RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
SIK3-205ENST00000446921 HECTD1Q9ULT8 2610 aa9.41□□□□□ -0.9
SIK3-205ENST00000446921 FLNBO75369 2602 aaKnown RBP9.38□□□□□ -0.91
SIK3-205ENST00000446921 IGSF10Q6WRI0 2623 aa9.37□□□□□ -0.91
SIK3-205ENST00000446921 FBN1P35555 2871 aaKnown RBP9.37□□□□□ -0.91
SIK3-205ENST00000446921 UBE2DNLQ8IWF7 75 aa9.37□□□□□ -0.91
SIK3-205ENST00000446921 LINC00304Q8N9R0 145 aa9.36□□□□□ -0.91
SIK3-205ENST00000446921 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
SIK3-205ENST00000446921 C14orf177Q52M58 125 aa9.34□□□□□ -0.91
SIK3-205ENST00000446921 SMR3AQ99954 134 aa9.33□□□□□ -0.92
SIK3-205ENST00000446921 NBEAL1Q6ZS30 2694 aa9.31□□□□□ -0.92
SIK3-205ENST00000446921 NUPR2A6NF83 97 aa9.31□□□□□ -0.92
SIK3-205ENST00000446921 Q8N1X5 172 aa9.29□□□□□ -0.92
SIK3-205ENST00000446921 MAST4O15021 2626 aa9.29□□□□□ -0.92
SIK3-205ENST00000446921 TENM2Q9NT68 2774 aa9.28□□□□□ -0.92
SIK3-205ENST00000446921 TENM3Q9P273 2699 aa9.27□□□□□ -0.93
SIK3-205ENST00000446921 COL7A1Q02388 2944 aa9.26□□□□□ -0.93
SIK3-205ENST00000446921 NSD1Q96L73 2696 aaPredicted RBP9.25□□□□□ -0.93
SIK3-205ENST00000446921 A0A1B0GU33 70 aa9.24□□□□□ -0.93
SIK3-205ENST00000446921 LY6G6CO95867 125 aa9.22□□□□□ -0.93
SIK3-205ENST00000446921 PSORS1C2Q9UIG4 136 aa9.22□□□□□ -0.93
SIK3-205ENST00000446921 KRTAP1-3Q8IUG1 177 aa9.21□□□□□ -0.94
SIK3-205ENST00000446921 ITPR2Q14571 2701 aa9.17□□□□□ -0.94
SIK3-205ENST00000446921 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
SIK3-205ENST00000446921 STAB2Q8WWQ8 2551 aa9.15□□□□□ -0.94
SIK3-205ENST00000446921 WWC2-AS2Q96NR7 200 aa9.14□□□□□ -0.95
SIK3-205ENST00000446921 H0YAA0 97 aa9.13□□□□□ -0.95
SIK3-205ENST00000446921 KRTAP13-3Q3SY46 172 aa9.13□□□□□ -0.95
SIK3-205ENST00000446921 TENM1Q9UKZ4 2725 aa9.13□□□□□ -0.95
SIK3-205ENST00000446921 Q6ZSA8 131 aa9.12□□□□□ -0.95
SIK3-205ENST00000446921 PANO1I0J062 215 aa9.11□□□□□ -0.95
SIK3-205ENST00000446921 KRTAP1-5Q9BYS1 174 aa9.08□□□□□ -0.96
SIK3-205ENST00000446921 KRTAP1-1Q07627 177 aa9.07□□□□□ -0.96
SIK3-205ENST00000446921 CSMD3Q7Z407 3707 aa9.07□□□□□ -0.96
SIK3-205ENST00000446921 KRTAP10-11P60412 298 aa9.07□□□□□ -0.96
SIK3-205ENST00000446921 A0A087WTM6 91 aa9.05□□□□□ -0.96
SIK3-205ENST00000446921 A0A0D9SG42 100 aa9.05□□□□□ -0.96
SIK3-205ENST00000446921 TGP01266 2768 aa9.04□□□□□ -0.96
SIK3-205ENST00000446921 SPACA4Q8TDM5 124 aa9.03□□□□□ -0.96
SIK3-205ENST00000446921 TYMSOSQ8TAI1 123 aa9.03□□□□□ -0.96
SIK3-205ENST00000446921 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
SIK3-205ENST00000446921 ZNF469Q96JG9 3925 aaPredicted RBP9.02□□□□□ -0.97
SIK3-205ENST00000446921 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
SIK3-205ENST00000446921 C10orf95Q9H7T3 257 aa9.01□□□□□ -0.97
SIK3-205ENST00000446921 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
SIK3-205ENST00000446921 APLNQ9ULZ1 77 aa8.99□□□□□ -0.97
SIK3-205ENST00000446921 MGAM2Q2M2H8 2515 aa8.98□□□□□ -0.97
SIK3-205ENST00000446921 TRRAPQ9Y4A5 3859 aa8.95□□□□□ -0.98
SIK3-205ENST00000446921 TENM4Q6N022 2769 aa8.9□□□□□ -0.98
SIK3-205ENST00000446921 SEC61BP60468 96 aaKnown RBP8.9□□□□□ -0.99
SIK3-205ENST00000446921 KMT2BQ9UMN6 2715 aaPredicted RBP8.89□□□□□ -0.99
SIK3-205ENST00000446921 NBDYA0A0U1RRE5 68 aa8.86□□□□□ -0.99
SIK3-205ENST00000446921 RPL37P61927 97 aaKnown RBP8.84□□□□□ -0.99
SIK3-205ENST00000446921 TPRXLQ17RH7 258 aa8.82□□□□□ -1
SIK3-205ENST00000446921 KRTAP15-1Q3LI76 137 aa8.81□□□□□ -1
SIK3-205ENST00000446921 ALMS1Q8TCU4 4167 aa8.81□□□□□ -1
SIK3-205ENST00000446921 COX6B2Q6YFQ2 88 aa8.77□□□□□ -1.01
SIK3-205ENST00000446921 MEGF8Q7Z7M0 2845 aa8.71□□□□□ -1.01
SIK3-205ENST00000446921 C9orf92A6NGG3 77 aa8.65□□□□□ -1.03
SIK3-205ENST00000446921 ANK3Q12955 4377 aaKnown RBP8.62□□□□□ -1.03
SIK3-205ENST00000446921 KRTAP24-1Q3LI83 254 aa8.61□□□□□ -1.03
SIK3-205ENST00000446921 J3QKU1 62 aa8.6□□□□□ -1.03
SIK3-205ENST00000446921 DNAH10Q8IVF4 4471 aa8.59□□□□□ -1.03
SIK3-205ENST00000446921 FBN3Q75N90 2809 aa8.54□□□□□ -1.04
SIK3-205ENST00000446921 KRTAP13-2Q52LG2 175 aa8.54□□□□□ -1.04
SIK3-205ENST00000446921 Q6ZRN7 208 aaPredicted RBP8.48□□□□□ -1.05
SIK3-205ENST00000446921 KRTAP3-1Q9BYR8 98 aa8.42□□□□□ -1.06
SIK3-205ENST00000446921 S4R3F8 94 aa8.41□□□□□ -1.06
SIK3-205ENST00000446921 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
SIK3-205ENST00000446921 LYSTQ99698 3801 aa8.38□□□□□ -1.07
SIK3-205ENST00000446921 KRTAP13-4Q3LI77 160 aa8.36□□□□□ -1.07
SIK3-205ENST00000446921 J3QL48 77 aa8.33□□□□□ -1.08
SIK3-205ENST00000446921 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
SIK3-205ENST00000446921 KRTAP12-2P59991 146 aa8.25□□□□□ -1.09
SIK3-205ENST00000446921 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
SIK3-205ENST00000446921 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
SIK3-205ENST00000446921 DNAH8Q96JB1 4490 aa8.21□□□□□ -1.1
SIK3-205ENST00000446921 ANK2Q01484 3957 aa8.2□□□□□ -1.1
SIK3-205ENST00000446921 DNAH9Q9NYC9 4486 aa8.18□□□□□ -1.1
SIK3-205ENST00000446921 DNAH1Q9P2D7 4330 aa8.16□□□□□ -1.1
SIK3-205ENST00000446921 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
SIK3-205ENST00000446921 KRTAP1-4P0C5Y4 121 aa8.14□□□□□ -1.11
SIK3-205ENST00000446921 DNAH17Q9UFH2 4485 aa8.12□□□□□ -1.11
SIK3-205ENST00000446921 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
SIK3-205ENST00000446921 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
SIK3-205ENST00000446921 KRTAP10-1P60331 282 aa8.04□□□□□ -1.12
SIK3-205ENST00000446921 XP32Q5T750 250 aa8.03□□□□□ -1.12
SIK3-205ENST00000446921 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
SIK3-205ENST00000446921 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
SIK3-205ENST00000446921 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
SIK3-205ENST00000446921 KRTAP3-3Q9BYR6 98 aa7.93□□□□□ -1.14
SIK3-205ENST00000446921 CMYA5Q8N3K9 4069 aa7.9□□□□□ -1.14
SIK3-205ENST00000446921 M0QZ58 72 aa7.89□□□□□ -1.15
SIK3-205ENST00000446921 PLECQ15149 4684 aaKnown RBP7.85□□□□□ -1.15
SIK3-205ENST00000446921 DNAH7Q8WXX0 4024 aa7.84□□□□□ -1.15
SIK3-205ENST00000446921 R4GN34 69 aa7.83□□□□□ -1.16
SIK3-205ENST00000446921 RPS29P62273 56 aaKnown RBP7.83□□□□□ -1.16
SIK3-205ENST00000446921 PRO2289Q9P1D8 64 aa7.76□□□□□ -1.17
SIK3-205ENST00000446921 DNAH11Q96DT5 4516 aa7.72□□□□□ -1.17
SIK3-205ENST00000446921 HECTD4Q9Y4D8 3996 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms