RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 RAB37Q96AX2 223 aa3.62□□□□□ -1.83
LRRC28-203ENST00000447360 TRBV7-7A0A0K0K1E9 115 aa3.61□□□□□ -1.83
LRRC28-203ENST00000447360 TCL1BO95988 128 aa3.61□□□□□ -1.83
LRRC28-203ENST00000447360 FXYD2P54710 66 aa3.61□□□□□ -1.83
LRRC28-203ENST00000447360 NDUFV3P56181 108 aaKnown RBP3.61□□□□□ -1.83
LRRC28-203ENST00000447360 Q6JHZ5 121 aa3.61□□□□□ -1.83
LRRC28-203ENST00000447360 PPDPFLQ8WWR9 84 aa3.61□□□□□ -1.83
LRRC28-203ENST00000447360 SNHG12Q9BXW3 62 aa3.61□□□□□ -1.83
LRRC28-203ENST00000447360 KRTAP10-10P60014 251 aa3.6□□□□□ -1.83
LRRC28-203ENST00000447360 LYRM7Q5U5X0 104 aa3.6□□□□□ -1.83
LRRC28-203ENST00000447360 CLEC2BQ92478 149 aa3.6□□□□□ -1.83
LRRC28-203ENST00000447360 PRO1854Q9UHT4 67 aa3.6□□□□□ -1.83
LRRC28-203ENST00000447360 A0A1B0GX51 115 aa3.59□□□□□ -1.83
LRRC28-203ENST00000447360 H3BUT2 72 aa3.59□□□□□ -1.83
LRRC28-203ENST00000447360 TRBV20-1A0A075B6N2 111 aa3.58□□□□□ -1.84
LRRC28-203ENST00000447360 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
LRRC28-203ENST00000447360 COL5A1-AS1Q5SY13 56 aa3.57□□□□□ -1.84
LRRC28-203ENST00000447360 H3BQ85 93 aa3.56□□□□□ -1.84
LRRC28-203ENST00000447360 SNCGO76070 127 aa3.56□□□□□ -1.84
LRRC28-203ENST00000447360 COX6CP09669 75 aa3.56□□□□□ -1.84
LRRC28-203ENST00000447360 H3BMG7 143 aa3.55□□□□□ -1.84
LRRC28-203ENST00000447360 K7ERJ3 54 aa3.55□□□□□ -1.84
LRRC28-203ENST00000447360 LST1O00453 97 aa3.55□□□□□ -1.84
LRRC28-203ENST00000447360 FABP2P12104 132 aa3.55□□□□□ -1.84
LRRC28-203ENST00000447360 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
LRRC28-203ENST00000447360 TEN1Q86WV5 123 aa3.55□□□□□ -1.84
LRRC28-203ENST00000447360 A0A1W2PNM2 257 aa3.54□□□□□ -1.84
LRRC28-203ENST00000447360 OBSCN-AS1Q96MR7 158 aa3.54□□□□□ -1.84
LRRC28-203ENST00000447360 Q96NJ1 140 aa3.54□□□□□ -1.84
LRRC28-203ENST00000447360 A0A087WSZ3 146 aa3.53□□□□□ -1.84
LRRC28-203ENST00000447360 TRACP01848 142 aa3.53□□□□□ -1.84
LRRC28-203ENST00000447360 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
LRRC28-203ENST00000447360 C20orf166-AS1Q96NR2 134 aa3.53□□□□□ -1.84
LRRC28-203ENST00000447360 PSMB2P49721 201 aa3.52□□□□□ -1.85
LRRC28-203ENST00000447360 SS18L2Q9UHA2 77 aa3.52□□□□□ -1.85
LRRC28-203ENST00000447360 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
LRRC28-203ENST00000447360 TMEM256-PLSCR3K7ERE1 68 aa3.51□□□□□ -1.85
LRRC28-203ENST00000447360 TAX1BP3O14907 124 aa3.51□□□□□ -1.85
LRRC28-203ENST00000447360 ANKRD29Q8N6D5 301 aa3.51□□□□□ -1.85
LRRC28-203ENST00000447360 ORMDL1Q9P0S3 153 aa3.51□□□□□ -1.85
LRRC28-203ENST00000447360 TRBV7-4A0A0J9YYF1 115 aa3.5□□□□□ -1.85
LRRC28-203ENST00000447360 FAM236DA0A1B0GTK5 79 aa3.5□□□□□ -1.85
LRRC28-203ENST00000447360 A0A1W2PPM0 123 aa3.5□□□□□ -1.85
LRRC28-203ENST00000447360 DNAL4O96015 105 aa3.5□□□□□ -1.85
LRRC28-203ENST00000447360 FAM236CP0DP71 79 aa3.5□□□□□ -1.85
LRRC28-203ENST00000447360 BATFQ16520 125 aa3.5□□□□□ -1.85
LRRC28-203ENST00000447360 A0A1B0GV72 72 aa3.49□□□□□ -1.85
LRRC28-203ENST00000447360 A8MUU9 505 aa3.49□□□□□ -1.85
LRRC28-203ENST00000447360 ATXN8Q156A1 80 aa3.49□□□□□ -1.85
LRRC28-203ENST00000447360 Q8N9P0 234 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-203ENST00000447360 LINC00472Q9H8W2 130 aa3.49□□□□□ -1.85
LRRC28-203ENST00000447360 SCGB1C2P0DMR2 95 aa3.48□□□□□ -1.85
LRRC28-203ENST00000447360 DSCR10P59022 87 aa3.48□□□□□ -1.85
LRRC28-203ENST00000447360 GTF2H5Q6ZYL4 71 aa3.48□□□□□ -1.85
LRRC28-203ENST00000447360 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
LRRC28-203ENST00000447360 KRTAP16-1A8MUX0 517 aa3.47□□□□□ -1.85
LRRC28-203ENST00000447360 H3BT86 120 aa3.47□□□□□ -1.85
LRRC28-203ENST00000447360 CCKP06307 115 aa3.47□□□□□ -1.85
LRRC28-203ENST00000447360 DEFB116Q30KQ4 102 aa3.47□□□□□ -1.85
LRRC28-203ENST00000447360 RBM12B-AS1Q9P1G2 102 aa3.47□□□□□ -1.85
LRRC28-203ENST00000447360 K7EP34 96 aa3.46□□□□□ -1.86
LRRC28-203ENST00000447360 IGKV4-1P06312 121 aa3.46□□□□□ -1.86
LRRC28-203ENST00000447360 BAALC-AS2P0C853 105 aa3.46□□□□□ -1.86
LRRC28-203ENST00000447360 RBM3P98179 157 aaKnown RBP3.46□□□□□ -1.86
LRRC28-203ENST00000447360 A0A1B0GW54 56 aa3.45□□□□□ -1.86
LRRC28-203ENST00000447360 LINC00313P59037 77 aa3.45□□□□□ -1.86
LRRC28-203ENST00000447360 NAA38Q9BRA0 125 aaKnown RBP3.45□□□□□ -1.86
LRRC28-203ENST00000447360 SPCS1Q9Y6A9 102 aa3.45□□□□□ -1.86
LRRC28-203ENST00000447360 JMJD7-PLA2G4BH0Y9G9 81 aa3.44□□□□□ -1.86
LRRC28-203ENST00000447360 PDE6GP18545 87 aa3.44□□□□□ -1.86
LRRC28-203ENST00000447360 SIGMAR1Q99720 223 aa3.44□□□□□ -1.86
LRRC28-203ENST00000447360 F8W1H4 67 aa3.43□□□□□ -1.86
LRRC28-203ENST00000447360 HRES1P13985 223 aa3.43□□□□□ -1.86
LRRC28-203ENST00000447360 DSCR8Q96T75 97 aa3.43□□□□□ -1.86
LRRC28-203ENST00000447360 VPS25Q9BRG1 176 aa3.43□□□□□ -1.86
LRRC28-203ENST00000447360 IGHV6-1A0A0B4J1U7 121 aa3.42□□□□□ -1.86
LRRC28-203ENST00000447360 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
LRRC28-203ENST00000447360 C9JAW5 83 aa3.42□□□□□ -1.86
LRRC28-203ENST00000447360 Q6ZQT0 140 aa3.42□□□□□ -1.86
LRRC28-203ENST00000447360 KMT2DO14686 5537 aa3.42□□□□□ -1.86
LRRC28-203ENST00000447360 A8MWP4 228 aa3.41□□□□□ -1.86
LRRC28-203ENST00000447360 CXCL6P80162 114 aa3.41□□□□□ -1.86
LRRC28-203ENST00000447360 A0A1B0GVX0 72 aa3.4□□□□□ -1.87
LRRC28-203ENST00000447360 PRO0461Q9UI25 63 aa3.4□□□□□ -1.87
LRRC28-203ENST00000447360 LOC110117498A0A087WWA1 95 aa3.39□□□□□ -1.87
LRRC28-203ENST00000447360 C8orf87E5RJ46 101 aa3.39□□□□□ -1.87
LRRC28-203ENST00000447360 V9GYY9 64 aa3.39□□□□□ -1.87
LRRC28-203ENST00000447360 J3KT08 172 aa3.38□□□□□ -1.87
LRRC28-203ENST00000447360 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
LRRC28-203ENST00000447360 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
LRRC28-203ENST00000447360 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
LRRC28-203ENST00000447360 C14orf132Q9NPU4 83 aa3.37□□□□□ -1.87
LRRC28-203ENST00000447360 IGKV3D-7A0A0C4DH55 119 aa3.36□□□□□ -1.87
LRRC28-203ENST00000447360 A0A1B0GV90 55 aa3.36□□□□□ -1.87
LRRC28-203ENST00000447360 FAM240AA0A1B0GVK7 77 aa3.36□□□□□ -1.87
LRRC28-203ENST00000447360 A6NN06 94 aa3.34□□□□□ -1.87
LRRC28-203ENST00000447360 J3QR89 54 aa3.34□□□□□ -1.87
LRRC28-203ENST00000447360 NDUFB1O75438 58 aa3.34□□□□□ -1.87
LRRC28-203ENST00000447360 ACYP1P07311 99 aa3.34□□□□□ -1.87
LRRC28-203ENST00000447360 ZCCHC13Q8WW36 166 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms