RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 CCKP06307 115 aa8.49□□□□□ -1.05
PTPRN-209ENST00000451506 SYNE2Q8WXH0 6885 aaKnown RBP8.48□□□□□ -1.05
PTPRN-209ENST00000451506 A0A1B0GV72 72 aa8.48□□□□□ -1.05
PTPRN-209ENST00000451506 LYRM7Q5U5X0 104 aa8.48□□□□□ -1.05
PTPRN-209ENST00000451506 HRES1P13985 223 aa8.47□□□□□ -1.05
PTPRN-209ENST00000451506 ATXN8Q156A1 80 aa8.47□□□□□ -1.05
PTPRN-209ENST00000451506 C21orf62-AS1Q17RA5 79 aa8.47□□□□□ -1.05
PTPRN-209ENST00000451506 SIGMAR1Q99720 223 aa8.47□□□□□ -1.05
PTPRN-209ENST00000451506 RBM3P98179 157 aaKnown RBP8.46□□□□□ -1.06
PTPRN-209ENST00000451506 DSCR8Q96T75 97 aa8.46□□□□□ -1.06
PTPRN-209ENST00000451506 RBM12B-AS1Q9P1G2 102 aa8.44□□□□□ -1.06
PTPRN-209ENST00000451506 BAALC-AS2P0C853 105 aa8.43□□□□□ -1.06
PTPRN-209ENST00000451506 LINC00313P59037 77 aa8.42□□□□□ -1.06
PTPRN-209ENST00000451506 IGKV4-1P06312 121 aa8.41□□□□□ -1.06
PTPRN-209ENST00000451506 C9JAW5 83 aa8.4□□□□□ -1.06
PTPRN-209ENST00000451506 NOTCH2NLQ7Z3S9 236 aa8.4□□□□□ -1.06
PTPRN-209ENST00000451506 VPS25Q9BRG1 176 aa8.4□□□□□ -1.06
PTPRN-209ENST00000451506 JMJD7-PLA2G4BH0Y9G9 81 aa8.39□□□□□ -1.07
PTPRN-209ENST00000451506 NAA38Q9BRA0 125 aaKnown RBP8.39□□□□□ -1.07
PTPRN-209ENST00000451506 LOC105371267A0A1B0GV96 52 aa8.38□□□□□ -1.07
PTPRN-209ENST00000451506 LINC00472Q9H8W2 130 aa8.38□□□□□ -1.07
PTPRN-209ENST00000451506 KRTAP19-6Q3LI70 58 aa8.37□□□□□ -1.07
PTPRN-209ENST00000451506 A0A1B0GW54 56 aa8.36□□□□□ -1.07
PTPRN-209ENST00000451506 PDE6GP18545 87 aa8.36□□□□□ -1.07
PTPRN-209ENST00000451506 BATFQ16520 125 aa8.36□□□□□ -1.07
PTPRN-209ENST00000451506 LOC110117498A0A087WWA1 95 aa8.34□□□□□ -1.07
PTPRN-209ENST00000451506 J3KT08 172 aa8.34□□□□□ -1.07
PTPRN-209ENST00000451506 LINC00846Q9NV44 126 aa8.33□□□□□ -1.08
PTPRN-209ENST00000451506 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
PTPRN-209ENST00000451506 Q6ZQT0 140 aa8.31□□□□□ -1.08
PTPRN-209ENST00000451506 DEFB116Q30KQ4 102 aa8.3□□□□□ -1.08
PTPRN-209ENST00000451506 IGHV6-1A0A0B4J1U7 121 aa8.29□□□□□ -1.08
PTPRN-209ENST00000451506 A0A1B0GVX0 72 aa8.29□□□□□ -1.08
PTPRN-209ENST00000451506 C9orf118A6NHY6 69 aa8.29□□□□□ -1.08
PTPRN-209ENST00000451506 H3BT86 120 aa8.27□□□□□ -1.09
PTPRN-209ENST00000451506 MTURNQ8N3F0 131 aa8.27□□□□□ -1.09
PTPRN-209ENST00000451506 A0A1W2PPM0 123 aa8.26□□□□□ -1.09
PTPRN-209ENST00000451506 C14orf132Q9NPU4 83 aa8.26□□□□□ -1.09
PTPRN-209ENST00000451506 NDUFB1O75438 58 aa8.25□□□□□ -1.09
PTPRN-209ENST00000451506 TAX1BP3O14907 124 aa8.24□□□□□ -1.09
PTPRN-209ENST00000451506 SPINK7P58062 85 aa8.21□□□□□ -1.1
PTPRN-209ENST00000451506 KRTAP6-3Q3LI67 103 aa8.21□□□□□ -1.1
PTPRN-209ENST00000451506 ZCCHC13Q8WW36 166 aaKnown RBP8.2□□□□□ -1.1
PTPRN-209ENST00000451506 A8MWP4 228 aa8.19□□□□□ -1.1
PTPRN-209ENST00000451506 NREPQ16612 68 aa8.16□□□□□ -1.1
PTPRN-209ENST00000451506 SPCS1Q9Y6A9 102 aa8.16□□□□□ -1.1
PTPRN-209ENST00000451506 COL5A1-AS1Q5SY13 56 aa8.15□□□□□ -1.1
PTPRN-209ENST00000451506 Q8N9P0 234 aaPredicted RBP8.14□□□□□ -1.11
PTPRN-209ENST00000451506 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
PTPRN-209ENST00000451506 IGKV3D-7A0A0C4DH55 119 aa8.12□□□□□ -1.11
PTPRN-209ENST00000451506 PRR15Q8IV56 129 aa8.11□□□□□ -1.11
PTPRN-209ENST00000451506 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
PTPRN-209ENST00000451506 Q6ZVQ6 151 aa8.07□□□□□ -1.12
PTPRN-209ENST00000451506 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
PTPRN-209ENST00000451506 K7EP34 96 aa8.04□□□□□ -1.12
PTPRN-209ENST00000451506 MMP24-AS1A0A0U1RRL7 71 aa8.03□□□□□ -1.12
PTPRN-209ENST00000451506 BPY2O14599 106 aa8.03□□□□□ -1.12
PTPRN-209ENST00000451506 K7EQZ3 153 aa8.01□□□□□ -1.13
PTPRN-209ENST00000451506 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
PTPRN-209ENST00000451506 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
PTPRN-209ENST00000451506 hDV103S1A0JD37 113 aa8□□□□□ -1.13
PTPRN-209ENST00000451506 PRO0461Q9UI25 63 aa8□□□□□ -1.13
PTPRN-209ENST00000451506 NEBP20929 6669 aa8□□□□□ -1.13
PTPRN-209ENST00000451506 GTF2H5Q6ZYL4 71 aa7.99□□□□□ -1.13
PTPRN-209ENST00000451506 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
PTPRN-209ENST00000451506 UBL5Q9BZL1 73 aa7.95□□□□□ -1.14
PTPRN-209ENST00000451506 NDUFS5O43920 106 aa7.93□□□□□ -1.14
PTPRN-209ENST00000451506 PCP4L1A6NKN8 68 aa7.91□□□□□ -1.14
PTPRN-209ENST00000451506 F8W1H4 67 aa7.9□□□□□ -1.14
PTPRN-209ENST00000451506 CASC2Q6XLA1 102 aa7.89□□□□□ -1.15
PTPRN-209ENST00000451506 Q8N9L7 120 aa7.87□□□□□ -1.15
PTPRN-209ENST00000451506 C7orf65Q6ZTY9 151 aa7.84□□□□□ -1.15
PTPRN-209ENST00000451506 MUC12Q9UKN1 5478 aa7.84□□□□□ -1.15
PTPRN-209ENST00000451506 CXCL6P80162 114 aa7.83□□□□□ -1.16
PTPRN-209ENST00000451506 HCG22E2RYF7 251 aa7.82□□□□□ -1.16
PTPRN-209ENST00000451506 ETDBQ3ZM63 59 aa7.82□□□□□ -1.16
PTPRN-209ENST00000451506 A6NN06 94 aa7.81□□□□□ -1.16
PTPRN-209ENST00000451506 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
PTPRN-209ENST00000451506 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
PTPRN-209ENST00000451506 MT1BP07438 61 aa7.78□□□□□ -1.16
PTPRN-209ENST00000451506 KRTAP20-1Q3LI63 56 aa7.76□□□□□ -1.17
PTPRN-209ENST00000451506 Q5W150 140 aa7.76□□□□□ -1.17
PTPRN-209ENST00000451506 ACYP1P07311 99 aa7.72□□□□□ -1.17
PTPRN-209ENST00000451506 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
PTPRN-209ENST00000451506 FAM240AA0A1B0GVK7 77 aa7.71□□□□□ -1.18
PTPRN-209ENST00000451506 KRTAP19-8Q3LI54 63 aa7.7□□□□□ -1.18
PTPRN-209ENST00000451506 Q5VV11 94 aa7.7□□□□□ -1.18
PTPRN-209ENST00000451506 KRTAP5-9P26371 169 aa7.68□□□□□ -1.18
PTPRN-209ENST00000451506 ATP5EP2Q5VTU8 51 aa7.68□□□□□ -1.18
PTPRN-209ENST00000451506 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
PTPRN-209ENST00000451506 FAM236AA0A1B0GUQ0 79 aa7.67□□□□□ -1.18
PTPRN-209ENST00000451506 FAM236BA0A1B0GV22 79 aa7.67□□□□□ -1.18
PTPRN-209ENST00000451506 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
PTPRN-209ENST00000451506 C4orf26Q17RF5 130 aa7.67□□□□□ -1.18
PTPRN-209ENST00000451506 C5orf47Q569G3 176 aa7.67□□□□□ -1.18
PTPRN-209ENST00000451506 KMT2DO14686 5537 aa7.6□□□□□ -1.19
PTPRN-209ENST00000451506 KRTAP3-1Q9BYR8 98 aa7.59□□□□□ -1.19
PTPRN-209ENST00000451506 MDN1Q9NU22 5596 aa7.58□□□□□ -1.2
PTPRN-209ENST00000451506 CSAG1Q6PB30 78 aa7.56□□□□□ -1.2
PTPRN-209ENST00000451506 TRAV22A0A0B4J277 110 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms