RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 A0A1W2PNM2 257 aa4.52□□□□□ -1.69
RFX3-209ENST00000451859 DSCR10P59022 87 aa4.52□□□□□ -1.69
RFX3-209ENST00000451859 ORMDL1Q9P0S3 153 aa4.52□□□□□ -1.69
RFX3-209ENST00000451859 ANKRD29Q8N6D5 301 aa4.51□□□□□ -1.69
RFX3-209ENST00000451859 COX6CP09669 75 aa4.5□□□□□ -1.69
RFX3-209ENST00000451859 DEFB116Q30KQ4 102 aa4.5□□□□□ -1.69
RFX3-209ENST00000451859 A8MUU9 505 aa4.49□□□□□ -1.69
RFX3-209ENST00000451859 IGKV4-1P06312 121 aa4.49□□□□□ -1.69
RFX3-209ENST00000451859 C20orf166-AS1Q96NR2 134 aa4.49□□□□□ -1.69
RFX3-209ENST00000451859 CCKP06307 115 aa4.48□□□□□ -1.69
RFX3-209ENST00000451859 VPS25Q9BRG1 176 aa4.48□□□□□ -1.69
RFX3-209ENST00000451859 UQCR10Q9UDW1 63 aa4.48□□□□□ -1.69
RFX3-209ENST00000451859 CRCT1Q9UGL9 99 aa4.48□□□□□ -1.69
RFX3-209ENST00000451859 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
RFX3-209ENST00000451859 TRACP01848 142 aa4.47□□□□□ -1.69
RFX3-209ENST00000451859 SCGB1C2P0DMR2 95 aa4.47□□□□□ -1.69
RFX3-209ENST00000451859 TRBV7-4A0A0J9YYF1 115 aa4.46□□□□□ -1.7
RFX3-209ENST00000451859 TMEM256-PLSCR3K7ERE1 68 aa4.46□□□□□ -1.7
RFX3-209ENST00000451859 TRBV20-1A0A075B6N2 111 aa4.45□□□□□ -1.7
RFX3-209ENST00000451859 IGHV6-1A0A0B4J1U7 121 aa4.45□□□□□ -1.7
RFX3-209ENST00000451859 H3BQ85 93 aa4.45□□□□□ -1.7
RFX3-209ENST00000451859 LINC00313P59037 77 aa4.45□□□□□ -1.7
RFX3-209ENST00000451859 NOTCH2NLQ7Z3S9 236 aa4.44□□□□□ -1.7
RFX3-209ENST00000451859 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
RFX3-209ENST00000451859 UBE2V1Q13404 147 aa4.43□□□□□ -1.7
RFX3-209ENST00000451859 FAM236DA0A1B0GTK5 79 aa4.42□□□□□ -1.7
RFX3-209ENST00000451859 FAM236CP0DP71 79 aa4.42□□□□□ -1.7
RFX3-209ENST00000451859 RBM3P98179 157 aaKnown RBP4.42□□□□□ -1.7
RFX3-209ENST00000451859 DSCR8Q96T75 97 aa4.42□□□□□ -1.7
RFX3-209ENST00000451859 NAA38Q9BRA0 125 aaKnown RBP4.42□□□□□ -1.7
RFX3-209ENST00000451859 LINC00472Q9H8W2 130 aa4.42□□□□□ -1.7
RFX3-209ENST00000451859 BAALC-AS2P0C853 105 aa4.4□□□□□ -1.71
RFX3-209ENST00000451859 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
RFX3-209ENST00000451859 C9JAW5 83 aa4.38□□□□□ -1.71
RFX3-209ENST00000451859 C8orf87E5RJ46 101 aa4.37□□□□□ -1.71
RFX3-209ENST00000451859 M0R143 59 aa4.37□□□□□ -1.71
RFX3-209ENST00000451859 ATXN8Q156A1 80 aa4.36□□□□□ -1.71
RFX3-209ENST00000451859 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
RFX3-209ENST00000451859 J3KT08 172 aa4.35□□□□□ -1.71
RFX3-209ENST00000451859 HRES1P13985 223 aa4.35□□□□□ -1.71
RFX3-209ENST00000451859 Q6ZQT0 140 aa4.35□□□□□ -1.71
RFX3-209ENST00000451859 BATFQ16520 125 aa4.34□□□□□ -1.71
RFX3-209ENST00000451859 JMJD7-PLA2G4BH0Y9G9 81 aa4.33□□□□□ -1.72
RFX3-209ENST00000451859 NDUFB1O75438 58 aa4.33□□□□□ -1.72
RFX3-209ENST00000451859 ZCCHC13Q8WW36 166 aaKnown RBP4.33□□□□□ -1.72
RFX3-209ENST00000451859 C14orf132Q9NPU4 83 aa4.33□□□□□ -1.72
RFX3-209ENST00000451859 USH2AO75445 5202 aa4.32□□□□□ -1.72
RFX3-209ENST00000451859 C21orf62-AS1Q17RA5 79 aa4.32□□□□□ -1.72
RFX3-209ENST00000451859 LYRM7Q5U5X0 104 aa4.32□□□□□ -1.72
RFX3-209ENST00000451859 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
RFX3-209ENST00000451859 LOC110117498A0A087WWA1 95 aa4.31□□□□□ -1.72
RFX3-209ENST00000451859 SMIM6P0DI80 62 aa4.31□□□□□ -1.72
RFX3-209ENST00000451859 MPLKIPQ8TAP9 179 aa4.31□□□□□ -1.72
RFX3-209ENST00000451859 C8orf17Q9NRJ1 99 aa4.31□□□□□ -1.72
RFX3-209ENST00000451859 A8MWP4 228 aa4.3□□□□□ -1.72
RFX3-209ENST00000451859 SPINK7P58062 85 aa4.3□□□□□ -1.72
RFX3-209ENST00000451859 IGKV3D-7A0A0C4DH55 119 aa4.29□□□□□ -1.72
RFX3-209ENST00000451859 TSTD3H0UI37 97 aa4.29□□□□□ -1.72
RFX3-209ENST00000451859 MT2AP02795 61 aa4.29□□□□□ -1.72
RFX3-209ENST00000451859 MTURNQ8N3F0 131 aa4.29□□□□□ -1.72
RFX3-209ENST00000451859 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
RFX3-209ENST00000451859 PDE6GP18545 87 aa4.28□□□□□ -1.72
RFX3-209ENST00000451859 Q8N9P0 234 aaPredicted RBP4.28□□□□□ -1.72
RFX3-209ENST00000451859 NREPQ16612 68 aa4.27□□□□□ -1.73
RFX3-209ENST00000451859 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
RFX3-209ENST00000451859 Q6ZVQ6 151 aa4.27□□□□□ -1.73
RFX3-209ENST00000451859 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
RFX3-209ENST00000451859 A0A1B0GW54 56 aa4.26□□□□□ -1.73
RFX3-209ENST00000451859 MT1FP04733 61 aa4.26□□□□□ -1.73
RFX3-209ENST00000451859 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
RFX3-209ENST00000451859 PRR15Q8IV56 129 aa4.25□□□□□ -1.73
RFX3-209ENST00000451859 MMP24-AS1A0A0U1RRL7 71 aa4.24□□□□□ -1.73
RFX3-209ENST00000451859 NDUFS5O43920 106 aa4.24□□□□□ -1.73
RFX3-209ENST00000451859 K7EQZ3 153 aa4.23□□□□□ -1.73
RFX3-209ENST00000451859 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
RFX3-209ENST00000451859 A0A1W2PPM0 123 aa4.22□□□□□ -1.73
RFX3-209ENST00000451859 H3BT86 120 aa4.22□□□□□ -1.73
RFX3-209ENST00000451859 TAX1BP3O14907 124 aa4.22□□□□□ -1.73
RFX3-209ENST00000451859 TMEM254Q8TBM7 123 aa4.22□□□□□ -1.73
RFX3-209ENST00000451859 hDV103S1A0JD37 113 aa4.21□□□□□ -1.74
RFX3-209ENST00000451859 LOC105371267A0A1B0GV96 52 aa4.19□□□□□ -1.74
RFX3-209ENST00000451859 BPY2O14599 106 aa4.19□□□□□ -1.74
RFX3-209ENST00000451859 Q8N9L7 120 aa4.19□□□□□ -1.74
RFX3-209ENST00000451859 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
RFX3-209ENST00000451859 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
RFX3-209ENST00000451859 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
RFX3-209ENST00000451859 SPCS1Q9Y6A9 102 aa4.18□□□□□ -1.74
RFX3-209ENST00000451859 CASC2Q6XLA1 102 aa4.15□□□□□ -1.75
RFX3-209ENST00000451859 HCG22E2RYF7 251 aa4.14□□□□□ -1.75
RFX3-209ENST00000451859 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
RFX3-209ENST00000451859 Q5W150 140 aa4.14□□□□□ -1.75
RFX3-209ENST00000451859 C7orf65Q6ZTY9 151 aa4.14□□□□□ -1.75
RFX3-209ENST00000451859 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
RFX3-209ENST00000451859 C4orf26Q17RF5 130 aa4.1□□□□□ -1.75
RFX3-209ENST00000451859 COL5A1-AS1Q5SY13 56 aa4.1□□□□□ -1.75
RFX3-209ENST00000451859 UBL5Q9BZL1 73 aa4.1□□□□□ -1.75
RFX3-209ENST00000451859 LINC00846Q9NV44 126 aa4.1□□□□□ -1.75
RFX3-209ENST00000451859 K7EP34 96 aa4.08□□□□□ -1.76
RFX3-209ENST00000451859 PRO0461Q9UI25 63 aa4.08□□□□□ -1.76
RFX3-209ENST00000451859 CXCL6P80162 114 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms