RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 F8W1H4 67 aa11.75□□□□□ -0.53
APOE-204ENST00000446996 C20orf166-AS1Q96NR2 134 aa11.75□□□□□ -0.53
APOE-204ENST00000446996 DSCR10P59022 87 aa11.74□□□□□ -0.53
APOE-204ENST00000446996 NREPQ16612 68 aa11.74□□□□□ -0.53
APOE-204ENST00000446996 KRTAP4-1Q9BYQ7 146 aa11.74□□□□□ -0.53
APOE-204ENST00000446996 A0A1B0GVX0 72 aa11.73□□□□□ -0.53
APOE-204ENST00000446996 A8MUU9 505 aa11.73□□□□□ -0.53
APOE-204ENST00000446996 C8orf87E5RJ46 101 aa11.73□□□□□ -0.53
APOE-204ENST00000446996 FAT4Q6V0I7 4981 aa11.72□□□□□ -0.53
APOE-204ENST00000446996 IGHV6-1A0A0B4J1U7 121 aa11.7□□□□□ -0.54
APOE-204ENST00000446996 NDUFB1O75438 58 aa11.7□□□□□ -0.54
APOE-204ENST00000446996 ATP11AUNQ6ZP68 121 aa11.69□□□□□ -0.54
APOE-204ENST00000446996 KRTAP16-1A8MUX0 517 aa11.67□□□□□ -0.54
APOE-204ENST00000446996 A8MWP4 228 aa11.67□□□□□ -0.54
APOE-204ENST00000446996 NOTCH2NLQ7Z3S9 236 aa11.66□□□□□ -0.54
APOE-204ENST00000446996 IGKV3D-7A0A0C4DH55 119 aa11.59□□□□□ -0.55
APOE-204ENST00000446996 ETDBQ3ZM63 59 aa11.59□□□□□ -0.55
APOE-204ENST00000446996 PRR15Q8IV56 129 aa11.59□□□□□ -0.55
APOE-204ENST00000446996 Q6ZVQ6 151 aa11.57□□□□□ -0.56
APOE-204ENST00000446996 C8orf17Q9NRJ1 99 aa11.56□□□□□ -0.56
APOE-204ENST00000446996 BPY2O14599 106 aa11.55□□□□□ -0.56
APOE-204ENST00000446996 LCE2AQ5TA79 106 aaPredicted RBP11.55□□□□□ -0.56
APOE-204ENST00000446996 UBL5Q9BZL1 73 aa11.53□□□□□ -0.56
APOE-204ENST00000446996 LINC00846Q9NV44 126 aa11.52□□□□□ -0.57
APOE-204ENST00000446996 Q8N9P0 234 aaPredicted RBP11.5□□□□□ -0.57
APOE-204ENST00000446996 K7EQZ3 153 aa11.47□□□□□ -0.57
APOE-204ENST00000446996 MMP24-AS1A0A0U1RRL7 71 aa11.45□□□□□ -0.58
APOE-204ENST00000446996 TMEM254Q8TBM7 123 aa11.44□□□□□ -0.58
APOE-204ENST00000446996 A0A1B0GV90 55 aa11.43□□□□□ -0.58
APOE-204ENST00000446996 KRTAP19-2Q3LHN2 52 aa11.43□□□□□ -0.58
APOE-204ENST00000446996 MRPL34Q9BQ48 92 aaKnown RBP11.4□□□□□ -0.58
APOE-204ENST00000446996 hDV103S1A0JD37 113 aa11.39□□□□□ -0.59
APOE-204ENST00000446996 ACYP1P07311 99 aa11.39□□□□□ -0.59
APOE-204ENST00000446996 LCE2CQ5TA81 110 aa11.39□□□□□ -0.59
APOE-204ENST00000446996 ZCCHC13Q8WW36 166 aaKnown RBP11.39□□□□□ -0.59
APOE-204ENST00000446996 KRTAP9-2Q9BYQ4 174 aa11.39□□□□□ -0.59
APOE-204ENST00000446996 FAM240AA0A1B0GVK7 77 aa11.35□□□□□ -0.59
APOE-204ENST00000446996 CXCL6P80162 114 aa11.33□□□□□ -0.6
APOE-204ENST00000446996 Q8N9L7 120 aa11.33□□□□□ -0.6
APOE-204ENST00000446996 CASC2Q6XLA1 102 aa11.29□□□□□ -0.6
APOE-204ENST00000446996 COX6B2Q6YFQ2 88 aa11.28□□□□□ -0.6
APOE-204ENST00000446996 WFDC13Q8IUB5 93 aa11.26□□□□□ -0.61
APOE-204ENST00000446996 HCG22E2RYF7 251 aa11.24□□□□□ -0.61
APOE-204ENST00000446996 NDUFS5O43920 106 aa11.23□□□□□ -0.61
APOE-204ENST00000446996 MT1HP80294 61 aa11.22□□□□□ -0.61
APOE-204ENST00000446996 HRES1P13985 223 aa11.21□□□□□ -0.61
APOE-204ENST00000446996 SPINK7P58062 85 aa11.2□□□□□ -0.62
APOE-204ENST00000446996 ATP5EP2Q5VTU8 51 aa11.19□□□□□ -0.62
APOE-204ENST00000446996 MPLKIPQ8TAP9 179 aa11.19□□□□□ -0.62
APOE-204ENST00000446996 RBM12B-AS1Q9P1G2 102 aa11.16□□□□□ -0.62
APOE-204ENST00000446996 FLGP20930 4061 aaPredicted RBP11.15□□□□□ -0.62
APOE-204ENST00000446996 J3QR89 54 aa11.12□□□□□ -0.63
APOE-204ENST00000446996 LINC00643Q86TS7 51 aa11.11□□□□□ -0.63
APOE-204ENST00000446996 Q5W150 140 aa11.09□□□□□ -0.63
APOE-204ENST00000446996 TP53AIP1Q9HCN2 124 aa11.07□□□□□ -0.64
APOE-204ENST00000446996 FAM236DA0A1B0GTK5 79 aa11.06□□□□□ -0.64
APOE-204ENST00000446996 FAM236CP0DP71 79 aa11.06□□□□□ -0.64
APOE-204ENST00000446996 KRTAP9-6A0A140TA67 174 aa11.05□□□□□ -0.64
APOE-204ENST00000446996 M0R2T5 61 aa11.02□□□□□ -0.65
APOE-204ENST00000446996 C7orf65Q6ZTY9 151 aa11.01□□□□□ -0.65
APOE-204ENST00000446996 HIST1H4AP62805 103 aaKnown RBP10.99□□□□□ -0.65
APOE-204ENST00000446996 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.65
APOE-204ENST00000446996 IGKV2-30P06310 120 aa10.96□□□□□ -0.65
APOE-204ENST00000446996 KRTAP10-6P60371 365 aaPredicted RBP10.96□□□□□ -0.65
APOE-204ENST00000446996 LORP23490 312 aaPredicted RBP10.94□□□□□ -0.66
APOE-204ENST00000446996 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
APOE-204ENST00000446996 FSIP2Q5CZC0 6907 aa10.88□□□□□ -0.67
APOE-204ENST00000446996 A0A087WVE0 104 aa10.85□□□□□ -0.67
APOE-204ENST00000446996 K7ERU9 68 aa10.84□□□□□ -0.67
APOE-204ENST00000446996 UQCRQO14949 82 aa10.83□□□□□ -0.68
APOE-204ENST00000446996 TRAV22A0A0B4J277 110 aa10.82□□□□□ -0.68
APOE-204ENST00000446996 H1FX-AS1Q4G0G2 97 aa10.79□□□□□ -0.68
APOE-204ENST00000446996 LOC101927531A0A1B0GV80 90 aa10.75□□□□□ -0.69
APOE-204ENST00000446996 ATOX1O00244 68 aa10.74□□□□□ -0.69
APOE-204ENST00000446996 C4orf26Q17RF5 130 aa10.74□□□□□ -0.69
APOE-204ENST00000446996 IMUPQ9GZP8 106 aa10.73□□□□□ -0.69
APOE-204ENST00000446996 CYP4F30PQ9H0H9 118 aa10.73□□□□□ -0.69
APOE-204ENST00000446996 CRCT1Q9UGL9 99 aa10.72□□□□□ -0.69
APOE-204ENST00000446996 H0Y9P7 68 aa10.69□□□□□ -0.7
APOE-204ENST00000446996 KRTAP9-8Q9BYQ0 159 aa10.69□□□□□ -0.7
APOE-204ENST00000446996 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
APOE-204ENST00000446996 C1orf64Q8NEQ6 169 aa10.63□□□□□ -0.71
APOE-204ENST00000446996 KRTAP3-1Q9BYR8 98 aa10.62□□□□□ -0.71
APOE-204ENST00000446996 MT-ATP8P03928 68 aa10.61□□□□□ -0.71
APOE-204ENST00000446996 C5orf47Q569G3 176 aa10.61□□□□□ -0.71
APOE-204ENST00000446996 SCGB1A1P11684 91 aa10.6□□□□□ -0.71
APOE-204ENST00000446996 MP68P56378 58 aa10.6□□□□□ -0.71
APOE-204ENST00000446996 MT2AP02795 61 aa10.56□□□□□ -0.72
APOE-204ENST00000446996 H3BPC8 53 aa10.55□□□□□ -0.72
APOE-204ENST00000446996 LINC00208Q96KT6 92 aa10.55□□□□□ -0.72
APOE-204ENST00000446996 SMIM20Q8N5G0 67 aa10.48□□□□□ -0.73
APOE-204ENST00000446996 S4R3F8 94 aa10.48□□□□□ -0.73
APOE-204ENST00000446996 MT1FP04733 61 aa10.46□□□□□ -0.73
APOE-204ENST00000446996 KRTAP10-10P60014 251 aa10.45□□□□□ -0.74
APOE-204ENST00000446996 FAM236AA0A1B0GUQ0 79 aa10.44□□□□□ -0.74
APOE-204ENST00000446996 FAM236BA0A1B0GV22 79 aa10.44□□□□□ -0.74
APOE-204ENST00000446996 KLKP1Q107X0 134 aa10.42□□□□□ -0.74
APOE-204ENST00000446996 TRAV7A0A075B6U4 112 aa10.4□□□□□ -0.74
APOE-204ENST00000446996 A8MUN3 132 aa10.4□□□□□ -0.74
APOE-204ENST00000446996 CSAG1Q6PB30 78 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms