RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 H0Y9P7 68 aa12.02□□□□□ -0.49
PDCD2-204ENST00000453163 MMP24-AS1A0A0U1RRL7 71 aa12.01□□□□□ -0.49
PDCD2-204ENST00000453163 V9GYY9 64 aa12.01□□□□□ -0.49
PDCD2-204ENST00000453163 Q6ZSA8 131 aa12□□□□□ -0.49
PDCD2-204ENST00000453163 A8MUN3 132 aa11.96□□□□□ -0.5
PDCD2-204ENST00000453163 SACSQ9NZJ4 4579 aa11.94□□□□□ -0.5
PDCD2-204ENST00000453163 Q5VV11 94 aa11.92□□□□□ -0.5
PDCD2-204ENST00000453163 VPS13BQ7Z7G8 4022 aa11.91□□□□□ -0.5
PDCD2-204ENST00000453163 IGHV6-1A0A0B4J1U7 121 aa11.9□□□□□ -0.5
PDCD2-204ENST00000453163 PKHD1P08F94 4074 aa11.89□□□□□ -0.51
PDCD2-204ENST00000453163 Q8N9P0 234 aaPredicted RBP11.89□□□□□ -0.51
PDCD2-204ENST00000453163 C8orf17Q9NRJ1 99 aa11.89□□□□□ -0.51
PDCD2-204ENST00000453163 A0A1B0GVX0 72 aa11.89□□□□□ -0.51
PDCD2-204ENST00000453163 ASB16-AS1Q495Z4 193 aa11.87□□□□□ -0.51
PDCD2-204ENST00000453163 A0A087X002 238 aa11.86□□□□□ -0.51
PDCD2-204ENST00000453163 CDK2AP2O75956 126 aa11.86□□□□□ -0.51
PDCD2-204ENST00000453163 SPINK6Q6UWN8 80 aa11.85□□□□□ -0.51
PDCD2-204ENST00000453163 LIMD2Q9BT23 127 aa11.85□□□□□ -0.51
PDCD2-204ENST00000453163 SSBP3-AS1Q7Z2R9 100 aa11.84□□□□□ -0.51
PDCD2-204ENST00000453163 PMAIP1Q13794 54 aa11.84□□□□□ -0.51
PDCD2-204ENST00000453163 NOTCH2NLQ7Z3S9 236 aa11.83□□□□□ -0.52
PDCD2-204ENST00000453163 CD164Q04900 197 aa11.83□□□□□ -0.52
PDCD2-204ENST00000453163 KRTAP13-2Q52LG2 175 aa11.82□□□□□ -0.52
PDCD2-204ENST00000453163 IGLV7-46A0A075B6I9 117 aa11.81□□□□□ -0.52
PDCD2-204ENST00000453163 A8MU10 97 aa11.8□□□□□ -0.52
PDCD2-204ENST00000453163 COA5Q86WW8 74 aa11.78□□□□□ -0.52
PDCD2-204ENST00000453163 SEC61GP60059 68 aa11.77□□□□□ -0.52
PDCD2-204ENST00000453163 CHKB-CPT1BH3BT56 60 aa11.77□□□□□ -0.53
PDCD2-204ENST00000453163 PRR15LQ9BU68 103 aa11.77□□□□□ -0.53
PDCD2-204ENST00000453163 NDUFS5O43920 106 aa11.76□□□□□ -0.53
PDCD2-204ENST00000453163 KRTAP1-4P0C5Y4 121 aa11.75□□□□□ -0.53
PDCD2-204ENST00000453163 MRPL34Q9BQ48 92 aaKnown RBP11.75□□□□□ -0.53
PDCD2-204ENST00000453163 TP53AIP1Q9HCN2 124 aa11.75□□□□□ -0.53
PDCD2-204ENST00000453163 LOC101927531A0A1B0GV80 90 aa11.73□□□□□ -0.53
PDCD2-204ENST00000453163 Q75L30 129 aa11.72□□□□□ -0.53
PDCD2-204ENST00000453163 PCOTHQ58A44 107 aa11.7□□□□□ -0.54
PDCD2-204ENST00000453163 DYNC1H1Q14204 4646 aaKnown RBP11.7□□□□□ -0.54
PDCD2-204ENST00000453163 LCA10Q71F78 164 aa11.64□□□□□ -0.55
PDCD2-204ENST00000453163 PLA2G1BP04054 148 aaKnown RBP11.63□□□□□ -0.55
PDCD2-204ENST00000453163 LINC01558Q9Y6Z2 57 aa11.61□□□□□ -0.55
PDCD2-204ENST00000453163 A6NED7 52 aa11.6□□□□□ -0.55
PDCD2-204ENST00000453163 C8orf87E5RJ46 101 aa11.59□□□□□ -0.55
PDCD2-204ENST00000453163 ATP11AUNQ6ZP68 121 aa11.58□□□□□ -0.56
PDCD2-204ENST00000453163 RYR2Q92736 4967 aa11.58□□□□□ -0.56
PDCD2-204ENST00000453163 APOBP04114 4563 aaKnown RBP11.57□□□□□ -0.56
PDCD2-204ENST00000453163 TYMSOSQ8TAI1 123 aa11.57□□□□□ -0.56
PDCD2-204ENST00000453163 A0A1B0GVY2 172 aa11.56□□□□□ -0.56
PDCD2-204ENST00000453163 SMR3BP02814 79 aaPredicted RBP11.56□□□□□ -0.56
PDCD2-204ENST00000453163 Q5W150 140 aa11.56□□□□□ -0.56
PDCD2-204ENST00000453163 LINC00313P59037 77 aa11.55□□□□□ -0.56
PDCD2-204ENST00000453163 FAT1Q14517 4588 aa11.55□□□□□ -0.56
PDCD2-204ENST00000453163 HRES1P13985 223 aa11.55□□□□□ -0.56
PDCD2-204ENST00000453163 SPAG11AQ6PDA7 123 aa11.55□□□□□ -0.56
PDCD2-204ENST00000453163 CDC42SE1Q9NRR8 79 aa11.54□□□□□ -0.56
PDCD2-204ENST00000453163 SPTSSBQ8NFR3 76 aa11.54□□□□□ -0.56
PDCD2-204ENST00000453163 KMT2CQ8NEZ4 4911 aaKnown RBP11.53□□□□□ -0.56
PDCD2-204ENST00000453163 KRTAP13-3Q3SY46 172 aa11.53□□□□□ -0.56
PDCD2-204ENST00000453163 C4orf48Q5BLP8 95 aa11.51□□□□□ -0.57
PDCD2-204ENST00000453163 KTN1-AS1Q86SY8 53 aa11.51□□□□□ -0.57
PDCD2-204ENST00000453163 PRR26Q8N8Z3 221 aa11.5□□□□□ -0.57
PDCD2-204ENST00000453163 A6NN06 94 aa11.48□□□□□ -0.57
PDCD2-204ENST00000453163 SPINK1P00995 79 aa11.46□□□□□ -0.57
PDCD2-204ENST00000453163 KRTAP16-1A8MUX0 517 aa11.44□□□□□ -0.58
PDCD2-204ENST00000453163 RETNLBQ9BQ08 111 aa11.42□□□□□ -0.58
PDCD2-204ENST00000453163 LINC00304Q8N9R0 145 aa11.42□□□□□ -0.58
PDCD2-204ENST00000453163 SPINK7P58062 85 aa11.41□□□□□ -0.58
PDCD2-204ENST00000453163 KRTAP10-4P60372 401 aaPredicted RBP11.4□□□□□ -0.58
PDCD2-204ENST00000453163 FAM229AH3BQW9 127 aa11.38□□□□□ -0.59
PDCD2-204ENST00000453163 PKHD1L1Q86WI1 4243 aa11.37□□□□□ -0.59
PDCD2-204ENST00000453163 RPS29P62273 56 aaKnown RBP11.32□□□□□ -0.6
PDCD2-204ENST00000453163 RBM12B-AS1Q9P1G2 102 aa11.32□□□□□ -0.6
PDCD2-204ENST00000453163 ACYP2P14621 99 aa11.29□□□□□ -0.6
PDCD2-204ENST00000453163 C7orf65Q6ZTY9 151 aa11.28□□□□□ -0.6
PDCD2-204ENST00000453163 IGKV2-30P06310 120 aa11.27□□□□□ -0.6
PDCD2-204ENST00000453163 DMAC1Q96GE9 116 aa11.24□□□□□ -0.61
PDCD2-204ENST00000453163 RYR3Q15413 4870 aa11.19□□□□□ -0.62
PDCD2-204ENST00000453163 IGKV2D-30A0A075B6S6 120 aa11.19□□□□□ -0.62
PDCD2-204ENST00000453163 HSPG2P98160 4391 aa11.15□□□□□ -0.62
PDCD2-204ENST00000453163 C9orf92A6NGG3 77 aa11.13□□□□□ -0.63
PDCD2-204ENST00000453163 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
PDCD2-204ENST00000453163 FLG2Q5D862 2391 aaPredicted RBP11.08□□□□□ -0.64
PDCD2-204ENST00000453163 TNXBP22105 4242 aa11.07□□□□□ -0.64
PDCD2-204ENST00000453163 A0A1B0GU69 56 aa11.07□□□□□ -0.64
PDCD2-204ENST00000453163 Q5VSD8 79 aa11.03□□□□□ -0.64
PDCD2-204ENST00000453163 SPATA8Q6RVD6 105 aa11.03□□□□□ -0.64
PDCD2-204ENST00000453163 RYR1P21817 5038 aa11.02□□□□□ -0.65
PDCD2-204ENST00000453163 C20orf166-AS1Q96NR2 134 aa11.02□□□□□ -0.65
PDCD2-204ENST00000453163 A8MUU9 505 aa11.01□□□□□ -0.65
PDCD2-204ENST00000453163 FAT3Q8TDW7 4589 aa11□□□□□ -0.65
PDCD2-204ENST00000453163 Q8N1X5 172 aa11□□□□□ -0.65
PDCD2-204ENST00000453163 PRAC1Q96KF2 57 aa10.93□□□□□ -0.66
PDCD2-204ENST00000453163 KRTAP10-8P60410 259 aa10.93□□□□□ -0.66
PDCD2-204ENST00000453163 UQCR11O14957 56 aa10.92□□□□□ -0.66
PDCD2-204ENST00000453163 MIR22HGQ0VDD5 57 aa10.92□□□□□ -0.66
PDCD2-204ENST00000453163 KRTAP17-1Q9BYP8 105 aa10.92□□□□□ -0.66
PDCD2-204ENST00000453163 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
PDCD2-204ENST00000453163 ADM2Q7Z4H4 148 aa10.9□□□□□ -0.67
PDCD2-204ENST00000453163 DMBT1Q9UGM3 2413 aaPredicted RBP10.84□□□□□ -0.67
PDCD2-204ENST00000453163 MYCBP2O75592 4640 aa10.83□□□□□ -0.68
PDCD2-204ENST00000453163 EPPK1P58107 5090 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms