RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 Q5XG85 94 aa3.08□□□□□ -1.92
HLA-DPA3-207ENST00000454398 KRTAP19-1Q8IUB9 90 aa3.08□□□□□ -1.92
HLA-DPA3-207ENST00000454398 COPS9Q8WXC6 57 aa3.08□□□□□ -1.92
HLA-DPA3-207ENST00000454398 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
HLA-DPA3-207ENST00000454398 IGKV3D-7A0A0C4DH55 119 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 ATOX1O00244 68 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 UQCRQO14949 82 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 DNAL4O96015 105 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 MT2AP02795 61 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 MT1FP04733 61 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 BAALC-AS2P0C853 105 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 COX7CP15954 63 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 C5orf47Q569G3 176 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 IMUPQ9GZP8 106 aa3.07□□□□□ -1.92
HLA-DPA3-207ENST00000454398 hADV29S1A0JD25 119 aa3.06□□□□□ -1.92
HLA-DPA3-207ENST00000454398 TRACP01848 142 aa3.06□□□□□ -1.92
HLA-DPA3-207ENST00000454398 A0A1B0GX51 115 aa3.05□□□□□ -1.92
HLA-DPA3-207ENST00000454398 F8WEM9 126 aa3.05□□□□□ -1.92
HLA-DPA3-207ENST00000454398 Q6JHZ5 121 aa3.05□□□□□ -1.92
HLA-DPA3-207ENST00000454398 IGFL1Q6UW32 110 aa3.05□□□□□ -1.92
HLA-DPA3-207ENST00000454398 ATP11AUNQ6ZP68 121 aa3.05□□□□□ -1.92
HLA-DPA3-207ENST00000454398 Q75L30 129 aa3.05□□□□□ -1.92
HLA-DPA3-207ENST00000454398 SMIM11BQ8TCY0 68 aa3.05□□□□□ -1.92
HLA-DPA3-207ENST00000454398 SEC61GP60059 68 aa3.04□□□□□ -1.92
HLA-DPA3-207ENST00000454398 FAM218AQ96MZ4 157 aa3.04□□□□□ -1.92
HLA-DPA3-207ENST00000454398 KRTAP9-3Q9BYQ3 159 aa3.04□□□□□ -1.92
HLA-DPA3-207ENST00000454398 A0A087WVE0 104 aa3.03□□□□□ -1.92
HLA-DPA3-207ENST00000454398 TRAV13-2A0A0B4J235 113 aa3.03□□□□□ -1.92
HLA-DPA3-207ENST00000454398 TMEM258P61165 79 aa3.03□□□□□ -1.92
HLA-DPA3-207ENST00000454398 Q6ZQY7 126 aa3.03□□□□□ -1.92
HLA-DPA3-207ENST00000454398 Q96NJ1 140 aa3.03□□□□□ -1.92
HLA-DPA3-207ENST00000454398 C14orf132Q9NPU4 83 aa3.03□□□□□ -1.92
HLA-DPA3-207ENST00000454398 TRBV7-6A0A0J9YX20 115 aa3.02□□□□□ -1.93
HLA-DPA3-207ENST00000454398 HIST1H4AP62805 103 aaKnown RBP3.02□□□□□ -1.93
HLA-DPA3-207ENST00000454398 DSCR8Q96T75 97 aa3.02□□□□□ -1.93
HLA-DPA3-207ENST00000454398 FAM236DA0A1B0GTK5 79 aa3.01□□□□□ -1.93
HLA-DPA3-207ENST00000454398 KRTAP16-1A8MUX0 517 aa3.01□□□□□ -1.93
HLA-DPA3-207ENST00000454398 GHRHP01286 108 aa3.01□□□□□ -1.93
HLA-DPA3-207ENST00000454398 FAM236CP0DP71 79 aa3.01□□□□□ -1.93
HLA-DPA3-207ENST00000454398 DSCR10P59022 87 aa3.01□□□□□ -1.93
HLA-DPA3-207ENST00000454398 SERP2Q8N6R1 65 aa3.01□□□□□ -1.93
HLA-DPA3-207ENST00000454398 KRTAP10-10P60014 251 aa3□□□□□ -1.93
HLA-DPA3-207ENST00000454398 LINC00575Q6W349 94 aa3□□□□□ -1.93
HLA-DPA3-207ENST00000454398 CYSTM1Q9H1C7 97 aa3□□□□□ -1.93
HLA-DPA3-207ENST00000454398 LINC00846Q9NV44 126 aa3□□□□□ -1.93
HLA-DPA3-207ENST00000454398 ORMDL1Q9P0S3 153 aa3□□□□□ -1.93
HLA-DPA3-207ENST00000454398 H0YGX0 51 aa2.99□□□□□ -1.93
HLA-DPA3-207ENST00000454398 RPS28P62857 69 aaKnown RBP2.99□□□□□ -1.93
HLA-DPA3-207ENST00000454398 C20orf166-AS1Q96NR2 134 aa2.99□□□□□ -1.93
HLA-DPA3-207ENST00000454398 A8MUU9 505 aa2.98□□□□□ -1.93
HLA-DPA3-207ENST00000454398 C4orf26Q17RF5 130 aa2.98□□□□□ -1.93
HLA-DPA3-207ENST00000454398 ATP5EP2Q5VTU8 51 aa2.98□□□□□ -1.93
HLA-DPA3-207ENST00000454398 A0A087WSZ3 146 aa2.97□□□□□ -1.93
HLA-DPA3-207ENST00000454398 CCKP06307 115 aa2.97□□□□□ -1.93
HLA-DPA3-207ENST00000454398 C20orf197Q8N268 126 aa2.97□□□□□ -1.93
HLA-DPA3-207ENST00000454398 JMJD7-PLA2G4BH0Y9G9 81 aa2.96□□□□□ -1.94
HLA-DPA3-207ENST00000454398 HRES1P13985 223 aa2.96□□□□□ -1.94
HLA-DPA3-207ENST00000454398 UBL5Q9BZL1 73 aa2.96□□□□□ -1.94
HLA-DPA3-207ENST00000454398 NOTCH2NLQ7Z3S9 236 aa2.95□□□□□ -1.94
HLA-DPA3-207ENST00000454398 SERP1Q9Y6X1 66 aa2.95□□□□□ -1.94
HLA-DPA3-207ENST00000454398 NEBP20929 6669 aa2.95□□□□□ -1.94
HLA-DPA3-207ENST00000454398 TRAV7A0A075B6U4 112 aa2.94□□□□□ -1.94
HLA-DPA3-207ENST00000454398 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
HLA-DPA3-207ENST00000454398 KRTAP19-6Q3LI70 58 aa2.94□□□□□ -1.94
HLA-DPA3-207ENST00000454398 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.94□□□□□ -1.94
HLA-DPA3-207ENST00000454398 MPLKIPQ8TAP9 179 aa2.94□□□□□ -1.94
HLA-DPA3-207ENST00000454398 TMEM256-PLSCR3K7ERE1 68 aa2.93□□□□□ -1.94
HLA-DPA3-207ENST00000454398 DEFB116Q30KQ4 102 aa2.93□□□□□ -1.94
HLA-DPA3-207ENST00000454398 SNURFQ9Y675 71 aa2.93□□□□□ -1.94
HLA-DPA3-207ENST00000454398 RBM3P98179 157 aaKnown RBP2.92□□□□□ -1.94
HLA-DPA3-207ENST00000454398 Q8N9P0 234 aaPredicted RBP2.92□□□□□ -1.94
HLA-DPA3-207ENST00000454398 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
HLA-DPA3-207ENST00000454398 SMIM26A0A096LP01 95 aa2.91□□□□□ -1.94
HLA-DPA3-207ENST00000454398 A0A1W2PNM2 257 aa2.91□□□□□ -1.94
HLA-DPA3-207ENST00000454398 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
HLA-DPA3-207ENST00000454398 Q6ZQT0 140 aa2.91□□□□□ -1.94
HLA-DPA3-207ENST00000454398 Q6ZVQ6 151 aa2.91□□□□□ -1.94
HLA-DPA3-207ENST00000454398 RBM12B-AS1Q9P1G2 102 aa2.91□□□□□ -1.94
HLA-DPA3-207ENST00000454398 V9GYY9 64 aa2.91□□□□□ -1.94
HLA-DPA3-207ENST00000454398 IGHV6-1A0A0B4J1U7 121 aa2.9□□□□□ -1.95
HLA-DPA3-207ENST00000454398 H7BZZ5 65 aa2.9□□□□□ -1.95
HLA-DPA3-207ENST00000454398 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
HLA-DPA3-207ENST00000454398 ATP5EP56381 51 aaPredicted RBP2.9□□□□□ -1.95
HLA-DPA3-207ENST00000454398 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
HLA-DPA3-207ENST00000454398 LOC110117498A0A087WWA1 95 aa2.89□□□□□ -1.95
HLA-DPA3-207ENST00000454398 LINC00313P59037 77 aa2.89□□□□□ -1.95
HLA-DPA3-207ENST00000454398 NREPQ16612 68 aa2.89□□□□□ -1.95
HLA-DPA3-207ENST00000454398 NDUFC1O43677 76 aa2.88□□□□□ -1.95
HLA-DPA3-207ENST00000454398 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
HLA-DPA3-207ENST00000454398 H3BQ85 93 aa2.87□□□□□ -1.95
HLA-DPA3-207ENST00000454398 PDE6GP18545 87 aa2.87□□□□□ -1.95
HLA-DPA3-207ENST00000454398 CXCL6P80162 114 aa2.87□□□□□ -1.95
HLA-DPA3-207ENST00000454398 KLKP1Q107X0 134 aa2.87□□□□□ -1.95
HLA-DPA3-207ENST00000454398 WFDC13Q8IUB5 93 aa2.87□□□□□ -1.95
HLA-DPA3-207ENST00000454398 TRBV7-4A0A0J9YYF1 115 aa2.85□□□□□ -1.95
HLA-DPA3-207ENST00000454398 BPY2O14599 106 aa2.85□□□□□ -1.95
HLA-DPA3-207ENST00000454398 SPINK7P58062 85 aa2.85□□□□□ -1.95
HLA-DPA3-207ENST00000454398 Q8N9L7 120 aa2.85□□□□□ -1.95
HLA-DPA3-207ENST00000454398 TMEM254Q8TBM7 123 aa2.85□□□□□ -1.95
HLA-DPA3-207ENST00000454398 ZCCHC13Q8WW36 166 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms