RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SS18L2Q9UHA2 77 aa6.54□□□□□ -1.36
CPSF4-208ENST00000452047 DNAL4O96015 105 aa6.53□□□□□ -1.36
CPSF4-208ENST00000452047 GHRHP01286 108 aa6.53□□□□□ -1.36
CPSF4-208ENST00000452047 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
CPSF4-208ENST00000452047 A0A087WSZ3 146 aa6.51□□□□□ -1.37
CPSF4-208ENST00000452047 COX6B2Q6YFQ2 88 aa6.51□□□□□ -1.37
CPSF4-208ENST00000452047 LINC00643Q86TS7 51 aa6.51□□□□□ -1.37
CPSF4-208ENST00000452047 Q96NJ1 140 aa6.51□□□□□ -1.37
CPSF4-208ENST00000452047 ATP11AUNQ6ZP68 121 aa6.5□□□□□ -1.37
CPSF4-208ENST00000452047 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
CPSF4-208ENST00000452047 C20orf166-AS1Q96NR2 134 aa6.49□□□□□ -1.37
CPSF4-208ENST00000452047 A0A1W2PNM2 257 aa6.48□□□□□ -1.37
CPSF4-208ENST00000452047 H3BQ85 93 aa6.47□□□□□ -1.37
CPSF4-208ENST00000452047 M0R2T5 61 aa6.47□□□□□ -1.37
CPSF4-208ENST00000452047 ORMDL1Q9P0S3 153 aa6.47□□□□□ -1.37
CPSF4-208ENST00000452047 A8MUU9 505 aa6.46□□□□□ -1.38
CPSF4-208ENST00000452047 JMJD7-PLA2G4BH0Y9G9 81 aa6.45□□□□□ -1.38
CPSF4-208ENST00000452047 TMEM256-PLSCR3K7ERE1 68 aa6.44□□□□□ -1.38
CPSF4-208ENST00000452047 TRBV7-4A0A0J9YYF1 115 aa6.42□□□□□ -1.38
CPSF4-208ENST00000452047 DSCR10P59022 87 aa6.42□□□□□ -1.38
CPSF4-208ENST00000452047 CCKP06307 115 aa6.4□□□□□ -1.38
CPSF4-208ENST00000452047 ATP5EP2Q5VTU8 51 aa6.4□□□□□ -1.38
CPSF4-208ENST00000452047 KRTAP16-1A8MUX0 517 aa6.39□□□□□ -1.39
CPSF4-208ENST00000452047 C14orf132Q9NPU4 83 aa6.39□□□□□ -1.39
CPSF4-208ENST00000452047 IGKV4-1P06312 121 aa6.38□□□□□ -1.39
CPSF4-208ENST00000452047 PDE6GP18545 87 aa6.38□□□□□ -1.39
CPSF4-208ENST00000452047 LINC00313P59037 77 aa6.37□□□□□ -1.39
CPSF4-208ENST00000452047 LINC00472Q9H8W2 130 aa6.37□□□□□ -1.39
CPSF4-208ENST00000452047 FAM236AA0A1B0GUQ0 79 aa6.36□□□□□ -1.39
CPSF4-208ENST00000452047 FAM236BA0A1B0GV22 79 aa6.36□□□□□ -1.39
CPSF4-208ENST00000452047 HIST1H4AP62805 103 aaKnown RBP6.36□□□□□ -1.39
CPSF4-208ENST00000452047 NOTCH2NLQ7Z3S9 236 aa6.36□□□□□ -1.39
CPSF4-208ENST00000452047 LOC110117498A0A087WWA1 95 aa6.35□□□□□ -1.39
CPSF4-208ENST00000452047 ATOX1O00244 68 aa6.34□□□□□ -1.39
CPSF4-208ENST00000452047 DEFB116Q30KQ4 102 aa6.34□□□□□ -1.39
CPSF4-208ENST00000452047 LINC00846Q9NV44 126 aa6.34□□□□□ -1.39
CPSF4-208ENST00000452047 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
CPSF4-208ENST00000452047 UQCRQO14949 82 aa6.32□□□□□ -1.4
CPSF4-208ENST00000452047 RBM3P98179 157 aaKnown RBP6.32□□□□□ -1.4
CPSF4-208ENST00000452047 UBL5Q9BZL1 73 aa6.31□□□□□ -1.4
CPSF4-208ENST00000452047 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
CPSF4-208ENST00000452047 Q6ZQT0 140 aa6.3□□□□□ -1.4
CPSF4-208ENST00000452047 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
CPSF4-208ENST00000452047 COX7CP15954 63 aa6.29□□□□□ -1.4
CPSF4-208ENST00000452047 MPLKIPQ8TAP9 179 aa6.28□□□□□ -1.4
CPSF4-208ENST00000452047 DSCR8Q96T75 97 aa6.28□□□□□ -1.4
CPSF4-208ENST00000452047 A0A1B0GVX0 72 aa6.27□□□□□ -1.41
CPSF4-208ENST00000452047 HRES1P13985 223 aa6.27□□□□□ -1.41
CPSF4-208ENST00000452047 IGKV3D-7A0A0C4DH55 119 aa6.26□□□□□ -1.41
CPSF4-208ENST00000452047 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
CPSF4-208ENST00000452047 SERP2Q8N6R1 65 aa6.25□□□□□ -1.41
CPSF4-208ENST00000452047 CXCL6P80162 114 aa6.24□□□□□ -1.41
CPSF4-208ENST00000452047 FAM236DA0A1B0GTK5 79 aa6.23□□□□□ -1.41
CPSF4-208ENST00000452047 A0A1B0GW54 56 aa6.23□□□□□ -1.41
CPSF4-208ENST00000452047 J3KT08 172 aa6.23□□□□□ -1.41
CPSF4-208ENST00000452047 FAM236CP0DP71 79 aa6.23□□□□□ -1.41
CPSF4-208ENST00000452047 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
CPSF4-208ENST00000452047 RBM12B-AS1Q9P1G2 102 aa6.22□□□□□ -1.41
CPSF4-208ENST00000452047 KRTAP9-7A8MTY7 169 aa6.2□□□□□ -1.42
CPSF4-208ENST00000452047 Q6ZVQ6 151 aa6.2□□□□□ -1.42
CPSF4-208ENST00000452047 MT2AP02795 61 aa6.19□□□□□ -1.42
CPSF4-208ENST00000452047 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
CPSF4-208ENST00000452047 A0A087WVE0 104 aa6.18□□□□□ -1.42
CPSF4-208ENST00000452047 Q8N9P0 234 aaPredicted RBP6.18□□□□□ -1.42
CPSF4-208ENST00000452047 A8MWP4 228 aa6.16□□□□□ -1.42
CPSF4-208ENST00000452047 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
CPSF4-208ENST00000452047 NDUFB1O75438 58 aa6.16□□□□□ -1.42
CPSF4-208ENST00000452047 TMEM258P61165 79 aa6.16□□□□□ -1.42
CPSF4-208ENST00000452047 USH2AO75445 5202 aa6.16□□□□□ -1.42
CPSF4-208ENST00000452047 MT1FP04733 61 aa6.15□□□□□ -1.42
CPSF4-208ENST00000452047 SPINK7P58062 85 aa6.15□□□□□ -1.42
CPSF4-208ENST00000452047 C8orf17Q9NRJ1 99 aa6.15□□□□□ -1.42
CPSF4-208ENST00000452047 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
CPSF4-208ENST00000452047 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
CPSF4-208ENST00000452047 SSPOA2VEC9 5147 aa6.12□□□□□ -1.43
CPSF4-208ENST00000452047 NREPQ16612 68 aa6.1□□□□□ -1.43
CPSF4-208ENST00000452047 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
CPSF4-208ENST00000452047 PRR15Q8IV56 129 aa6.09□□□□□ -1.43
CPSF4-208ENST00000452047 LCE2BO14633 110 aa6.08□□□□□ -1.44
CPSF4-208ENST00000452047 MMP24-AS1A0A0U1RRL7 71 aa6.07□□□□□ -1.44
CPSF4-208ENST00000452047 NDUFC1O43677 76 aa6.07□□□□□ -1.44
CPSF4-208ENST00000452047 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
CPSF4-208ENST00000452047 KLKP1Q107X0 134 aa6.07□□□□□ -1.44
CPSF4-208ENST00000452047 WFDC13Q8IUB5 93 aa6.07□□□□□ -1.44
CPSF4-208ENST00000452047 BPY2O14599 106 aa6.06□□□□□ -1.44
CPSF4-208ENST00000452047 C20orf197Q8N268 126 aa6.04□□□□□ -1.44
CPSF4-208ENST00000452047 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
CPSF4-208ENST00000452047 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
CPSF4-208ENST00000452047 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
CPSF4-208ENST00000452047 CYSTM1Q9H1C7 97 aa6.03□□□□□ -1.44
CPSF4-208ENST00000452047 K7EQZ3 153 aa6.02□□□□□ -1.45
CPSF4-208ENST00000452047 ATP5EP56381 51 aaPredicted RBP6.02□□□□□ -1.45
CPSF4-208ENST00000452047 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
CPSF4-208ENST00000452047 hDV103S1A0JD37 113 aa6□□□□□ -1.45
CPSF4-208ENST00000452047 H7BZZ5 65 aa6□□□□□ -1.45
CPSF4-208ENST00000452047 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
CPSF4-208ENST00000452047 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
CPSF4-208ENST00000452047 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
CPSF4-208ENST00000452047 NDUFS5O43920 106 aa5.95□□□□□ -1.46
CPSF4-208ENST00000452047 Q5W150 140 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms