8IUC3 87 aa5.99□□□□□ -1.45
CSGALNACT1-203ENST00000454498 FBN1P35555 2871 aaKnown RBP5.99□□□□□ -1.45
CSGALNACT1-203ENST00000454498 LINC00483Q53H64 154 aa5.99□□□□□ -1.45
CSGALNACT1-203ENST00000454498 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
CSGALNACT1-203ENST00000454498 H3BS24 57 aa5.98□□□□□ -1.45
CSGALNACT1-203ENST00000454498 A8MU10 97 aa5.97□□□□□ -1.45
CSGALNACT1-203ENST00000454498 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.45
CSGALNACT1-203ENST00000454498 PDZD2O15018 2839 aa5.96□□□□□ -1.45
CSGALNACT1-203ENST00000454498 AKAP9Q99996 3911 aa5.96□□□□□ -1.45
CSGALNACT1-203ENST00000454498 ZCCHC13Q8WW36 166 aaKnown RBP5.95□□□□□ -1.46
CSGALNACT1-203ENST00000454498 VWFP04275 2813 aa5.95□□□□□ -1.46
CSGALNACT1-203ENST00000454498 Q1T7F1 81 aa5.94□□□□□ -1.46
CSGALNACT1-203ENST00000454498 A0A087X002 238 aa5.94□□□□□ -1.46
CSGALNACT1-203ENST00000454498 Q6ZSA8 131 aa5.94□□□□□ -1.46
CSGALNACT1-203ENST00000454498 Q5VSD8 79 aa5.93□□□□□ -1.46
CSGALNACT1-203ENST00000454498 Q5W150 140 aa5.93□□□□□ -1.46
CSGALNACT1-203ENST00000454498 TENM2Q9NT68 2774 aa5.91□□□□□ -1.46
CSGALNACT1-203ENST00000454498 TGP01266 2768 aa5.9□□□□□ -1.47
CSGALNACT1-203ENST00000454498 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
CSGALNACT1-203ENST00000454498 LCA10Q71F78 164 aa5.89□□□□□ -1.47
CSGALNACT1-203ENST00000454498 KRTAP29-1A8MX34 341 aaPredicted RBP5.89□□□□□ -1.47
CSGALNACT1-203ENST00000454498 Q5VV11 94 aa5.88□□□□□ -1.47
CSGALNACT1-203ENST00000454498 SPINK7P58062 85 aa5.88□□□□□ -1.47
CSGALNACT1-203ENST00000454498 KRTAP21-3Q3LHN1 58 aa5.88□□□□□ -1.47
CSGALNACT1-203ENST00000454498 KRTAP13-1Q8IUC0 172 aa5.85□□□□□ -1.47
CSGALNACT1-203ENST00000454498 TRRAPQ9Y4A5 3859 aa5.84□□□□□ -1.47
CSGALNACT1-203ENST00000454498 NOTCH2NLQ7Z3S9 236 aa5.84□□□□□ -1.47
CSGALNACT1-203ENST00000454498 A0A0D9SG42 100 aa5.84□□□□□ -1.48
CSGALNACT1-203ENST00000454498 LINC01554Q52M75 96 aa5.84□□□□□ -1.48
CSGALNACT1-203ENST00000454498 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.48
CSGALNACT1-203ENST00000454498 LINC01558Q9Y6Z2 57 aa5.81□□□□□ -1.48
CSGALNACT1-203ENST00000454498 A0A1B0GU33 70 aa5.79□□□□□ -1.48
CSGALNACT1-203ENST00000454498 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
CSGALNACT1-203ENST00000454498 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
CSGALNACT1-203ENST00000454498 Q75L30 129 aa5.78□□□□□ -1.48
CSGALNACT1-203ENST00000454498 ASB16-AS1Q495Z4 193 aa5.78□□□□□ -1.48
CSGALNACT1-203ENST00000454498 CSAG1Q6PB30 78 aa5.76□□□□□ -1.49
CSGALNACT1-203ENST00000454498 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
CSGALNACT1-203ENST00000454498 CRIPTQ9P021 101 aa5.75□□□□□ -1.49
CSGALNACT1-203ENST00000454498 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
CSGALNACT1-203ENST00000454498 S4R3F8 94 aa5.72□□□□□ -1.49
CSGALNACT1-203ENST00000454498 SRRM2Q9UQ35 2752 aaKnown RBP5.71□□□□□ -1.49
CSGALNACT1-203ENST00000454498 ANK3Q12955 4377 aaKnown RBP5.71□□□□□ -1.49
CSGALNACT1-203ENST00000454498 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.49
CSGALNACT1-203ENST00000454498 ADM2Q7Z4H4 148 aa5.69□□□□□ -1.5
CSGALNACT1-203ENST00000454498 A6NN06 94 aa5.68□□□□□ -1.5
CSGALNACT1-203ENST00000454498 M0R2T5 61 aa5.68□□□□□ -1.5
CSGALNACT1-203ENST00000454498 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
CSGALNACT1-203ENST00000454498 R4GN34 69 aa5.61□□□□□ -1.51
CSGALNACT1-203ENST00000454498 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
CSGALNACT1-203ENST00000454498 FBN3Q75N90 2809 aa5.56□□□□□ -1.52
CSGALNACT1-203ENST00000454498 H1FX-AS1Q4G0G2 97 aa5.54□□□□□ -1.52
CSGALNACT1-203ENST00000454498 RPL37P61927 97 aaKnown RBP5.53□□□□□ -1.52
CSGALNACT1-203ENST00000454498 A8MUU9 505 aa5.51□□□□□ -1.53
CSGALNACT1-203ENST00000454498 M0QZ58 72 aa5.51□□□□□ -1.53
CSGALNACT1-203ENST00000454498 ANK2Q01484 3957 aa5.51□□□□□ -1.53
CSGALNACT1-203ENST00000454498 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
CSGALNACT1-203ENST00000454498 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
CSGALNACT1-203ENST00000454498 CSMD3Q7Z407 3707 aa5.48□□□□□ -1.53
CSGALNACT1-203ENST00000454498 COL7A1Q02388 2944 aa5.46□□□□□ -1.53
CSGALNACT1-203ENST00000454498 MEGF8Q7Z7M0 2845 aa5.42□□□□□ -1.54
CSGALNACT1-203ENST00000454498 ROMO1P60602 79 aa5.4□□□□□ -1.55
CSGALNACT1-203ENST00000454498 XP32Q5T750 250 aa5.39□□□□□ -1.55
CSGALNACT1-203ENST00000454498 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
CSGALNACT1-203ENST00000454498 A0A1B0GVY2 172 aa5.35□□□□□ -1.55
CSGALNACT1-203ENST00000454498 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
CSGALNACT1-203ENST00000454498 LYSTQ99698 3801 aa5.34□□□□□ -1.56
CSGALNACT1-203ENST00000454498 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
CSGALNACT1-203ENST00000454498 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
CSGALNACT1-203ENST00000454498 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
CSGALNACT1-203ENST00000454498 CMYA5Q8N3K9 4069 aa5.28□□□□□ -1.56
CSGALNACT1-203ENST00000454498 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
CSGALNACT1-203ENST00000454498 DNHD1Q96M86 4753 aa5.27□□□□□ -1.57
CSGALNACT1-203ENST00000454498 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
CSGALNACT1-203ENST00000454498 NDUFAF8A1L188 74 aa5.22□□□□□ -1.57
CSGALNACT1-203ENST00000454498 A0A0A0MQY5 61 aa5.18□□□□□ -1.58
CSGALNACT1-203ENST00000454498 DNAH10Q8IVF4 4471 aa5.18□□□□□ -1.58
CSGALNACT1-203ENST00000454498 DNAH7Q8WXX0 4024 aa5.14□□□□□ -1.59
CSGALNACT1-203ENST00000454498 HUWE1Q7Z6Z7 4374 aaKnown RBP5.14□□□□□ -1.59
CSGALNACT1-203ENST00000454498 PRKDCP78527 4128 aaKnown RBP5.14□□□□□ -1.59
CSGALNACT1-203ENST00000454498 H0YAA0 97 aa5.13□□□□□ -1.59
CSGALNACT1-203ENST00000454498 P0C880 135 aa5.1□□□□□ -1.59
CSGALNACT1-203ENST00000454498 PLECQ15149 4684 aaKnown RBP5.07□□□□□ -1.6
CSGALNACT1-203ENST00000454498 TNP1P09430 55 aa5.06□□□□□ -1.6
CSGALNACT1-203ENST00000454498 DNAH9Q9NYC9 4486 aa5.06□□□□□ -1.6
CSGALNACT1-203ENST00000454498 DNAH3Q8TD57 4116 aa5.04□□□□□ -1.6
CSGALNACT1-203ENST00000454498 STARD9Q9P2P6 4700 aa5.03□□□□□ -1.6
CSGALNACT1-203ENST00000454498 KMT2AQ03164 3969 aa5.01□□□□□ -1.61
CSGALNACT1-203ENST00000454498 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
CSGALNACT1-203ENST00000454498 KRTAP10-10P60014 251 aa4.99□□□□□ -1.61
CSGALNACT1-203ENST00000454498 KRTAP3-1Q9BYR8 98 aa4.98□□□□□ -1.61
CSGALNACT1-203ENST00000454498 DNAH1Q9P2D7 4330 aa4.96□□□□□ -1.62
CSGALNACT1-203ENST00000454498 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
CSGALNACT1-203ENST00000454498 KRTAP10-4P60372 401 aaPredicted RBP4.93□□□□□ -1.62
CSGALNACT1-203ENST00000454498 PP632Q6XCG6 107 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms