RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 IGLV9-49A0A0B4J1Y8 123 aa6.42□□□□□ -1.38
PKP4-206ENST00000452162 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
PKP4-206ENST00000452162 RPL37AP61513 92 aaKnown RBP6.42□□□□□ -1.38
PKP4-206ENST00000452162 LINC00472Q9H8W2 130 aa6.42□□□□□ -1.38
PKP4-206ENST00000452162 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
PKP4-206ENST00000452162 PLA2G1BP04054 148 aaKnown RBP6.41□□□□□ -1.38
PKP4-206ENST00000452162 IGLV7-43P04211 117 aa6.4□□□□□ -1.38
PKP4-206ENST00000452162 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.38
PKP4-206ENST00000452162 KRTAP3-2Q9BYR7 98 aa6.4□□□□□ -1.38
PKP4-206ENST00000452162 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
PKP4-206ENST00000452162 HCG22E2RYF7 251 aa6.39□□□□□ -1.39
PKP4-206ENST00000452162 SNURFQ9Y675 71 aa6.39□□□□□ -1.39
PKP4-206ENST00000452162 H7BZZ5 65 aa6.39□□□□□ -1.39
PKP4-206ENST00000452162 TMEM254Q8TBM7 123 aa6.38□□□□□ -1.39
PKP4-206ENST00000452162 ANAPC11Q9NYG5 84 aa6.38□□□□□ -1.39
PKP4-206ENST00000452162 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
PKP4-206ENST00000452162 MOBPQ13875 183 aa6.37□□□□□ -1.39
PKP4-206ENST00000452162 A8MWP4 228 aa6.37□□□□□ -1.39
PKP4-206ENST00000452162 PRR15Q8IV56 129 aa6.36□□□□□ -1.39
PKP4-206ENST00000452162 Q96NJ1 140 aa6.36□□□□□ -1.39
PKP4-206ENST00000452162 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
PKP4-206ENST00000452162 KRTAP29-1A8MX34 341 aaPredicted RBP6.35□□□□□ -1.39
PKP4-206ENST00000452162 NDUFC1O43677 76 aa6.34□□□□□ -1.39
PKP4-206ENST00000452162 WFDC13Q8IUB5 93 aa6.33□□□□□ -1.4
PKP4-206ENST00000452162 FAT3Q8TDW7 4589 aa6.33□□□□□ -1.4
PKP4-206ENST00000452162 H3BS24 57 aa6.32□□□□□ -1.4
PKP4-206ENST00000452162 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
PKP4-206ENST00000452162 MMP24-AS1A0A0U1RRL7 71 aa6.29□□□□□ -1.4
PKP4-206ENST00000452162 ZCCHC13Q8WW36 166 aaKnown RBP6.29□□□□□ -1.4
PKP4-206ENST00000452162 NDUFB1O75438 58 aa6.28□□□□□ -1.4
PKP4-206ENST00000452162 DMBT1Q9UGM3 2413 aaPredicted RBP6.28□□□□□ -1.4
PKP4-206ENST00000452162 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
PKP4-206ENST00000452162 SSBP3-AS1Q7Z2R9 100 aa6.26□□□□□ -1.41
PKP4-206ENST00000452162 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
PKP4-206ENST00000452162 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
PKP4-206ENST00000452162 SPINK6Q6UWN8 80 aa6.25□□□□□ -1.41
PKP4-206ENST00000452162 A0A087X002 238 aa6.24□□□□□ -1.41
PKP4-206ENST00000452162 A0A1B0GVX0 72 aa6.24□□□□□ -1.41
PKP4-206ENST00000452162 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
PKP4-206ENST00000452162 FAM229BQ4G0N7 80 aa6.24□□□□□ -1.41
PKP4-206ENST00000452162 C8orf17Q9NRJ1 99 aa6.24□□□□□ -1.41
PKP4-206ENST00000452162 KRTAP13-2Q52LG2 175 aa6.23□□□□□ -1.41
PKP4-206ENST00000452162 HERC1Q15751 4861 aa6.23□□□□□ -1.41
PKP4-206ENST00000452162 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
PKP4-206ENST00000452162 MPLKIPQ8TAP9 179 aa6.22□□□□□ -1.41
PKP4-206ENST00000452162 TNXBP22105 4242 aa6.22□□□□□ -1.41
PKP4-206ENST00000452162 IGHV6-1A0A0B4J1U7 121 aa6.21□□□□□ -1.42
PKP4-206ENST00000452162 MP68P56378 58 aa6.21□□□□□ -1.42
PKP4-206ENST00000452162 H0Y9P7 68 aa6.2□□□□□ -1.42
PKP4-206ENST00000452162 J3QL48 77 aa6.2□□□□□ -1.42
PKP4-206ENST00000452162 H3BPC8 53 aa6.19□□□□□ -1.42
PKP4-206ENST00000452162 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
PKP4-206ENST00000452162 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
PKP4-206ENST00000452162 MT1HL1P0DM35 61 aa6.18□□□□□ -1.42
PKP4-206ENST00000452162 TRAV22A0A0B4J277 110 aa6.17□□□□□ -1.42
PKP4-206ENST00000452162 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
PKP4-206ENST00000452162 PRR26Q8N8Z3 221 aa6.16□□□□□ -1.42
PKP4-206ENST00000452162 TP53AIP1Q9HCN2 124 aa6.16□□□□□ -1.42
PKP4-206ENST00000452162 C8orf87E5RJ46 101 aa6.16□□□□□ -1.42
PKP4-206ENST00000452162 MRPL34Q9BQ48 92 aaKnown RBP6.16□□□□□ -1.42
PKP4-206ENST00000452162 C1orf64Q8NEQ6 169 aa6.14□□□□□ -1.43
PKP4-206ENST00000452162 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
PKP4-206ENST00000452162 NDUFS5O43920 106 aa6.11□□□□□ -1.43
PKP4-206ENST00000452162 CYP4F30PQ9H0H9 118 aa6.11□□□□□ -1.43
PKP4-206ENST00000452162 TYMSOSQ8TAI1 123 aa6.1□□□□□ -1.43
PKP4-206ENST00000452162 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
PKP4-206ENST00000452162 SPANXA2-OT1Q8N9U9 137 aa6.09□□□□□ -1.43
PKP4-206ENST00000452162 PRR4Q16378 134 aa6.08□□□□□ -1.44
PKP4-206ENST00000452162 KRTAP13-3Q3SY46 172 aa6.07□□□□□ -1.44
PKP4-206ENST00000452162 LINC00313P59037 77 aa6.06□□□□□ -1.44
PKP4-206ENST00000452162 SPINK1P00995 79 aa6.06□□□□□ -1.44
PKP4-206ENST00000452162 Q5W150 140 aa6.04□□□□□ -1.44
PKP4-206ENST00000452162 Q1T7F1 81 aa6.04□□□□□ -1.44
PKP4-206ENST00000452162 KRTAP16-1A8MUX0 517 aa6.03□□□□□ -1.44
PKP4-206ENST00000452162 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
PKP4-206ENST00000452162 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
PKP4-206ENST00000452162 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
PKP4-206ENST00000452162 PCOTHQ58A44 107 aa6.02□□□□□ -1.45
PKP4-206ENST00000452162 LINC00304Q8N9R0 145 aa6.02□□□□□ -1.45
PKP4-206ENST00000452162 HMCN2Q8NDA2 5059 aa6.02□□□□□ -1.45
PKP4-206ENST00000452162 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
PKP4-206ENST00000452162 SPAG11AQ6PDA7 123 aa6.01□□□□□ -1.45
PKP4-206ENST00000452162 A8MU10 97 aa6□□□□□ -1.45
PKP4-206ENST00000452162 A8MUN3 132 aa5.99□□□□□ -1.45
PKP4-206ENST00000452162 PSPHP1O15172 72 aa5.98□□□□□ -1.45
PKP4-206ENST00000452162 LCA10Q71F78 164 aa5.96□□□□□ -1.45
PKP4-206ENST00000452162 A6NN06 94 aa5.95□□□□□ -1.46
PKP4-206ENST00000452162 C7orf65Q6ZTY9 151 aa5.93□□□□□ -1.46
PKP4-206ENST00000452162 COA5Q86WW8 74 aa5.93□□□□□ -1.46
PKP4-206ENST00000452162 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
PKP4-206ENST00000452162 LRP2P98164 4655 aa5.93□□□□□ -1.46
PKP4-206ENST00000452162 IGKV2-30P06310 120 aa5.92□□□□□ -1.46
PKP4-206ENST00000452162 ATP11AUNQ6ZP68 121 aa5.92□□□□□ -1.46
PKP4-206ENST00000452162 LPAP08519 4548 aa5.91□□□□□ -1.46
PKP4-206ENST00000452162 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
PKP4-206ENST00000452162 HRES1P13985 223 aa5.88□□□□□ -1.47
PKP4-206ENST00000452162 Q5VV11 94 aa5.88□□□□□ -1.47
PKP4-206ENST00000452162 UBR4Q5T4S7 5183 aa5.84□□□□□ -1.47
PKP4-206ENST00000452162 DMAC1Q96GE9 116 aa5.84□□□□□ -1.47
PKP4-206ENST00000452162 IGKV2D-30A0A075B6S6 120 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms