RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 DNAH11Q96DT5 4516 aa13.12□□□□□ -0.31
TTC3-210ENST00000450533 SPINK6Q6UWN8 80 aa13.12□□□□□ -0.31
TTC3-210ENST00000450533 ALMS1Q8TCU4 4167 aa13.12□□□□□ -0.31
TTC3-210ENST00000450533 TP53AIP1Q9HCN2 124 aa13.12□□□□□ -0.31
TTC3-210ENST00000450533 DNAH5Q8TE73 4624 aa13.11□□□□□ -0.31
TTC3-210ENST00000450533 CIRBP-AS1Q8TBR5 109 aa13.1□□□□□ -0.31
TTC3-210ENST00000450533 MRPL34Q9BQ48 92 aaKnown RBP13.07□□□□□ -0.32
TTC3-210ENST00000450533 KRTAP10-2P60368 255 aa13.06□□□□□ -0.32
TTC3-210ENST00000450533 CD164Q04900 197 aa13.05□□□□□ -0.32
TTC3-210ENST00000450533 IGLV7-46A0A075B6I9 117 aa13.03□□□□□ -0.32
TTC3-210ENST00000450533 A8MUN3 132 aa13□□□□□ -0.33
TTC3-210ENST00000450533 COA5Q86WW8 74 aa12.98□□□□□ -0.33
TTC3-210ENST00000450533 LRP1BQ9NZR2 4599 aa12.94□□□□□ -0.34
TTC3-210ENST00000450533 Q8N9P0 234 aaPredicted RBP12.94□□□□□ -0.34
TTC3-210ENST00000450533 V9GYY9 64 aa12.94□□□□□ -0.34
TTC3-210ENST00000450533 HYDINQ4G0P3 5121 aa12.93□□□□□ -0.34
TTC3-210ENST00000450533 Q5W150 140 aa12.91□□□□□ -0.34
TTC3-210ENST00000450533 SSBP3-AS1Q7Z2R9 100 aa12.91□□□□□ -0.34
TTC3-210ENST00000450533 PKD1P98161 4303 aa12.89□□□□□ -0.35
TTC3-210ENST00000450533 Q5VV11 94 aa12.88□□□□□ -0.35
TTC3-210ENST00000450533 KRTAP10-1P60331 282 aa12.88□□□□□ -0.35
TTC3-210ENST00000450533 FAT2Q9NYQ8 4349 aa12.85□□□□□ -0.35
TTC3-210ENST00000450533 KRTAP13-2Q52LG2 175 aa12.85□□□□□ -0.35
TTC3-210ENST00000450533 PRR15LQ9BU68 103 aa12.85□□□□□ -0.35
TTC3-210ENST00000450533 LIMD2Q9BT23 127 aa12.84□□□□□ -0.35
TTC3-210ENST00000450533 C1orf195Q5TG92 126 aa12.83□□□□□ -0.36
TTC3-210ENST00000450533 KRTAP13-3Q3SY46 172 aa12.81□□□□□ -0.36
TTC3-210ENST00000450533 Q6ZSA8 131 aa12.81□□□□□ -0.36
TTC3-210ENST00000450533 LOC101927531A0A1B0GV80 90 aa12.8□□□□□ -0.36
TTC3-210ENST00000450533 HRES1P13985 223 aa12.79□□□□□ -0.36
TTC3-210ENST00000450533 A8MU10 97 aa12.79□□□□□ -0.36
TTC3-210ENST00000450533 CHKB-CPT1BH3BT56 60 aa12.78□□□□□ -0.36
TTC3-210ENST00000450533 C8orf87E5RJ46 101 aa12.77□□□□□ -0.37
TTC3-210ENST00000450533 VPS13BQ7Z7G8 4022 aa12.76□□□□□ -0.37
TTC3-210ENST00000450533 LINC00313P59037 77 aa12.76□□□□□ -0.37
TTC3-210ENST00000450533 SPAG11AQ6PDA7 123 aa12.76□□□□□ -0.37
TTC3-210ENST00000450533 RETNLBQ9BQ08 111 aa12.76□□□□□ -0.37
TTC3-210ENST00000450533 KRTAP1-4P0C5Y4 121 aa12.7□□□□□ -0.38
TTC3-210ENST00000450533 Q75L30 129 aa12.65□□□□□ -0.38
TTC3-210ENST00000450533 PRR26Q8N8Z3 221 aa12.63□□□□□ -0.39
TTC3-210ENST00000450533 LINC01558Q9Y6Z2 57 aa12.63□□□□□ -0.39
TTC3-210ENST00000450533 FAM229AH3BQW9 127 aa12.62□□□□□ -0.39
TTC3-210ENST00000450533 A6NED7 52 aa12.62□□□□□ -0.39
TTC3-210ENST00000450533 PKHD1P08F94 4074 aa12.6□□□□□ -0.39
TTC3-210ENST00000450533 PLA2G1BP04054 148 aaKnown RBP12.6□□□□□ -0.39
TTC3-210ENST00000450533 KRTAP16-1A8MUX0 517 aa12.59□□□□□ -0.39
TTC3-210ENST00000450533 LCA10Q71F78 164 aa12.56□□□□□ -0.4
TTC3-210ENST00000450533 ACYP2P14621 99 aa12.55□□□□□ -0.4
TTC3-210ENST00000450533 TYMSOSQ8TAI1 123 aa12.54□□□□□ -0.4
TTC3-210ENST00000450533 IGKV2-30P06310 120 aa12.53□□□□□ -0.4
TTC3-210ENST00000450533 C4orf48Q5BLP8 95 aa12.53□□□□□ -0.4
TTC3-210ENST00000450533 DMAC1Q96GE9 116 aa12.5□□□□□ -0.41
TTC3-210ENST00000450533 SPTSSBQ8NFR3 76 aa12.49□□□□□ -0.41
TTC3-210ENST00000450533 SACSQ9NZJ4 4579 aa12.47□□□□□ -0.41
TTC3-210ENST00000450533 IGKV2D-30A0A075B6S6 120 aa12.47□□□□□ -0.41
TTC3-210ENST00000450533 PMAIP1Q13794 54 aa12.47□□□□□ -0.41
TTC3-210ENST00000450533 SPINK7P58062 85 aa12.46□□□□□ -0.41
TTC3-210ENST00000450533 SPINK1P00995 79 aa12.44□□□□□ -0.42
TTC3-210ENST00000450533 CDC42SE1Q9NRR8 79 aa12.42□□□□□ -0.42
TTC3-210ENST00000450533 SMR3BP02814 79 aaPredicted RBP12.39□□□□□ -0.43
TTC3-210ENST00000450533 DYNC1H1Q14204 4646 aaKnown RBP12.38□□□□□ -0.43
TTC3-210ENST00000450533 ATP11AUNQ6ZP68 121 aa12.36□□□□□ -0.43
TTC3-210ENST00000450533 LINC00304Q8N9R0 145 aa12.35□□□□□ -0.43
TTC3-210ENST00000450533 FAT1Q14517 4588 aa12.33□□□□□ -0.44
TTC3-210ENST00000450533 C7orf65Q6ZTY9 151 aa12.29□□□□□ -0.44
TTC3-210ENST00000450533 A0A1B0GU69 56 aa12.23□□□□□ -0.45
TTC3-210ENST00000450533 APOBP04114 4563 aaKnown RBP12.21□□□□□ -0.45
TTC3-210ENST00000450533 A6NN06 94 aa12.2□□□□□ -0.46
TTC3-210ENST00000450533 RPS29P62273 56 aaKnown RBP12.2□□□□□ -0.46
TTC3-210ENST00000450533 C9orf92A6NGG3 77 aa12.19□□□□□ -0.46
TTC3-210ENST00000450533 Q8N1X5 172 aa12.18□□□□□ -0.46
TTC3-210ENST00000450533 KRTAP21-3Q3LHN1 58 aa12.17□□□□□ -0.46
TTC3-210ENST00000450533 PKHD1L1Q86WI1 4243 aa12.14□□□□□ -0.47
TTC3-210ENST00000450533 A0A1B0GVY2 172 aa12.13□□□□□ -0.47
TTC3-210ENST00000450533 KTN1-AS1Q86SY8 53 aa12.13□□□□□ -0.47
TTC3-210ENST00000450533 KRTAP10-4P60372 401 aaPredicted RBP12.12□□□□□ -0.47
TTC3-210ENST00000450533 RYR2Q92736 4967 aa12.03□□□□□ -0.48
TTC3-210ENST00000450533 SEC61GP60059 68 aa12.02□□□□□ -0.48
TTC3-210ENST00000450533 C20orf166-AS1Q96NR2 134 aa12.01□□□□□ -0.49
TTC3-210ENST00000450533 A8MUU9 505 aa12.01□□□□□ -0.49
TTC3-210ENST00000450533 KMT2CQ8NEZ4 4911 aaKnown RBP11.99□□□□□ -0.49
TTC3-210ENST00000450533 UQCR11O14957 56 aa11.97□□□□□ -0.49
TTC3-210ENST00000450533 SPATA8Q6RVD6 105 aa11.97□□□□□ -0.49
TTC3-210ENST00000450533 MIR22HGQ0VDD5 57 aa11.96□□□□□ -0.49
TTC3-210ENST00000450533 FLG2Q5D862 2391 aaPredicted RBP11.89□□□□□ -0.51
TTC3-210ENST00000450533 KRTAP3-1Q9BYR8 98 aa11.88□□□□□ -0.51
TTC3-210ENST00000450533 LRP1Q07954 4544 aaKnown RBP11.86□□□□□ -0.51
TTC3-210ENST00000450533 RBM12B-AS1Q9P1G2 102 aa11.84□□□□□ -0.51
TTC3-210ENST00000450533 FAT3Q8TDW7 4589 aa11.79□□□□□ -0.52
TTC3-210ENST00000450533 TNXBP22105 4242 aa11.76□□□□□ -0.53
TTC3-210ENST00000450533 ADM2Q7Z4H4 148 aa11.74□□□□□ -0.53
TTC3-210ENST00000450533 PRAC1Q96KF2 57 aa11.74□□□□□ -0.53
TTC3-210ENST00000450533 HSPG2P98160 4391 aa11.69□□□□□ -0.54
TTC3-210ENST00000450533 DMBT1Q9UGM3 2413 aaPredicted RBP11.65□□□□□ -0.54
TTC3-210ENST00000450533 Q5VSD8 79 aa11.64□□□□□ -0.55
TTC3-210ENST00000450533 COX6B2Q6YFQ2 88 aa11.64□□□□□ -0.55
TTC3-210ENST00000450533 KRTAP10-8P60410 259 aa11.64□□□□□ -0.55
TTC3-210ENST00000450533 H0YAA0 97 aa11.63□□□□□ -0.55
TTC3-210ENST00000450533 MYCBP2O75592 4640 aa11.63□□□□□ -0.55
TTC3-210ENST00000450533 RYR3Q15413 4870 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms