RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 LOC110117498A0A087WWA1 95 aa6.57□□□□□ -1.36
PRPF40A-203ENST00000448428 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
PRPF40A-203ENST00000448428 A0A1B0GVX0 72 aa6.56□□□□□ -1.36
PRPF40A-203ENST00000448428 C9orf118A6NHY6 69 aa6.56□□□□□ -1.36
PRPF40A-203ENST00000448428 TAX1BP3O14907 124 aa6.55□□□□□ -1.36
PRPF40A-203ENST00000448428 C14orf132Q9NPU4 83 aa6.55□□□□□ -1.36
PRPF40A-203ENST00000448428 A0A1B0GW54 56 aa6.54□□□□□ -1.36
PRPF40A-203ENST00000448428 C8orf87E5RJ46 101 aa6.54□□□□□ -1.36
PRPF40A-203ENST00000448428 J3KT08 172 aa6.54□□□□□ -1.36
PRPF40A-203ENST00000448428 M0R2T5 61 aa6.54□□□□□ -1.36
PRPF40A-203ENST00000448428 PDE6GP18545 87 aa6.54□□□□□ -1.36
PRPF40A-203ENST00000448428 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
PRPF40A-203ENST00000448428 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
PRPF40A-203ENST00000448428 A0A1W2PPM0 123 aa6.52□□□□□ -1.37
PRPF40A-203ENST00000448428 NDUFB1O75438 58 aa6.49□□□□□ -1.37
PRPF40A-203ENST00000448428 MTURNQ8N3F0 131 aa6.49□□□□□ -1.37
PRPF40A-203ENST00000448428 H3BT86 120 aa6.48□□□□□ -1.37
PRPF40A-203ENST00000448428 A8MWP4 228 aa6.47□□□□□ -1.37
PRPF40A-203ENST00000448428 FLGP20930 4061 aaPredicted RBP6.47□□□□□ -1.37
PRPF40A-203ENST00000448428 IGKV3D-7A0A0C4DH55 119 aa6.46□□□□□ -1.38
PRPF40A-203ENST00000448428 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
PRPF40A-203ENST00000448428 NREPQ16612 68 aa6.46□□□□□ -1.38
PRPF40A-203ENST00000448428 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
PRPF40A-203ENST00000448428 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
PRPF40A-203ENST00000448428 KRTAP9-6A0A140TA67 174 aa6.44□□□□□ -1.38
PRPF40A-203ENST00000448428 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
PRPF40A-203ENST00000448428 HRES1P13985 223 aa6.43□□□□□ -1.38
PRPF40A-203ENST00000448428 ZCCHC13Q8WW36 166 aaKnown RBP6.43□□□□□ -1.38
PRPF40A-203ENST00000448428 SPCS1Q9Y6A9 102 aa6.43□□□□□ -1.38
PRPF40A-203ENST00000448428 PRR15Q8IV56 129 aa6.42□□□□□ -1.38
PRPF40A-203ENST00000448428 MPLKIPQ8TAP9 179 aa6.42□□□□□ -1.38
PRPF40A-203ENST00000448428 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.38
PRPF40A-203ENST00000448428 FAM236DA0A1B0GTK5 79 aa6.39□□□□□ -1.39
PRPF40A-203ENST00000448428 FAM236CP0DP71 79 aa6.39□□□□□ -1.39
PRPF40A-203ENST00000448428 COL5A1-AS1Q5SY13 56 aa6.39□□□□□ -1.39
PRPF40A-203ENST00000448428 Q6ZVQ6 151 aa6.39□□□□□ -1.39
PRPF40A-203ENST00000448428 RBM12B-AS1Q9P1G2 102 aa6.39□□□□□ -1.39
PRPF40A-203ENST00000448428 SPINK7P58062 85 aa6.38□□□□□ -1.39
PRPF40A-203ENST00000448428 MMP24-AS1A0A0U1RRL7 71 aa6.36□□□□□ -1.39
PRPF40A-203ENST00000448428 K7EQZ3 153 aa6.35□□□□□ -1.39
PRPF40A-203ENST00000448428 TMEM254Q8TBM7 123 aa6.35□□□□□ -1.39
PRPF40A-203ENST00000448428 MRPL34Q9BQ48 92 aaKnown RBP6.34□□□□□ -1.39
PRPF40A-203ENST00000448428 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
PRPF40A-203ENST00000448428 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.39
PRPF40A-203ENST00000448428 PRO0461Q9UI25 63 aa6.34□□□□□ -1.39
PRPF40A-203ENST00000448428 K7EP34 96 aa6.33□□□□□ -1.4
PRPF40A-203ENST00000448428 BPY2O14599 106 aa6.33□□□□□ -1.4
PRPF40A-203ENST00000448428 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
PRPF40A-203ENST00000448428 LCE2BO14633 110 aa6.32□□□□□ -1.4
PRPF40A-203ENST00000448428 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
PRPF40A-203ENST00000448428 NDUFS5O43920 106 aa6.28□□□□□ -1.4
PRPF40A-203ENST00000448428 Q8N9L7 120 aa6.28□□□□□ -1.4
PRPF40A-203ENST00000448428 WFDC13Q8IUB5 93 aa6.27□□□□□ -1.41
PRPF40A-203ENST00000448428 LINC00846Q9NV44 126 aa6.27□□□□□ -1.41
PRPF40A-203ENST00000448428 GTF2H5Q6ZYL4 71 aa6.25□□□□□ -1.41
PRPF40A-203ENST00000448428 MT2AP02795 61 aa6.24□□□□□ -1.41
PRPF40A-203ENST00000448428 Q5W150 140 aa6.24□□□□□ -1.41
PRPF40A-203ENST00000448428 CASC2Q6XLA1 102 aa6.24□□□□□ -1.41
PRPF40A-203ENST00000448428 UBL5Q9BZL1 73 aa6.24□□□□□ -1.41
PRPF40A-203ENST00000448428 F8W1H4 67 aa6.22□□□□□ -1.41
PRPF40A-203ENST00000448428 HCG22E2RYF7 251 aa6.2□□□□□ -1.42
PRPF40A-203ENST00000448428 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
PRPF40A-203ENST00000448428 MT1FP04733 61 aa6.19□□□□□ -1.42
PRPF40A-203ENST00000448428 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
PRPF40A-203ENST00000448428 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
PRPF40A-203ENST00000448428 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
PRPF40A-203ENST00000448428 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
PRPF40A-203ENST00000448428 CXCL6P80162 114 aa6.15□□□□□ -1.42
PRPF40A-203ENST00000448428 C7orf65Q6ZTY9 151 aa6.15□□□□□ -1.42
PRPF40A-203ENST00000448428 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
PRPF40A-203ENST00000448428 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
PRPF40A-203ENST00000448428 C4orf26Q17RF5 130 aa6.09□□□□□ -1.43
PRPF40A-203ENST00000448428 TP53AIP1Q9HCN2 124 aa6.05□□□□□ -1.44
PRPF40A-203ENST00000448428 ACYP1P07311 99 aa6.04□□□□□ -1.44
PRPF40A-203ENST00000448428 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
PRPF40A-203ENST00000448428 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
PRPF40A-203ENST00000448428 C1orf64Q8NEQ6 169 aa5.98□□□□□ -1.45
PRPF40A-203ENST00000448428 USH2AO75445 5202 aa5.98□□□□□ -1.45
PRPF40A-203ENST00000448428 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.46
PRPF40A-203ENST00000448428 ATP5EP2Q5VTU8 51 aa5.95□□□□□ -1.46
PRPF40A-203ENST00000448428 CYP4F30PQ9H0H9 118 aa5.95□□□□□ -1.46
PRPF40A-203ENST00000448428 A0A1B0GV90 55 aa5.94□□□□□ -1.46
PRPF40A-203ENST00000448428 HIST1H4AP62805 103 aaKnown RBP5.94□□□□□ -1.46
PRPF40A-203ENST00000448428 C5orf47Q569G3 176 aa5.94□□□□□ -1.46
PRPF40A-203ENST00000448428 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
PRPF40A-203ENST00000448428 TRAV22A0A0B4J277 110 aa5.92□□□□□ -1.46
PRPF40A-203ENST00000448428 S4R3F8 94 aa5.92□□□□□ -1.46
PRPF40A-203ENST00000448428 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-203ENST00000448428 LCA10Q71F78 164 aa5.9□□□□□ -1.46
PRPF40A-203ENST00000448428 LINC00643Q86TS7 51 aa5.9□□□□□ -1.46
PRPF40A-203ENST00000448428 LOC101927531A0A1B0GV80 90 aa5.88□□□□□ -1.47
PRPF40A-203ENST00000448428 UQCRQO14949 82 aa5.88□□□□□ -1.47
PRPF40A-203ENST00000448428 CSAG1Q6PB30 78 aa5.88□□□□□ -1.47
PRPF40A-203ENST00000448428 A0A087WVE0 104 aa5.87□□□□□ -1.47
PRPF40A-203ENST00000448428 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
PRPF40A-203ENST00000448428 H0Y9P7 68 aa5.85□□□□□ -1.47
PRPF40A-203ENST00000448428 FAM236AA0A1B0GUQ0 79 aa5.83□□□□□ -1.48
PRPF40A-203ENST00000448428 FAM236BA0A1B0GV22 79 aa5.83□□□□□ -1.48
PRPF40A-203ENST00000448428 ATOX1O00244 68 aa5.82□□□□□ -1.48
PRPF40A-203ENST00000448428 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms